RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.99■□□□□ 0.79
SSR4-205ENST00000447375 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
SSR4-205ENST00000447375 KIAA1107Q9UPP5 1409 aa19.99■□□□□ 0.79
SSR4-205ENST00000447375 GPATCH8Q9UKJ3 1502 aaKnown RBP19.98■□□□□ 0.79
SSR4-205ENST00000447375 INO80Q9ULG1 1556 aaPredicted RBP19.97■□□□□ 0.79
SSR4-205ENST00000447375 NPHP4O75161 1426 aaPredicted RBP19.97■□□□□ 0.79
SSR4-205ENST00000447375 CFDP1Q9UEE9 299 aaPredicted RBP19.97■□□□□ 0.79
SSR4-205ENST00000447375 CASKIN1Q8WXD9 1431 aa19.96■□□□□ 0.79
SSR4-205ENST00000447375 PLEKHH2Q8IVE3 1493 aa19.95■□□□□ 0.78
SSR4-205ENST00000447375 MED14O60244 1454 aa19.93■□□□□ 0.78
SSR4-205ENST00000447375 LRRC7Q96NW7 1537 aa19.92■□□□□ 0.78
SSR4-205ENST00000447375 POTEAQ6S8J7 498 aa19.91■□□□□ 0.78
SSR4-205ENST00000447375 PZPP20742 1482 aa19.9■□□□□ 0.78
SSR4-205ENST00000447375 ADGBQ8N7X0 1667 aa19.9■□□□□ 0.78
SSR4-205ENST00000447375 KIF3BO15066 747 aa19.89■□□□□ 0.77
SSR4-205ENST00000447375 CEP162Q5TB80 1403 aa19.89■□□□□ 0.77
SSR4-205ENST00000447375 DHX29Q7Z478 1369 aaKnown RBP19.89■□□□□ 0.77
SSR4-205ENST00000447375 MIA2Q96PC5 1412 aa19.89■□□□□ 0.77
SSR4-205ENST00000447375 FAM135AQ9P2D6 1515 aa19.89■□□□□ 0.77
SSR4-205ENST00000447375 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
SSR4-205ENST00000447375 WASHC2CQ9Y4E1 1318 aa19.88■□□□□ 0.77
SSR4-205ENST00000447375 DEPDC5O75140 1603 aa19.87■□□□□ 0.77
SSR4-205ENST00000447375 CCNB3Q8WWL7 1395 aa19.87■□□□□ 0.77
SSR4-205ENST00000447375 RNF17Q9BXT8 1623 aaKnown RBP19.87■□□□□ 0.77
SSR4-205ENST00000447375 NLRP1Q9C000 1473 aa19.86■□□□□ 0.77
SSR4-205ENST00000447375 STRCP1A6NGW2 1772 aa19.85■□□□□ 0.77
SSR4-205ENST00000447375 FYCO1Q9BQS8 1478 aa19.85■□□□□ 0.77
SSR4-205ENST00000447375 IQGAP1P46940 1657 aa19.84■□□□□ 0.77
SSR4-205ENST00000447375 ZNF644Q9H582 1327 aaPredicted RBP19.84■□□□□ 0.77
SSR4-205ENST00000447375 RTEL1-TNFRSF6BF6WH68 1400 aa19.83■□□□□ 0.76
SSR4-205ENST00000447375 KDM5DQ9BY66 1539 aa19.82■□□□□ 0.76
SSR4-205ENST00000447375 SYNMO15061 1565 aa19.82■□□□□ 0.76
SSR4-205ENST00000447375 MBD5Q9P267 1494 aa19.79■□□□□ 0.76
SSR4-205ENST00000447375 FAM135BQ49AJ0 1406 aa19.76■□□□□ 0.75
SSR4-205ENST00000447375 MTUS2Q5JR59 1369 aa19.73■□□□□ 0.75
SSR4-205ENST00000447375 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
SSR4-205ENST00000447375 ZC3H13Q5T200 1668 aaKnown RBP19.7■□□□□ 0.74
SSR4-205ENST00000447375 LTKP29376 864 aa19.69■□□□□ 0.74
SSR4-205ENST00000447375 SETD1AO15047 1707 aaKnown RBP19.68■□□□□ 0.74
SSR4-205ENST00000447375 SCAF11Q99590 1463 aaKnown RBP19.68■□□□□ 0.74
SSR4-205ENST00000447375 RSPH4AQ5TD94 716 aa19.68■□□□□ 0.74
SSR4-205ENST00000447375 TIAM1Q13009 1591 aa19.67■□□□□ 0.74
SSR4-205ENST00000447375 UPF1Q92900 1129 aaKnown RBP eCLIP19.67■□□□□ 0.74
SSR4-205ENST00000447375 VPS8Q8N3P4 1428 aa19.66■□□□□ 0.74
SSR4-205ENST00000447375 CCDC141Q6ZP82 1450 aa19.66■□□□□ 0.74
SSR4-205ENST00000447375 XIRP1Q702N8 1843 aaKnown RBP19.65■□□□□ 0.74
SSR4-205ENST00000447375 ERVK-7P63135 1459 aa19.64■□□□□ 0.73
SSR4-205ENST00000447375 TMEM94Q12767 1356 aa19.63■□□□□ 0.73
SSR4-205ENST00000447375 EID1Q9Y6B2 187 aa19.63■□□□□ 0.73
SSR4-205ENST00000447375 EHBP1L1Q8N3D4 1523 aa19.62■□□□□ 0.73
SSR4-205ENST00000447375 TSPY4P0CV99 314 aa19.62■□□□□ 0.73
SSR4-205ENST00000447375 TSPY10P0CW01 314 aa19.62■□□□□ 0.73
SSR4-205ENST00000447375 ABCC3O15438 1527 aa19.61■□□□□ 0.73
SSR4-205ENST00000447375 NCOA2Q15596 1464 aa19.61■□□□□ 0.73
SSR4-205ENST00000447375 ARHGAP23Q9P227 1491 aa19.6■□□□□ 0.73
SSR4-205ENST00000447375 UBR1Q8IWV7 1749 aa19.6■□□□□ 0.73
SSR4-205ENST00000447375 ROBO1Q9Y6N7 1651 aa19.6■□□□□ 0.73
SSR4-205ENST00000447375 PROSER2Q86WR7 435 aaPredicted RBP19.59■□□□□ 0.73
SSR4-205ENST00000447375 RBM33Q96EV2 1170 aaKnown RBP19.59■□□□□ 0.73
SSR4-205ENST00000447375 JCADQ9P266 1359 aa19.58■□□□□ 0.73
SSR4-205ENST00000447375 SLIT1O75093 1534 aa19.58■□□□□ 0.73
SSR4-205ENST00000447375 KCNA6P17658 529 aa19.58■□□□□ 0.72
SSR4-205ENST00000447375 TRIM52Q96A61 297 aa19.58■□□□□ 0.72
SSR4-205ENST00000447375 CAMSAP2Q08AD1 1489 aa19.56■□□□□ 0.72
SSR4-205ENST00000447375 ZNF772Q68DY9 489 aaPredicted RBP19.55■□□□□ 0.72
SSR4-205ENST00000447375 LRRC9Q6ZRR7 1453 aa19.54■□□□□ 0.72
SSR4-205ENST00000447375 SLAIN2Q9P270 581 aa19.54■□□□□ 0.72
SSR4-205ENST00000447375 MEX3CQ5U5Q3 659 aaKnown RBP19.53■□□□□ 0.72
SSR4-205ENST00000447375 MAP3K1Q13233 1512 aa19.52■□□□□ 0.72
SSR4-205ENST00000447375 STAG3Q9UJ98 1225 aa19.52■□□□□ 0.72
SSR4-205ENST00000447375 TMEM2Q9UHN6 1383 aa19.52■□□□□ 0.72
SSR4-205ENST00000447375 SLC26A8Q96RN1 970 aa19.51■□□□□ 0.71
SSR4-205ENST00000447375 MSH6P52701 1360 aa19.5■□□□□ 0.71
SSR4-205ENST00000447375 CFAP65Q6ZU64 1925 aaKnown RBP19.5■□□□□ 0.71
SSR4-205ENST00000447375 PHLPP1O60346 1717 aa19.5■□□□□ 0.71
SSR4-205ENST00000447375 SPATA31A6Q5VVP1 1343 aa19.49■□□□□ 0.71
SSR4-205ENST00000447375 ARHGEF5Q12774 1597 aa19.49■□□□□ 0.71
SSR4-205ENST00000447375 RXRBP28702 533 aa19.48■□□□□ 0.71
SSR4-205ENST00000447375 PRDM15P57071 1507 aaPredicted RBP19.47■□□□□ 0.71
SSR4-205ENST00000447375 KANK4Q5T7N3 995 aaPredicted RBP19.46■□□□□ 0.71
SSR4-205ENST00000447375 LRP6O75581 1613 aa19.46■□□□□ 0.71
SSR4-205ENST00000447375 CEP152O94986 1710 aa19.45■□□□□ 0.7
SSR4-205ENST00000447375 MROH1Q8NDA8 1641 aa19.45■□□□□ 0.7
SSR4-205ENST00000447375 EIF2AK4Q9P2K8 1649 aaKnown RBP19.44■□□□□ 0.7
SSR4-205ENST00000447375 ARHGAP31Q2M1Z3 1444 aa19.44■□□□□ 0.7
SSR4-205ENST00000447375 APLP2Q06481 763 aa19.44■□□□□ 0.7
SSR4-205ENST00000447375 PIK3C2BO00750 1634 aa19.43■□□□□ 0.7
SSR4-205ENST00000447375 TET3O43151 1660 aa19.43■□□□□ 0.7
SSR4-205ENST00000447375 FGD6Q6ZV73 1430 aa19.42■□□□□ 0.7
SSR4-205ENST00000447375 NKTRP30414 1462 aaKnown RBP19.42■□□□□ 0.7
SSR4-205ENST00000447375 BCANQ96GW7 911 aa19.42■□□□□ 0.7
SSR4-205ENST00000447375 COL16A1Q07092 1604 aaPredicted RBP19.41■□□□□ 0.7
SSR4-205ENST00000447375 IDI1Q13907 227 aa19.41■□□□□ 0.7
SSR4-205ENST00000447375 MAST1Q9Y2H9 1570 aa19.4■□□□□ 0.7
SSR4-205ENST00000447375 EFCAB6Q5THR3 1501 aa19.39■□□□□ 0.69
SSR4-205ENST00000447375 SRCAPQ6ZRS2 3230 aa19.39■□□□□ 0.69
SSR4-205ENST00000447375 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
SSR4-205ENST00000447375 CDK12Q9NYV4 1490 aaPredicted RBP19.38■□□□□ 0.69
SSR4-205ENST00000447375 NWD1Q149M9 1564 aa19.37■□□□□ 0.69
SSR4-205ENST00000447375 NUTM2BA6NNL0 878 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms