RNA–Protein interactions for RNA: ENST00000447480.5

TRIM4-204, Transcript of tripartite motif containing 4, humanhuman

TSL 3

Gene TRIM4, Length 639 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-204ENST00000447480 MIA2Q96PC5 1412 aa10.87□□□□□ -0.67
TRIM4-204ENST00000447480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRIM4-204ENST00000447480 NCOA2Q15596 1464 aa10.87□□□□□ -0.67
TRIM4-204ENST00000447480 EFCAB2Q5VUJ9 269 aa10.86□□□□□ -0.67
TRIM4-204ENST00000447480 PLCH2O75038 1416 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 ARHGAP5Q13017 1502 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 CDC42BPAQ5VT25 1732 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 GALR2O43603 387 aaPredicted RBP10.85□□□□□ -0.67
TRIM4-204ENST00000447480 CLCN6P51797 869 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
TRIM4-204ENST00000447480 KIF12Q96FN5 646 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 ANP32EQ9BTT0 268 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 TTC37Q6PGP7 1564 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 TSPOAP1O95153 1857 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 MYOM3Q5VTT5 1437 aa10.84□□□□□ -0.67
TRIM4-204ENST00000447480 FANCAO15360 1455 aa10.83□□□□□ -0.68
TRIM4-204ENST00000447480 GSE1Q14687 1217 aa10.83□□□□□ -0.68
TRIM4-204ENST00000447480 CFDP1Q9UEE9 299 aaPredicted RBP10.83□□□□□ -0.68
TRIM4-204ENST00000447480 MS4A3Q96HJ5 214 aa10.82□□□□□ -0.68
TRIM4-204ENST00000447480 CIZ1Q9ULV3 898 aaPredicted RBP10.82□□□□□ -0.68
TRIM4-204ENST00000447480 CDC42BPBQ9Y5S2 1711 aa10.81□□□□□ -0.68
TRIM4-204ENST00000447480 GPATCH8Q9UKJ3 1502 aaKnown RBP10.81□□□□□ -0.68
TRIM4-204ENST00000447480 MAP3K13O43283 966 aa10.81□□□□□ -0.68
TRIM4-204ENST00000447480 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRIM4-204ENST00000447480 PYGBP11216 843 aa10.8□□□□□ -0.68
TRIM4-204ENST00000447480 TIMELESSQ9UNS1 1208 aa10.8□□□□□ -0.68
TRIM4-204ENST00000447480 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
TRIM4-204ENST00000447480 KIAA1107Q9UPP5 1409 aa10.8□□□□□ -0.68
TRIM4-204ENST00000447480 ADGRL1O94910 1474 aa10.79□□□□□ -0.68
TRIM4-204ENST00000447480 AKNAQ7Z591 1439 aa10.78□□□□□ -0.68
TRIM4-204ENST00000447480 KANK4Q5T7N3 995 aaPredicted RBP10.78□□□□□ -0.68
TRIM4-204ENST00000447480 PTPN23Q9H3S7 1636 aa10.77□□□□□ -0.68
TRIM4-204ENST00000447480 FGD6Q6ZV73 1430 aa10.77□□□□□ -0.68
TRIM4-204ENST00000447480 ZNF518AQ6AHZ1 1483 aa10.77□□□□□ -0.69
TRIM4-204ENST00000447480 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
TRIM4-204ENST00000447480 PPRC1Q5VV67 1664 aaKnown RBP10.76□□□□□ -0.69
TRIM4-204ENST00000447480 DENND4BO75064 1496 aaPredicted RBP10.76□□□□□ -0.69
TRIM4-204ENST00000447480 ABCC1P33527 1531 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 PCDHB13Q9Y5F0 798 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 ARHGEF5Q12774 1597 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 KDM6BO15054 1643 aa10.76□□□□□ -0.69
TRIM4-204ENST00000447480 MAGI2Q86UL8 1455 aa10.75□□□□□ -0.69
TRIM4-204ENST00000447480 TSPY4P0CV99 314 aa10.75□□□□□ -0.69
TRIM4-204ENST00000447480 TSPY10P0CW01 314 aa10.75□□□□□ -0.69
TRIM4-204ENST00000447480 YTHDC1Q96MU7 727 aaKnown RBP10.75□□□□□ -0.69
TRIM4-204ENST00000447480 CAMSAP2Q08AD1 1489 aa10.74□□□□□ -0.69
TRIM4-204ENST00000447480 TCOF1Q13428 1488 aaKnown RBP10.74□□□□□ -0.69
TRIM4-204ENST00000447480 DCBLD2Q96PD2 775 aa10.74□□□□□ -0.69
TRIM4-204ENST00000447480 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
TRIM4-204ENST00000447480 CCDC141Q6ZP82 1450 aa10.74□□□□□ -0.69
TRIM4-204ENST00000447480 POTEIP0CG38 1075 aa10.73□□□□□ -0.69
TRIM4-204ENST00000447480 SCAPERQ9BY12 1400 aa10.73□□□□□ -0.69
TRIM4-204ENST00000447480 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
TRIM4-204ENST00000447480 SAMD9LQ8IVG5 1584 aa10.73□□□□□ -0.69
TRIM4-204ENST00000447480 IFNL1Q8IU54 200 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 TSHZ2Q9NRE2 1034 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 DHX57Q6P158 1386 aaKnown RBP10.72□□□□□ -0.69
TRIM4-204ENST00000447480 POGZQ7Z3K3 1410 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 SHANK2Q9UPX8 1470 aa10.72□□□□□ -0.69
TRIM4-204ENST00000447480 RTEL1-TNFRSF6BF6WH68 1400 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 DNMT1P26358 1616 aaKnown RBP10.71□□□□□ -0.69
TRIM4-204ENST00000447480 ZMYM4Q5VZL5 1548 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 RICTORQ6R327 1708 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 SGIP1Q9BQI5 828 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
TRIM4-204ENST00000447480 HECW2Q9P2P5 1572 aa10.7□□□□□ -0.7
TRIM4-204ENST00000447480 FAM50AQ14320 339 aaKnown RBP10.7□□□□□ -0.7
TRIM4-204ENST00000447480 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 ADGBQ8N7X0 1667 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 KDM5CP41229 1560 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 MAST1Q9Y2H9 1570 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 CHRM1P11229 460 aaPredicted RBP10.69□□□□□ -0.7
TRIM4-204ENST00000447480 ERICH6BQ5W0A0 696 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 PCDHB8Q9UN66 801 aa10.69□□□□□ -0.7
TRIM4-204ENST00000447480 MLH3Q9UHC1 1453 aa10.68□□□□□ -0.7
TRIM4-204ENST00000447480 SPAG9O60271 1321 aaKnown RBP10.68□□□□□ -0.7
TRIM4-204ENST00000447480 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
TRIM4-204ENST00000447480 ANKRD30AQ9BXX3 1397 aa10.67□□□□□ -0.7
TRIM4-204ENST00000447480 PLXNC1O60486 1568 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 ZFYVE16Q7Z3T8 1539 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 MBD5Q9P267 1494 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 DAPK1P53355 1430 aa10.66□□□□□ -0.7
TRIM4-204ENST00000447480 ROCK1Q13464 1354 aa10.65□□□□□ -0.7
TRIM4-204ENST00000447480 ATP7AQ04656 1500 aa10.65□□□□□ -0.7
TRIM4-204ENST00000447480 C9orf84Q5VXU9 1444 aa10.65□□□□□ -0.7
TRIM4-204ENST00000447480 REREQ9P2R6 1566 aa10.65□□□□□ -0.71
TRIM4-204ENST00000447480 INO80Q9ULG1 1556 aaPredicted RBP10.65□□□□□ -0.71
TRIM4-204ENST00000447480 BMP2KQ9NSY1 1161 aaPredicted RBP10.64□□□□□ -0.71
TRIM4-204ENST00000447480 ARHGEF40Q8TER5 1519 aa10.63□□□□□ -0.71
TRIM4-204ENST00000447480 ADGRL2O95490 1459 aa10.63□□□□□ -0.71
TRIM4-204ENST00000447480 ATMINO43313 823 aaPredicted RBP10.63□□□□□ -0.71
TRIM4-204ENST00000447480 NEFLP07196 543 aa10.63□□□□□ -0.71
TRIM4-204ENST00000447480 HNRNPMP52272 730 aaKnown RBP eCLIP10.63□□□□□ -0.71
TRIM4-204ENST00000447480 TIE1P35590 1138 aa10.62□□□□□ -0.71
TRIM4-204ENST00000447480 ASTLQ6HA08 431 aaPredicted RBP10.62□□□□□ -0.71
TRIM4-204ENST00000447480 ZNF467Q7Z7K2 595 aaPredicted RBP10.62□□□□□ -0.71
TRIM4-204ENST00000447480 DUOX2Q9NRD8 1548 aa10.62□□□□□ -0.71
TRIM4-204ENST00000447480 EIF2AK4Q9P2K8 1649 aaKnown RBP10.62□□□□□ -0.71
TRIM4-204ENST00000447480 ATP10AO60312 1499 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms