RNA–Protein interactions for RNA: ENST00000449098.5

HNRNPC-204, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HNRNPC, Length 1,599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-204ENST00000449098 NCOA1Q15788 1441 aa18.63■□□□□ 0.57
HNRNPC-204ENST00000449098 ERBINQ96RT1 1412 aa18.62■□□□□ 0.57
HNRNPC-204ENST00000449098 CLTCQ00610 1675 aaKnown RBP18.62■□□□□ 0.57
HNRNPC-204ENST00000449098 C3P01024 1663 aa18.62■□□□□ 0.57
HNRNPC-204ENST00000449098 UHRF1BP1Q6BDS2 1440 aa18.61■□□□□ 0.57
HNRNPC-204ENST00000449098 KDM5DQ9BY66 1539 aa18.61■□□□□ 0.57
HNRNPC-204ENST00000449098 PTPRKQ15262 1439 aa18.6■□□□□ 0.57
HNRNPC-204ENST00000449098 ADGRL2O95490 1459 aa18.6■□□□□ 0.57
HNRNPC-204ENST00000449098 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.572e-26■■□□□ 12.1
HNRNPC-204ENST00000449098 EIF2AK4Q9P2K8 1649 aaKnown RBP18.59■□□□□ 0.57
HNRNPC-204ENST00000449098 MROH2AA6NES4 1674 aa18.59■□□□□ 0.57
HNRNPC-204ENST00000449098 NPATQ14207 1427 aa18.58■□□□□ 0.56
HNRNPC-204ENST00000449098 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.58■□□□□ 0.56
HNRNPC-204ENST00000449098 RNF17Q9BXT8 1623 aaKnown RBP18.57■□□□□ 0.56
HNRNPC-204ENST00000449098 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
HNRNPC-204ENST00000449098 RRBP1Q9P2E9 1410 aaKnown RBP18.56■□□□□ 0.56
HNRNPC-204ENST00000449098 FBXO31Q5XUX0 539 aaPredicted RBP18.55■□□□□ 0.56
HNRNPC-204ENST00000449098 PREX1Q8TCU6 1659 aa18.55■□□□□ 0.56
HNRNPC-204ENST00000449098 ABCC3O15438 1527 aa18.54■□□□□ 0.56
HNRNPC-204ENST00000449098 ANKRD50Q9ULJ7 1429 aa18.54■□□□□ 0.56
HNRNPC-204ENST00000449098 ROCK1Q13464 1354 aa18.53■□□□□ 0.56
HNRNPC-204ENST00000449098 KANK1Q14678 1352 aa18.53■□□□□ 0.56
HNRNPC-204ENST00000449098 PZPP20742 1482 aa18.53■□□□□ 0.56
HNRNPC-204ENST00000449098 MROH1Q8NDA8 1641 aa18.53■□□□□ 0.56
HNRNPC-204ENST00000449098 PRDM15P57071 1507 aaPredicted RBP18.5■□□□□ 0.55
HNRNPC-204ENST00000449098 TNRQ92752 1358 aa18.5■□□□□ 0.55
HNRNPC-204ENST00000449098 ZC3H13Q5T200 1668 aaKnown RBP18.47■□□□□ 0.55
HNRNPC-204ENST00000449098 SETD1BQ9UPS6 1966 aaKnown RBP18.47■□□□□ 0.55
HNRNPC-204ENST00000449098 DEPDC5O75140 1603 aa18.45■□□□□ 0.54
HNRNPC-204ENST00000449098 MYO3AQ8NEV4 1616 aa18.45■□□□□ 0.54
HNRNPC-204ENST00000449098 CEP152O94986 1710 aa18.44■□□□□ 0.54
HNRNPC-204ENST00000449098 ERVK-7P63135 1459 aa18.43■□□□□ 0.54
HNRNPC-204ENST00000449098 CEP170BQ9Y4F5 1589 aaPredicted RBP18.43■□□□□ 0.54
HNRNPC-204ENST00000449098 CAMSAP1Q5T5Y3 1602 aa18.43■□□□□ 0.54
HNRNPC-204ENST00000449098 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
HNRNPC-204ENST00000449098 A2ML1A8K2U0 1454 aa18.42■□□□□ 0.54
HNRNPC-204ENST00000449098 ARHGAP31Q2M1Z3 1444 aa18.42■□□□□ 0.54
HNRNPC-204ENST00000449098 VWDEQ8N2E2 1590 aa18.41■□□□□ 0.54
HNRNPC-204ENST00000449098 LMTK2Q8IWU2 1503 aa18.4■□□□□ 0.54
HNRNPC-204ENST00000449098 SPATA31D1Q6ZQQ2 1576 aa18.4■□□□□ 0.54
HNRNPC-204ENST00000449098 DMRT2Q9Y5R5 561 aa18.39■□□□□ 0.53
HNRNPC-204ENST00000449098 NLRP1Q9C000 1473 aa18.39■□□□□ 0.53
HNRNPC-204ENST00000449098 NCKAP5LQ9HCH0 1330 aa18.38■□□□□ 0.53
HNRNPC-204ENST00000449098 NUP155O75694 1391 aa18.38■□□□□ 0.53
HNRNPC-204ENST00000449098 ZNF142P52746 1687 aaPredicted RBP18.38■□□□□ 0.53
HNRNPC-204ENST00000449098 NAIPQ13075 1403 aa18.36■□□□□ 0.53
HNRNPC-204ENST00000449098 UNC13BO14795 1591 aa18.36■□□□□ 0.53
HNRNPC-204ENST00000449098 EFCAB6Q5THR3 1501 aa18.36■□□□□ 0.53
HNRNPC-204ENST00000449098 THEMISQ8N1K5 641 aaPredicted RBP18.35■□□□□ 0.53
HNRNPC-204ENST00000449098 UGGT1Q9NYU2 1555 aa18.34■□□□□ 0.53
HNRNPC-204ENST00000449098 PLA2R1Q13018 1463 aa18.34■□□□□ 0.53
HNRNPC-204ENST00000449098 HFM1A2PYH4 1435 aa18.34■□□□□ 0.53
HNRNPC-204ENST00000449098 PKD2Q13563 968 aa18.34■□□□□ 0.53
HNRNPC-204ENST00000449098 STRCQ7RTU9 1775 aa18.32■□□□□ 0.52
HNRNPC-204ENST00000449098 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
HNRNPC-204ENST00000449098 PTPRTO14522 1441 aa18.31■□□□□ 0.52
HNRNPC-204ENST00000449098 RPRD2Q5VT52 1461 aaKnown RBP18.3■□□□□ 0.52
HNRNPC-204ENST00000449098 NOS1P29475 1434 aa18.3■□□□□ 0.52
HNRNPC-204ENST00000449098 ANKLE2Q86XL3 938 aa18.3■□□□□ 0.52
HNRNPC-204ENST00000449098 TRIM52Q96A61 297 aa18.3■□□□□ 0.52
HNRNPC-204ENST00000449098 TET3O43151 1660 aa18.29■□□□□ 0.52
HNRNPC-204ENST00000449098 IDI1Q13907 227 aa18.29■□□□□ 0.52
HNRNPC-204ENST00000449098 IQGAP3Q86VI3 1631 aa18.28■□□□□ 0.52
HNRNPC-204ENST00000449098 GCC2Q8IWJ2 1684 aa18.27■□□□□ 0.52
HNRNPC-204ENST00000449098 SLC52A1Q9NWF4 448 aa18.26■□□□□ 0.51
HNRNPC-204ENST00000449098 CFAP65Q6ZU64 1925 aaKnown RBP18.26■□□□□ 0.51
HNRNPC-204ENST00000449098 SYNMO15061 1565 aa18.26■□□□□ 0.51
HNRNPC-204ENST00000449098 CHGAP10645 457 aaKnown RBP18.22■□□□□ 0.51
HNRNPC-204ENST00000449098 PIK3C2BO00750 1634 aa18.22■□□□□ 0.51
HNRNPC-204ENST00000449098 TXNDC2Q86VQ3 553 aa18.21■□□□□ 0.51
HNRNPC-204ENST00000449098 EID1Q9Y6B2 187 aa18.21■□□□□ 0.51
HNRNPC-204ENST00000449098 E9PCH4 1651 aa18.21■□□□□ 0.51
HNRNPC-204ENST00000449098 SLC4A1APQ9BWU0 796 aaKnown RBP18.21■□□□□ 0.51
HNRNPC-204ENST00000449098 NPHP4O75161 1426 aaPredicted RBP18.2■□□□□ 0.5
HNRNPC-204ENST00000449098 UBR1Q8IWV7 1749 aa18.2■□□□□ 0.5
HNRNPC-204ENST00000449098 SENP3Q9H4L4 574 aaPredicted RBP18.2■□□□□ 0.5
HNRNPC-204ENST00000449098 ZNF335Q9H4Z2 1342 aaPredicted RBP18.2■□□□□ 0.5
HNRNPC-204ENST00000449098 TMEM2Q9UHN6 1383 aa18.2■□□□□ 0.5
HNRNPC-204ENST00000449098 NEURL4Q96JN8 1562 aa18.19■□□□□ 0.5
HNRNPC-204ENST00000449098 LTKP29376 864 aa18.19■□□□□ 0.5
HNRNPC-204ENST00000449098 CERKQ8TCT0 537 aa18.19■□□□□ 0.5
HNRNPC-204ENST00000449098 SCAF11Q99590 1463 aaKnown RBP18.19■□□□□ 0.5
HNRNPC-204ENST00000449098 ADGRB3O60242 1522 aa18.18■□□□□ 0.5
HNRNPC-204ENST00000449098 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
HNRNPC-204ENST00000449098 ARHGAP23Q9P227 1491 aa18.17■□□□□ 0.5
HNRNPC-204ENST00000449098 SLIT1O75093 1534 aa18.17■□□□□ 0.5
HNRNPC-204ENST00000449098 MED14O60244 1454 aa18.17■□□□□ 0.5
HNRNPC-204ENST00000449098 POLR1AO95602 1720 aaPredicted RBP18.16■□□□□ 0.5
HNRNPC-204ENST00000449098 ILDR1Q86SU0 546 aaPredicted RBP18.15■□□□□ 0.5
HNRNPC-204ENST00000449098 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
HNRNPC-204ENST00000449098 PPP1R15AO75807 674 aaPredicted RBP18.13■□□□□ 0.49
HNRNPC-204ENST00000449098 FOXD1Q16676 465 aa18.12■□□□□ 0.49
HNRNPC-204ENST00000449098 BCANQ96GW7 911 aa18.12■□□□□ 0.49
HNRNPC-204ENST00000449098 LTBP4Q8N2S1 1624 aa18.11■□□□□ 0.49
HNRNPC-204ENST00000449098 KDM5AP29375 1690 aaKnown RBP18.11■□□□□ 0.49
HNRNPC-204ENST00000449098 FBXO41Q8TF61 875 aa18.11■□□□□ 0.49
HNRNPC-204ENST00000449098 MPHOSPH9Q99550 1183 aa18.11■□□□□ 0.49
HNRNPC-204ENST00000449098 IQGAP1P46940 1657 aa18.1■□□□□ 0.49
HNRNPC-204ENST00000449098 HDGFP51858 240 aaKnown RBP18.1■□□□□ 0.49
HNRNPC-204ENST00000449098 RIMS2Q9UQ26 1411 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms