RNA–Protein interactions for RNA: ENST00000448282.6

SMIM8-205, Transcript of small integral membrane protein 8, humanhuman

TSL 1 (best)

Gene SMIM8, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-205ENST00000448282 CCER1Q8TC90 406 aaPredicted RBP17.48■□□□□ 0.39
SMIM8-205ENST00000448282 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
SMIM8-205ENST00000448282 KDM6BO15054 1643 aa17.47■□□□□ 0.39
SMIM8-205ENST00000448282 ATP10AO60312 1499 aa17.46■□□□□ 0.39
SMIM8-205ENST00000448282 YEATS2Q9ULM3 1422 aa17.44■□□□□ 0.38
SMIM8-205ENST00000448282 DIP2CQ9Y2E4 1556 aa17.44■□□□□ 0.38
SMIM8-205ENST00000448282 CLSPNQ9HAW4 1339 aa17.43■□□□□ 0.38
SMIM8-205ENST00000448282 ABCA6Q8N139 1617 aa17.43■□□□□ 0.38
SMIM8-205ENST00000448282 EIF2AK4Q9P2K8 1649 aaKnown RBP17.43■□□□□ 0.38
SMIM8-205ENST00000448282 NUP155O75694 1391 aa17.42■□□□□ 0.38
SMIM8-205ENST00000448282 KANK1Q14678 1352 aa17.42■□□□□ 0.38
SMIM8-205ENST00000448282 KIF3BO15066 747 aa17.42■□□□□ 0.38
SMIM8-205ENST00000448282 DHX57Q6P158 1386 aaKnown RBP17.41■□□□□ 0.38
SMIM8-205ENST00000448282 CACNB1Q02641 598 aaPredicted RBP17.41■□□□□ 0.38
SMIM8-205ENST00000448282 ARHGEF40Q8TER5 1519 aa17.41■□□□□ 0.38
SMIM8-205ENST00000448282 REREQ9P2R6 1566 aa17.4■□□□□ 0.38
SMIM8-205ENST00000448282 MPHOSPH9Q99550 1183 aa17.39■□□□□ 0.37
SMIM8-205ENST00000448282 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
SMIM8-205ENST00000448282 KDM5DQ9BY66 1539 aa17.38■□□□□ 0.37
SMIM8-205ENST00000448282 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.38■□□□□ 0.371e-6■■□□□ 12.2
SMIM8-205ENST00000448282 AGLP35573 1532 aa17.37■□□□□ 0.37
SMIM8-205ENST00000448282 UNC13BO14795 1591 aa17.37■□□□□ 0.37
SMIM8-205ENST00000448282 BCORL1Q5H9F3 1711 aa17.34■□□□□ 0.37
SMIM8-205ENST00000448282 PZPP20742 1482 aa17.33■□□□□ 0.37
SMIM8-205ENST00000448282 ZEB1P37275 1124 aaPredicted RBP17.33■□□□□ 0.36
SMIM8-205ENST00000448282 GGT6Q6P531 493 aa17.33■□□□□ 0.36
SMIM8-205ENST00000448282 DEPDC5O75140 1603 aa17.32■□□□□ 0.36
SMIM8-205ENST00000448282 RNF17Q9BXT8 1623 aaKnown RBP17.32■□□□□ 0.36
SMIM8-205ENST00000448282 PRDM15P57071 1507 aaPredicted RBP17.32■□□□□ 0.36
SMIM8-205ENST00000448282 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
SMIM8-205ENST00000448282 ARID4BQ4LE39 1312 aaPredicted RBP17.3■□□□□ 0.36
SMIM8-205ENST00000448282 IQGAP3Q86VI3 1631 aa17.3■□□□□ 0.36
SMIM8-205ENST00000448282 PKD2Q13563 968 aa17.3■□□□□ 0.36
SMIM8-205ENST00000448282 WASHC2CQ9Y4E1 1318 aa17.29■□□□□ 0.36
SMIM8-205ENST00000448282 VWDEQ8N2E2 1590 aa17.28■□□□□ 0.36
SMIM8-205ENST00000448282 LMTK2Q8IWU2 1503 aa17.27■□□□□ 0.36
SMIM8-205ENST00000448282 ESF1Q9H501 851 aaKnown RBP17.27■□□□□ 0.36
SMIM8-205ENST00000448282 MROH1Q8NDA8 1641 aa17.25■□□□□ 0.35
SMIM8-205ENST00000448282 ABCC3O15438 1527 aa17.22■□□□□ 0.35
SMIM8-205ENST00000448282 ANKRD30BQ9BXX2 1392 aa17.22■□□□□ 0.35
SMIM8-205ENST00000448282 TET3O43151 1660 aa17.22■□□□□ 0.35
SMIM8-205ENST00000448282 ZC3H13Q5T200 1668 aaKnown RBP17.22■□□□□ 0.35
SMIM8-205ENST00000448282 RPRD2Q5VT52 1461 aaKnown RBP17.21■□□□□ 0.35
SMIM8-205ENST00000448282 MLECQ14165 292 aa17.21■□□□□ 0.35
SMIM8-205ENST00000448282 TIMELESSQ9UNS1 1208 aa17.21■□□□□ 0.35
SMIM8-205ENST00000448282 CNTLNQ9NXG0 1405 aa17.21■□□□□ 0.34
SMIM8-205ENST00000448282 EFCAB6Q5THR3 1501 aa17.2■□□□□ 0.34
SMIM8-205ENST00000448282 ARHGAP31Q2M1Z3 1444 aa17.2■□□□□ 0.34
SMIM8-205ENST00000448282 NEUROD1Q13562 356 aa17.16■□□□□ 0.34
SMIM8-205ENST00000448282 CCDC144AA2RUR9 1427 aa17.15■□□□□ 0.34
SMIM8-205ENST00000448282 PTPRTO14522 1441 aa17.15■□□□□ 0.34
SMIM8-205ENST00000448282 NPATQ14207 1427 aa17.14■□□□□ 0.33
SMIM8-205ENST00000448282 SIN3AQ96ST3 1273 aa17.14■□□□□ 0.33
SMIM8-205ENST00000448282 CAMSAP1Q5T5Y3 1602 aa17.13■□□□□ 0.33
SMIM8-205ENST00000448282 TONSLQ96HA7 1378 aa17.13■□□□□ 0.33
SMIM8-205ENST00000448282 SIGLEC1Q9BZZ2 1709 aa17.13■□□□□ 0.33
SMIM8-205ENST00000448282 CEP152O94986 1710 aa17.12■□□□□ 0.33
SMIM8-205ENST00000448282 E9PCH4 1651 aa17.11■□□□□ 0.33
SMIM8-205ENST00000448282 TRPM2O94759 1503 aa17.11■□□□□ 0.33
SMIM8-205ENST00000448282 ZMYM3Q14202 1370 aa17.1■□□□□ 0.33
SMIM8-205ENST00000448282 PLA2R1Q13018 1463 aa17.1■□□□□ 0.33
SMIM8-205ENST00000448282 NOS1P29475 1434 aa17.08■□□□□ 0.32
SMIM8-205ENST00000448282 SLC52A1Q9NWF4 448 aa17.08■□□□□ 0.32
SMIM8-205ENST00000448282 CLTCQ00610 1675 aaKnown RBP17.07■□□□□ 0.32
SMIM8-205ENST00000448282 SPHKAPQ2M3C7 1700 aa17.05■□□□□ 0.32
SMIM8-205ENST00000448282 MROH2AA6NES4 1674 aa17.05■□□□□ 0.32
SMIM8-205ENST00000448282 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
SMIM8-205ENST00000448282 DCAF8L1A6NGE4 600 aa17.03■□□□□ 0.32
SMIM8-205ENST00000448282 STAC3Q96MF2 364 aa17.02■□□□□ 0.32
SMIM8-205ENST00000448282 FBXO31Q5XUX0 539 aaPredicted RBP17.01■□□□□ 0.31
SMIM8-205ENST00000448282 SPATA31D1Q6ZQQ2 1576 aa17.01■□□□□ 0.31
SMIM8-205ENST00000448282 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
SMIM8-205ENST00000448282 L3MBTL2Q969R5 705 aa17■□□□□ 0.31
SMIM8-205ENST00000448282 NEURL4Q96JN8 1562 aa17■□□□□ 0.31
SMIM8-205ENST00000448282 TNRQ92752 1358 aa17■□□□□ 0.31
SMIM8-205ENST00000448282 ADAMTSL3P82987 1691 aa16.99■□□□□ 0.31
SMIM8-205ENST00000448282 PREX1Q8TCU6 1659 aa16.99■□□□□ 0.31
SMIM8-205ENST00000448282 PPP1R15AO75807 674 aaPredicted RBP16.98■□□□□ 0.31
SMIM8-205ENST00000448282 CLTCL1P53675 1640 aa16.98■□□□□ 0.31
SMIM8-205ENST00000448282 RPGRIP1LQ68CZ1 1315 aa16.97■□□□□ 0.31
SMIM8-205ENST00000448282 SPATA31E1Q6ZUB1 1445 aa16.97■□□□□ 0.31
SMIM8-205ENST00000448282 MADDQ8WXG6 1647 aa16.97■□□□□ 0.31
SMIM8-205ENST00000448282 CHGAP10645 457 aaKnown RBP16.97■□□□□ 0.31
SMIM8-205ENST00000448282 IDI1Q13907 227 aa16.97■□□□□ 0.31
SMIM8-205ENST00000448282 STAG3Q9UJ98 1225 aa16.97■□□□□ 0.31
SMIM8-205ENST00000448282 SYNMO15061 1565 aa16.97■□□□□ 0.31
SMIM8-205ENST00000448282 RGL3Q3MIN7 710 aa16.96■□□□□ 0.31
SMIM8-205ENST00000448282 NLRP1Q9C000 1473 aa16.95■□□□□ 0.3
SMIM8-205ENST00000448282 PIK3C2BO00750 1634 aa16.95■□□□□ 0.3
SMIM8-205ENST00000448282 UGGT1Q9NYU2 1555 aa16.94■□□□□ 0.3
SMIM8-205ENST00000448282 CEBPAP49715 358 aaPredicted RBP16.94■□□□□ 0.3
SMIM8-205ENST00000448282 ZNF326Q5BKZ1 582 aaKnown RBP16.94■□□□□ 0.3
SMIM8-205ENST00000448282 DCAF11Q8TEB1 546 aa16.94■□□□□ 0.3
SMIM8-205ENST00000448282 RIMS1Q86UR5 1692 aaKnown RBP16.93■□□□□ 0.3
SMIM8-205ENST00000448282 ADGRB3O60242 1522 aa16.92■□□□□ 0.3
SMIM8-205ENST00000448282 C3P01024 1663 aa16.91■□□□□ 0.3
SMIM8-205ENST00000448282 HDGFP51858 240 aaKnown RBP16.91■□□□□ 0.3
SMIM8-205ENST00000448282 PTPRMP28827 1452 aa16.9■□□□□ 0.3
SMIM8-205ENST00000448282 KIF1BO60333 1816 aa16.89■□□□□ 0.29
SMIM8-205ENST00000448282 KDM2AQ9Y2K7 1162 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1012.3 ms