RNA–Protein interactions for RNA: ENST00000448450.5

HTATSF1-203, Transcript of HIV-1 Tat specific factor 1, humanhuman

TSL 5

Gene HTATSF1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTATSF1-203ENST00000448450 SPATA31D1Q6ZQQ2 1576 aa38.91■■■■□ 3.82
HTATSF1-203ENST00000448450 MIA2Q96PC5 1412 aa38.9■■■■□ 3.82
HTATSF1-203ENST00000448450 ZNF335Q9H4Z2 1342 aaPredicted RBP38.89■■■■□ 3.82
HTATSF1-203ENST00000448450 RSPH4AQ5TD94 716 aa38.89■■■■□ 3.82
HTATSF1-203ENST00000448450 DHX29Q7Z478 1369 aaKnown RBP38.89■■■■□ 3.82
HTATSF1-203ENST00000448450 CCDC141Q6ZP82 1450 aa38.88■■■■□ 3.81
HTATSF1-203ENST00000448450 A2ML1A8K2U0 1454 aa38.86■■■■□ 3.81
HTATSF1-203ENST00000448450 FAM135AQ9P2D6 1515 aa38.84■■■■□ 3.81
HTATSF1-203ENST00000448450 DNMT1P26358 1616 aaKnown RBP38.83■■■■□ 3.81
HTATSF1-203ENST00000448450 TSPY4P0CV99 314 aa38.82■■■■□ 3.8
HTATSF1-203ENST00000448450 TSPY10P0CW01 314 aa38.82■■■■□ 3.8
HTATSF1-203ENST00000448450 KDM5DQ9BY66 1539 aa38.82■■■■□ 3.8
HTATSF1-203ENST00000448450 ILDR2Q71H61 639 aa38.81■■■■□ 3.8
HTATSF1-203ENST00000448450 PPARGC1BQ86YN6 1023 aaKnown RBP38.81■■■■□ 3.8
HTATSF1-203ENST00000448450 ARHGEF5Q12774 1597 aa38.81■■■■□ 3.8
HTATSF1-203ENST00000448450 KIF3BO15066 747 aa38.78■■■■□ 3.8
HTATSF1-203ENST00000448450 POLR1AO95602 1720 aaPredicted RBP38.77■■■■□ 3.8
HTATSF1-203ENST00000448450 PZPP20742 1482 aa38.76■■■■□ 3.8
HTATSF1-203ENST00000448450 PTPN23Q9H3S7 1636 aa38.76■■■■□ 3.8
HTATSF1-203ENST00000448450 FGD6Q6ZV73 1430 aa38.75■■■■□ 3.79
HTATSF1-203ENST00000448450 TNRQ92752 1358 aa38.75■■■■□ 3.79
HTATSF1-203ENST00000448450 UBAP1LF5GYI3 381 aa38.75■■■■□ 3.79
HTATSF1-203ENST00000448450 SOCS7O14512 581 aa38.69■■■■□ 3.78
HTATSF1-203ENST00000448450 WASHC2CQ9Y4E1 1318 aa38.68■■■■□ 3.78
HTATSF1-203ENST00000448450 FBXO31Q5XUX0 539 aaPredicted RBP38.68■■■■□ 3.78
HTATSF1-203ENST00000448450 NEURL4Q96JN8 1562 aa38.66■■■■□ 3.78
HTATSF1-203ENST00000448450 FAM50AQ14320 339 aaKnown RBP38.62■■■■□ 3.77
HTATSF1-203ENST00000448450 ABCC5O15440 1437 aa38.61■■■■□ 3.77
HTATSF1-203ENST00000448450 NLRP1Q9C000 1473 aa38.6■■■■□ 3.77
HTATSF1-203ENST00000448450 CPS1P31327 1500 aa38.59■■■■□ 3.77
HTATSF1-203ENST00000448450 MAST1Q9Y2H9 1570 aa38.59■■■■□ 3.77
HTATSF1-203ENST00000448450 RNF17Q9BXT8 1623 aaKnown RBP38.56■■■■□ 3.76
HTATSF1-203ENST00000448450 UGGT1Q9NYU2 1555 aa38.56■■■■□ 3.76
HTATSF1-203ENST00000448450 ZC3H13Q5T200 1668 aaKnown RBP38.55■■■■□ 3.76
HTATSF1-203ENST00000448450 DAPK1P53355 1430 aa38.55■■■■□ 3.76
HTATSF1-203ENST00000448450 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.54■■■■□ 3.76
HTATSF1-203ENST00000448450 SHANK2Q9UPX8 1470 aa38.54■■■■□ 3.76
HTATSF1-203ENST00000448450 ANKLE2Q86XL3 938 aa38.53■■■■□ 3.76
HTATSF1-203ENST00000448450 THEMISQ8N1K5 641 aaPredicted RBP38.53■■■■□ 3.76
HTATSF1-203ENST00000448450 CHIC2Q9UKJ5 165 aa38.52■■■■□ 3.76
HTATSF1-203ENST00000448450 DEPDC5O75140 1603 aa38.51■■■■□ 3.76
HTATSF1-203ENST00000448450 EIF2AK4Q9P2K8 1649 aaKnown RBP38.5■■■■□ 3.75
HTATSF1-203ENST00000448450 CROCC2H7BZ55 1655 aa38.49■■■■□ 3.75
HTATSF1-203ENST00000448450 RRP7BPQ9NSQ0 103 aa38.48■■■■□ 3.75
HTATSF1-203ENST00000448450 ABCC3O15438 1527 aa38.48■■■■□ 3.75
HTATSF1-203ENST00000448450 VWDEQ8N2E2 1590 aa38.45■■■■□ 3.75
HTATSF1-203ENST00000448450 MED14O60244 1454 aa38.45■■■■□ 3.75
HTATSF1-203ENST00000448450 SCAF1Q9H7N4 1312 aaKnown RBP38.44■■■■□ 3.74
HTATSF1-203ENST00000448450 NPHP4O75161 1426 aaPredicted RBP38.44■■■■□ 3.74
HTATSF1-203ENST00000448450 TOM1O60784 492 aa38.43■■■■□ 3.74
HTATSF1-203ENST00000448450 IQGAP1P46940 1657 aa38.42■■■■□ 3.74
HTATSF1-203ENST00000448450 KIF15Q9NS87 1388 aa38.41■■■■□ 3.74
HTATSF1-203ENST00000448450 PIP4K2BP78356 416 aa38.39■■■■□ 3.74
HTATSF1-203ENST00000448450 MROH1Q8NDA8 1641 aa38.38■■■■□ 3.73
HTATSF1-203ENST00000448450 ERVK-7P63135 1459 aa38.37■■■■□ 3.73
HTATSF1-203ENST00000448450 DUOX2Q9NRD8 1548 aa38.37■■■■□ 3.73
HTATSF1-203ENST00000448450 CEP152O94986 1710 aa38.36■■■■□ 3.73
HTATSF1-203ENST00000448450 ANKRD30AQ9BXX3 1397 aa38.35■■■■□ 3.73
HTATSF1-203ENST00000448450 HSPA1LP34931 641 aa38.33■■■■□ 3.73
HTATSF1-203ENST00000448450 ITGAEP38570 1179 aa38.3■■■■□ 3.72
HTATSF1-203ENST00000448450 MED1Q15648 1581 aaPredicted RBP38.27■■■■□ 3.72
HTATSF1-203ENST00000448450 UBR1Q8IWV7 1749 aa38.27■■■■□ 3.72
HTATSF1-203ENST00000448450 CFAP65Q6ZU64 1925 aaKnown RBP38.27■■■■□ 3.72
HTATSF1-203ENST00000448450 SYNMO15061 1565 aa38.25■■■■□ 3.71
HTATSF1-203ENST00000448450 STRCP1A6NGW2 1772 aa38.23■■■■□ 3.71
HTATSF1-203ENST00000448450 PRDM15P57071 1507 aaPredicted RBP38.22■■■■□ 3.71
HTATSF1-203ENST00000448450 ADGRL2O95490 1459 aa38.22■■■■□ 3.71
HTATSF1-203ENST00000448450 ERBINQ96RT1 1412 aa38.22■■■■□ 3.71
HTATSF1-203ENST00000448450 ALKQ9UM73 1620 aa38.21■■■■□ 3.71
HTATSF1-203ENST00000448450 GRWD1Q9BQ67 446 aaKnown RBP eCLIP38.2■■■■□ 3.712e-8■■■■■ 27.2
HTATSF1-203ENST00000448450 LRRC7Q96NW7 1537 aa38.17■■■■□ 3.7
HTATSF1-203ENST00000448450 SCAF11Q99590 1463 aaKnown RBP38.17■■■■□ 3.7
HTATSF1-203ENST00000448450 ARHGAP31Q2M1Z3 1444 aa38.15■■■■□ 3.7
HTATSF1-203ENST00000448450 RRBP1Q9P2E9 1410 aaKnown RBP38.12■■■■□ 3.69
HTATSF1-203ENST00000448450 SLIT1O75093 1534 aa38.12■■■■□ 3.69
HTATSF1-203ENST00000448450 ARHGAP23Q9P227 1491 aa38.1■■■■□ 3.69
HTATSF1-203ENST00000448450 ANKRD50Q9ULJ7 1429 aa38.08■■■■□ 3.69
HTATSF1-203ENST00000448450 ROCK1Q13464 1354 aa38.06■■■■□ 3.68
HTATSF1-203ENST00000448450 PIK3C2BO00750 1634 aa38.05■■■■□ 3.68
HTATSF1-203ENST00000448450 KANK1Q14678 1352 aa38.04■■■■□ 3.68
HTATSF1-203ENST00000448450 TXNDC2Q86VQ3 553 aa38.03■■■■□ 3.68
HTATSF1-203ENST00000448450 LTKP29376 864 aa38.02■■■■□ 3.68
HTATSF1-203ENST00000448450 EID1Q9Y6B2 187 aa38.01■■■■□ 3.68
HTATSF1-203ENST00000448450 PHF23Q9BUL5 403 aaPredicted RBP37.99■■■■□ 3.67
HTATSF1-203ENST00000448450 KDM5AP29375 1690 aaKnown RBP37.98■■■■□ 3.67
HTATSF1-203ENST00000448450 SENP3Q9H4L4 574 aaPredicted RBP37.95■■■■□ 3.67
HTATSF1-203ENST00000448450 TMEM2Q9UHN6 1383 aa37.94■■■■□ 3.66
HTATSF1-203ENST00000448450 XIRP1Q702N8 1843 aaKnown RBP37.94■■■■□ 3.66
HTATSF1-203ENST00000448450 LMTK2Q8IWU2 1503 aa37.94■■■■□ 3.66
HTATSF1-203ENST00000448450 STAG3Q9UJ98 1225 aa37.94■■■■□ 3.66
HTATSF1-203ENST00000448450 EFCAB6Q5THR3 1501 aa37.92■■■■□ 3.66
HTATSF1-203ENST00000448450 IDI1Q13907 227 aa37.81■■■■□ 3.64
HTATSF1-203ENST00000448450 ADGRB3O60242 1522 aa37.8■■■■□ 3.64
HTATSF1-203ENST00000448450 UNC13BO14795 1591 aa37.78■■■■□ 3.64
HTATSF1-203ENST00000448450 NOS1P29475 1434 aa37.78■■■■□ 3.64
HTATSF1-203ENST00000448450 TET3O43151 1660 aa37.76■■■■□ 3.63
HTATSF1-203ENST00000448450 NUP155O75694 1391 aa37.74■■■■□ 3.63
HTATSF1-203ENST00000448450 TMEM94Q12767 1356 aa37.74■■■■□ 3.63
HTATSF1-203ENST00000448450 NAIPQ13075 1403 aa37.73■■■■□ 3.63
HTATSF1-203ENST00000448450 FAM135BQ49AJ0 1406 aa37.72■■■■□ 3.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms