RNA–Protein interactions for RNA: ENST00000448497.1

RFC4-209, Transcript of replication factor C subunit 4, humanhuman

TSL 5

Gene RFC4, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-209ENST00000448497 ANKRD30AQ9BXX3 1397 aa10.11□□□□□ -0.79
RFC4-209ENST00000448497 ARHGAP5Q13017 1502 aa10.1□□□□□ -0.79
RFC4-209ENST00000448497 PLXNC1O60486 1568 aa10.09□□□□□ -0.79
RFC4-209ENST00000448497 C9orf84Q5VXU9 1444 aa10.09□□□□□ -0.79
RFC4-209ENST00000448497 SPOCK2Q92563 424 aa10.09□□□□□ -0.79
RFC4-209ENST00000448497 ABCC1P33527 1531 aa10.08□□□□□ -0.8
RFC4-209ENST00000448497 RRP7BPQ9NSQ0 103 aa10.08□□□□□ -0.8
RFC4-209ENST00000448497 CHIC2Q9UKJ5 165 aa10.08□□□□□ -0.8
RFC4-209ENST00000448497 DENND4BO75064 1496 aaPredicted RBP10.08□□□□□ -0.8
RFC4-209ENST00000448497 SYCP2Q9BX26 1530 aa10.07□□□□□ -0.8
RFC4-209ENST00000448497 KDM5DQ9BY66 1539 aa10.07□□□□□ -0.8
RFC4-209ENST00000448497 NPM1P06748 294 aaKnown RBP eCLIP10.06□□□□□ -0.8
RFC4-209ENST00000448497 PRKAR2AP13861 404 aaKnown RBP10.06□□□□□ -0.8
RFC4-209ENST00000448497 ASXL2Q76L83 1435 aa10.06□□□□□ -0.8
RFC4-209ENST00000448497 TSPY4P0CV99 314 aa10.05□□□□□ -0.8
RFC4-209ENST00000448497 TSPY10P0CW01 314 aa10.05□□□□□ -0.8
RFC4-209ENST00000448497 MNX1P50219 401 aaPredicted RBP10.05□□□□□ -0.8
RFC4-209ENST00000448497 EFCAB2Q5VUJ9 269 aa10.05□□□□□ -0.8
RFC4-209ENST00000448497 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
RFC4-209ENST00000448497 ZNF777Q9ULD5 760 aaPredicted RBP10.05□□□□□ -0.8
RFC4-209ENST00000448497 ANKRD50Q9ULJ7 1429 aa10.05□□□□□ -0.8
RFC4-209ENST00000448497 ZNF316A6NFI3 1004 aaPredicted RBP10.04□□□□□ -0.8
RFC4-209ENST00000448497 RTN4Q9NQC3 1192 aaKnown RBP10.04□□□□□ -0.8
RFC4-209ENST00000448497 CFAP74Q9C0B2 1584 aa10.04□□□□□ -0.8
RFC4-209ENST00000448497 PZPP20742 1482 aa10.04□□□□□ -0.8
RFC4-209ENST00000448497 ARHGEF12Q9NZN5 1544 aa10.03□□□□□ -0.8
RFC4-209ENST00000448497 RTEL1-TNFRSF6BF6WH68 1400 aa10.03□□□□□ -0.8
RFC4-209ENST00000448497 UNC13BO14795 1591 aa10.03□□□□□ -0.8
RFC4-209ENST00000448497 HNRNPMP52272 730 aaKnown RBP eCLIP10.02□□□□□ -0.81
RFC4-209ENST00000448497 CHADLQ6NUI6 762 aa10.02□□□□□ -0.81
RFC4-209ENST00000448497 MPHOSPH9Q99550 1183 aa10.02□□□□□ -0.81
RFC4-209ENST00000448497 RIMBP3CA6NJZ7 1639 aa10.02□□□□□ -0.81
RFC4-209ENST00000448497 RIMBP3BA6NNM3 1639 aa10.02□□□□□ -0.81
RFC4-209ENST00000448497 RIMBP3Q9UFD9 1639 aa10.02□□□□□ -0.81
RFC4-209ENST00000448497 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
RFC4-209ENST00000448497 KIF15Q9NS87 1388 aa10.01□□□□□ -0.81
RFC4-209ENST00000448497 KCNH8Q96L42 1107 aa10.01□□□□□ -0.81
RFC4-209ENST00000448497 FARP1Q9Y4F1 1045 aaPredicted RBP10.01□□□□□ -0.81
RFC4-209ENST00000448497 ANKRD30BQ9BXX2 1392 aa10.01□□□□□ -0.81
RFC4-209ENST00000448497 FANCAO15360 1455 aa10□□□□□ -0.81
RFC4-209ENST00000448497 INO80Q9ULG1 1556 aaPredicted RBP10□□□□□ -0.81
RFC4-209ENST00000448497 ERBINQ96RT1 1412 aa9.99□□□□□ -0.81
RFC4-209ENST00000448497 RPRD2Q5VT52 1461 aaKnown RBP9.99□□□□□ -0.81
RFC4-209ENST00000448497 MAGI2Q86UL8 1455 aa9.99□□□□□ -0.81
RFC4-209ENST00000448497 TRIM52Q96A61 297 aa9.99□□□□□ -0.81
RFC4-209ENST00000448497 GLI2P10070 1586 aa9.99□□□□□ -0.81
RFC4-209ENST00000448497 ZFYVE16Q7Z3T8 1539 aa9.98□□□□□ -0.81
RFC4-209ENST00000448497 IQGAP3Q86VI3 1631 aa9.98□□□□□ -0.81
RFC4-209ENST00000448497 PPP1R15AO75807 674 aaPredicted RBP9.98□□□□□ -0.81
RFC4-209ENST00000448497 SIN3AQ96ST3 1273 aa9.98□□□□□ -0.81
RFC4-209ENST00000448497 MAP3K4Q9Y6R4 1608 aa9.97□□□□□ -0.81
RFC4-209ENST00000448497 TONSLQ96HA7 1378 aa9.97□□□□□ -0.81
RFC4-209ENST00000448497 TRAPPC8Q9Y2L5 1435 aa9.97□□□□□ -0.81
RFC4-209ENST00000448497 DEPDC5O75140 1603 aa9.96□□□□□ -0.81
RFC4-209ENST00000448497 EIF2AK4Q9P2K8 1649 aaKnown RBP9.96□□□□□ -0.81
RFC4-209ENST00000448497 NEO1Q92859 1461 aa9.96□□□□□ -0.82
RFC4-209ENST00000448497 ATP7AQ04656 1500 aa9.96□□□□□ -0.82
RFC4-209ENST00000448497 NUBP1P53384 320 aa9.95□□□□□ -0.82
RFC4-209ENST00000448497 ADGRL1O94910 1474 aa9.95□□□□□ -0.82
RFC4-209ENST00000448497 FAM135AQ9P2D6 1515 aa9.95□□□□□ -0.82
RFC4-209ENST00000448497 KDM5CP41229 1560 aa9.95□□□□□ -0.82
RFC4-209ENST00000448497 ZNF518AQ6AHZ1 1483 aa9.94□□□□□ -0.82
RFC4-209ENST00000448497 CD109Q6YHK3 1445 aa9.94□□□□□ -0.82
RFC4-209ENST00000448497 NEUROD1Q13562 356 aa9.94□□□□□ -0.82
RFC4-209ENST00000448497 GSE1Q14687 1217 aa9.94□□□□□ -0.82
RFC4-209ENST00000448497 FAM212AQ96EL1 285 aa9.94□□□□□ -0.82
RFC4-209ENST00000448497 KIDINS220Q9ULH0 1771 aa9.93□□□□□ -0.82
RFC4-209ENST00000448497 BCORL1Q5H9F3 1711 aa9.93□□□□□ -0.82
RFC4-209ENST00000448497 TEX14Q8IWB6 1497 aa9.93□□□□□ -0.82
RFC4-209ENST00000448497 NUP155O75694 1391 aa9.93□□□□□ -0.82
RFC4-209ENST00000448497 ATP10AO60312 1499 aa9.92□□□□□ -0.82
RFC4-209ENST00000448497 SCAPERQ9BY12 1400 aa9.92□□□□□ -0.82
RFC4-209ENST00000448497 SPAG9O60271 1321 aaKnown RBP9.92□□□□□ -0.82
RFC4-209ENST00000448497 DIEXFQ68CQ4 756 aaKnown RBP9.92□□□□□ -0.82
RFC4-209ENST00000448497 VWDEQ8N2E2 1590 aa9.92□□□□□ -0.82
RFC4-209ENST00000448497 MLH3Q9UHC1 1453 aa9.91□□□□□ -0.82
RFC4-209ENST00000448497 POGZQ7Z3K3 1410 aa9.9□□□□□ -0.82
RFC4-209ENST00000448497 DIP2BQ9P265 1576 aa9.9□□□□□ -0.82
RFC4-209ENST00000448497 PKD2Q13563 968 aa9.9□□□□□ -0.82
RFC4-209ENST00000448497 TET3O43151 1660 aa9.9□□□□□ -0.83
RFC4-209ENST00000448497 RNF17Q9BXT8 1623 aaKnown RBP9.89□□□□□ -0.83
RFC4-209ENST00000448497 HECW2Q9P2P5 1572 aa9.89□□□□□ -0.83
RFC4-209ENST00000448497 CIZ1Q9ULV3 898 aaPredicted RBP9.89□□□□□ -0.83
RFC4-209ENST00000448497 RICTORQ6R327 1708 aa9.89□□□□□ -0.83
RFC4-209ENST00000448497 PRDM15P57071 1507 aaPredicted RBP9.88□□□□□ -0.83
RFC4-209ENST00000448497 AFAP1Q8N556 730 aa9.88□□□□□ -0.83
RFC4-209ENST00000448497 DHX29Q7Z478 1369 aaKnown RBP9.88□□□□□ -0.83
RFC4-209ENST00000448497 MROH1Q8NDA8 1641 aa9.87□□□□□ -0.83
RFC4-209ENST00000448497 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
RFC4-209ENST00000448497 DCAF8Q5TAQ9 597 aa9.87□□□□□ -0.83
RFC4-209ENST00000448497 RASEFQ8IZ41 740 aa9.87□□□□□ -0.83
RFC4-209ENST00000448497 UHRF1BP1Q6BDS2 1440 aa9.86□□□□□ -0.83
RFC4-209ENST00000448497 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
RFC4-209ENST00000448497 L3MBTL2Q969R5 705 aa9.86□□□□□ -0.83
RFC4-209ENST00000448497 E9PCH4 1651 aa9.86□□□□□ -0.83
RFC4-209ENST00000448497 PPRC1Q5VV67 1664 aaKnown RBP9.86□□□□□ -0.83
RFC4-209ENST00000448497 LMTK2Q8IWU2 1503 aa9.86□□□□□ -0.83
RFC4-209ENST00000448497 NEURL4Q96JN8 1562 aa9.85□□□□□ -0.83
RFC4-209ENST00000448497 ZMYM4Q5VZL5 1548 aa9.85□□□□□ -0.83
RFC4-209ENST00000448497 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms