RNA–Protein interactions for RNA: ENST00000447379.1

NEK6-210, Transcript of NIMA related kinase 6, humanhuman

TSL 5

Gene NEK6, Length 716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-210ENST00000447379 NCOA1Q15788 1441 aa25.36■■□□□ 1.65
NEK6-210ENST00000447379 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.35■■□□□ 1.65
NEK6-210ENST00000447379 EIF2AK4Q9P2K8 1649 aaKnown RBP25.35■■□□□ 1.65
NEK6-210ENST00000447379 ADGRL2O95490 1459 aa25.34■■□□□ 1.65
NEK6-210ENST00000447379 LMTK3Q96Q04 1460 aa25.34■■□□□ 1.65
NEK6-210ENST00000447379 RNF17Q9BXT8 1623 aaKnown RBP25.34■■□□□ 1.65
NEK6-210ENST00000447379 FAM135AQ9P2D6 1515 aa25.32■■□□□ 1.64
NEK6-210ENST00000447379 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
NEK6-210ENST00000447379 ERBINQ96RT1 1412 aa25.3■■□□□ 1.64
NEK6-210ENST00000447379 RRBP1Q9P2E9 1410 aaKnown RBP25.29■■□□□ 1.64
NEK6-210ENST00000447379 NPATQ14207 1427 aa25.28■■□□□ 1.64
NEK6-210ENST00000447379 KDM5DQ9BY66 1539 aa25.27■■□□□ 1.64
NEK6-210ENST00000447379 PREX1Q8TCU6 1659 aa25.27■■□□□ 1.64
NEK6-210ENST00000447379 WASHC2CQ9Y4E1 1318 aa25.27■■□□□ 1.64
NEK6-210ENST00000447379 MROH1Q8NDA8 1641 aa25.26■■□□□ 1.63
NEK6-210ENST00000447379 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
NEK6-210ENST00000447379 ABCC3O15438 1527 aa25.22■■□□□ 1.63
NEK6-210ENST00000447379 UHRF1BP1Q6BDS2 1440 aa25.21■■□□□ 1.63
NEK6-210ENST00000447379 DEPDC5O75140 1603 aa25.2■■□□□ 1.62
NEK6-210ENST00000447379 HSPA2P54652 639 aa25.2■■□□□ 1.62
NEK6-210ENST00000447379 ZC3H13Q5T200 1668 aaKnown RBP25.2■■□□□ 1.62
NEK6-210ENST00000447379 PRDM15P57071 1507 aaPredicted RBP25.19■■□□□ 1.62
NEK6-210ENST00000447379 PZPP20742 1482 aa25.19■■□□□ 1.62
NEK6-210ENST00000447379 ITGAEP38570 1179 aa25.18■■□□□ 1.62
NEK6-210ENST00000447379 ANKRD50Q9ULJ7 1429 aa25.18■■□□□ 1.62
NEK6-210ENST00000447379 FBXO31Q5XUX0 539 aaPredicted RBP25.15■■□□□ 1.62
NEK6-210ENST00000447379 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.14■■□□□ 1.62
NEK6-210ENST00000447379 CEP152O94986 1710 aa25.14■■□□□ 1.61
NEK6-210ENST00000447379 KANK1Q14678 1352 aa25.12■■□□□ 1.61
NEK6-210ENST00000447379 VWDEQ8N2E2 1590 aa25.12■■□□□ 1.61
NEK6-210ENST00000447379 TNRQ92752 1358 aa25.1■■□□□ 1.61
NEK6-210ENST00000447379 CAMSAP1Q5T5Y3 1602 aa25.1■■□□□ 1.61
NEK6-210ENST00000447379 MYO3AQ8NEV4 1616 aa25.09■■□□□ 1.61
NEK6-210ENST00000447379 ARHGAP31Q2M1Z3 1444 aa25.09■■□□□ 1.61
NEK6-210ENST00000447379 LMTK2Q8IWU2 1503 aa25.08■■□□□ 1.61
NEK6-210ENST00000447379 ZNF142P52746 1687 aaPredicted RBP25.06■■□□□ 1.6
NEK6-210ENST00000447379 SPATA31D1Q6ZQQ2 1576 aa25.05■■□□□ 1.6
NEK6-210ENST00000447379 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
NEK6-210ENST00000447379 CFAP65Q6ZU64 1925 aaKnown RBP25.04■■□□□ 1.6
NEK6-210ENST00000447379 ERVK-7P63135 1459 aa25.04■■□□□ 1.6
NEK6-210ENST00000447379 A2ML1A8K2U0 1454 aa25.03■■□□□ 1.6
NEK6-210ENST00000447379 STRCQ7RTU9 1775 aa25.03■■□□□ 1.6
NEK6-210ENST00000447379 UNC13BO14795 1591 aa25.02■■□□□ 1.6
NEK6-210ENST00000447379 NLRP1Q9C000 1473 aa25■■□□□ 1.59
NEK6-210ENST00000447379 NAIPQ13075 1403 aa24.98■■□□□ 1.59
NEK6-210ENST00000447379 EFCAB6Q5THR3 1501 aa24.97■■□□□ 1.59
NEK6-210ENST00000447379 PLA2R1Q13018 1463 aa24.95■■□□□ 1.58
NEK6-210ENST00000447379 TET3O43151 1660 aa24.94■■□□□ 1.58
NEK6-210ENST00000447379 DMRT2Q9Y5R5 561 aa24.94■■□□□ 1.58
NEK6-210ENST00000447379 HFM1A2PYH4 1435 aa24.94■■□□□ 1.58
NEK6-210ENST00000447379 GCC2Q8IWJ2 1684 aa24.93■■□□□ 1.58
NEK6-210ENST00000447379 IQGAP3Q86VI3 1631 aa24.93■■□□□ 1.58
NEK6-210ENST00000447379 NUP155O75694 1391 aa24.93■■□□□ 1.58
NEK6-210ENST00000447379 RPRD2Q5VT52 1461 aaKnown RBP24.91■■□□□ 1.58
NEK6-210ENST00000447379 NOS1P29475 1434 aa24.91■■□□□ 1.58
NEK6-210ENST00000447379 PTPRTO14522 1441 aa24.9■■□□□ 1.58
NEK6-210ENST00000447379 THEMISQ8N1K5 641 aaPredicted RBP24.9■■□□□ 1.58
NEK6-210ENST00000447379 UGGT1Q9NYU2 1555 aa24.89■■□□□ 1.58
NEK6-210ENST00000447379 PKD2Q13563 968 aa24.89■■□□□ 1.58
NEK6-210ENST00000447379 NCKAP5LQ9HCH0 1330 aa24.88■■□□□ 1.57
NEK6-210ENST00000447379 SYNMO15061 1565 aa24.86■■□□□ 1.57
NEK6-210ENST00000447379 E9PCH4 1651 aa24.85■■□□□ 1.57
NEK6-210ENST00000447379 IDI1Q13907 227 aa24.84■■□□□ 1.57
NEK6-210ENST00000447379 UBR1Q8IWV7 1749 aa24.83■■□□□ 1.57
NEK6-210ENST00000447379 SLC52A1Q9NWF4 448 aa24.82■■□□□ 1.56
NEK6-210ENST00000447379 PIK3C2BO00750 1634 aa24.81■■□□□ 1.56
NEK6-210ENST00000447379 ANKLE2Q86XL3 938 aa24.8■■□□□ 1.56
NEK6-210ENST00000447379 KDM5AP29375 1690 aaKnown RBP24.78■■□□□ 1.56
NEK6-210ENST00000447379 POLR1AO95602 1720 aaPredicted RBP24.78■■□□□ 1.56
NEK6-210ENST00000447379 NEURL4Q96JN8 1562 aa24.76■■□□□ 1.55
NEK6-210ENST00000447379 ARHGAP23Q9P227 1491 aa24.76■■□□□ 1.55
NEK6-210ENST00000447379 TRIM52Q96A61 297 aa24.75■■□□□ 1.55
NEK6-210ENST00000447379 SLIT1O75093 1534 aa24.75■■□□□ 1.55
NEK6-210ENST00000447379 MED14O60244 1454 aa24.74■■□□□ 1.55
NEK6-210ENST00000447379 STAG3Q9UJ98 1225 aa24.73■■□□□ 1.55
NEK6-210ENST00000447379 ADGRB3O60242 1522 aa24.71■■□□□ 1.55
NEK6-210ENST00000447379 SETD5Q9C0A6 1442 aa24.71■■□□□ 1.55
NEK6-210ENST00000447379 TMEM2Q9UHN6 1383 aa24.71■■□□□ 1.55
NEK6-210ENST00000447379 NPHP4O75161 1426 aaPredicted RBP24.69■■□□□ 1.54
NEK6-210ENST00000447379 LTKP29376 864 aa24.69■■□□□ 1.54
NEK6-210ENST00000447379 TXNDC2Q86VQ3 553 aa24.68■■□□□ 1.54
NEK6-210ENST00000447379 SCAF11Q99590 1463 aaKnown RBP24.68■■□□□ 1.54
NEK6-210ENST00000447379 ACIN1Q9UKV3 1341 aaKnown RBP24.67■■□□□ 1.54
NEK6-210ENST00000447379 SPHKAPQ2M3C7 1700 aa24.67■■□□□ 1.54
NEK6-210ENST00000447379 TMEM131LA2VDJ0 1609 aa24.67■■□□□ 1.54
NEK6-210ENST00000447379 LTBP4Q8N2S1 1624 aa24.66■■□□□ 1.54
NEK6-210ENST00000447379 CERKQ8TCT0 537 aa24.66■■□□□ 1.54
NEK6-210ENST00000447379 SLC4A1APQ9BWU0 796 aaKnown RBP24.66■■□□□ 1.54
NEK6-210ENST00000447379 EID1Q9Y6B2 187 aa24.66■■□□□ 1.54
NEK6-210ENST00000447379 MYO5BQ9ULV0 1848 aa24.65■■□□□ 1.54
NEK6-210ENST00000447379 IQGAP1P46940 1657 aa24.65■■□□□ 1.54
NEK6-210ENST00000447379 ZNF335Q9H4Z2 1342 aaPredicted RBP24.62■■□□□ 1.53
NEK6-210ENST00000447379 TRPM2O94759 1503 aa24.61■■□□□ 1.53
NEK6-210ENST00000447379 RAB3GAP2Q9H2M9 1393 aa24.6■■□□□ 1.53
NEK6-210ENST00000447379 MPHOSPH9Q99550 1183 aa24.6■■□□□ 1.53
NEK6-210ENST00000447379 ZFYVE9O95405 1425 aa24.6■■□□□ 1.53
NEK6-210ENST00000447379 CHGAP10645 457 aaKnown RBP24.59■■□□□ 1.53
NEK6-210ENST00000447379 RIMS2Q9UQ26 1411 aa24.57■■□□□ 1.52
NEK6-210ENST00000447379 HRCP23327 699 aa24.56■■□□□ 1.52
NEK6-210ENST00000447379 CLTCL1P53675 1640 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms