RNA–Protein interactions for RNA: ENST00000447261.6

BCRP3-201, Transcript of breakpoint cluster region pseudogene 3, humanhuman

TSL 2

Gene BCRP3, Length 1,457 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCRP3-201ENST00000447261 NCOA1Q15788 1441 aa24.34■■□□□ 1.49
BCRP3-201ENST00000447261 MAST1Q9Y2H9 1570 aa24.33■■□□□ 1.49
BCRP3-201ENST00000447261 WASHC2CQ9Y4E1 1318 aa24.33■■□□□ 1.49
BCRP3-201ENST00000447261 PTPRTO14522 1441 aa24.32■■□□□ 1.48
BCRP3-201ENST00000447261 KDM5DQ9BY66 1539 aa24.32■■□□□ 1.48
BCRP3-201ENST00000447261 HRCP23327 699 aa24.31■■□□□ 1.48
BCRP3-201ENST00000447261 CEP170BQ9Y4F5 1589 aaPredicted RBP24.3■■□□□ 1.48
BCRP3-201ENST00000447261 ZNF142P52746 1687 aaPredicted RBP24.3■■□□□ 1.48
BCRP3-201ENST00000447261 FBXO31Q5XUX0 539 aaPredicted RBP24.28■■□□□ 1.48
BCRP3-201ENST00000447261 NCKAP5LQ9HCH0 1330 aa24.28■■□□□ 1.48
BCRP3-201ENST00000447261 PTPN23Q9H3S7 1636 aa24.27■■□□□ 1.48
BCRP3-201ENST00000447261 FAM135AQ9P2D6 1515 aa24.27■■□□□ 1.48
BCRP3-201ENST00000447261 PZPP20742 1482 aa24.25■■□□□ 1.47
BCRP3-201ENST00000447261 TNRQ92752 1358 aa24.25■■□□□ 1.47
BCRP3-201ENST00000447261 RNF17Q9BXT8 1623 aaKnown RBP24.23■■□□□ 1.47
BCRP3-201ENST00000447261 A2ML1A8K2U0 1454 aa24.22■■□□□ 1.47
BCRP3-201ENST00000447261 FGD6Q6ZV73 1430 aa24.22■■□□□ 1.47
BCRP3-201ENST00000447261 ABCC5O15440 1437 aa24.22■■□□□ 1.47
BCRP3-201ENST00000447261 EIF2AK4Q9P2K8 1649 aaKnown RBP24.21■■□□□ 1.47
BCRP3-201ENST00000447261 PLA2R1Q13018 1463 aa24.21■■□□□ 1.47
BCRP3-201ENST00000447261 CROCC2H7BZ55 1655 aa24.21■■□□□ 1.47
BCRP3-201ENST00000447261 PKD2Q13563 968 aa24.2■■□□□ 1.47
BCRP3-201ENST00000447261 DUOX2Q9NRD8 1548 aa24.2■■□□□ 1.47
BCRP3-201ENST00000447261 RRP7BPQ9NSQ0 103 aa24.19■■□□□ 1.46
BCRP3-201ENST00000447261 SHANK2Q9UPX8 1470 aa24.19■■□□□ 1.46
BCRP3-201ENST00000447261 DNMT1P26358 1616 aaKnown RBP24.19■■□□□ 1.46
BCRP3-201ENST00000447261 KIF15Q9NS87 1388 aa24.19■■□□□ 1.46
BCRP3-201ENST00000447261 DAPK1P53355 1430 aa24.18■■□□□ 1.46
BCRP3-201ENST00000447261 ABCC3O15438 1527 aa24.18■■□□□ 1.46
BCRP3-201ENST00000447261 TCOF1Q13428 1488 aaKnown RBP24.17■■□□□ 1.46
BCRP3-201ENST00000447261 ZC3H13Q5T200 1668 aaKnown RBP24.16■■□□□ 1.46
BCRP3-201ENST00000447261 CHIC2Q9UKJ5 165 aa24.15■■□□□ 1.46
BCRP3-201ENST00000447261 LTBP4Q8N2S1 1624 aa24.14■■□□□ 1.46
BCRP3-201ENST00000447261 MROH1Q8NDA8 1641 aa24.14■■□□□ 1.46
BCRP3-201ENST00000447261 CEP152O94986 1710 aa24.13■■□□□ 1.45
BCRP3-201ENST00000447261 ERBINQ96RT1 1412 aa24.12■■□□□ 1.45
BCRP3-201ENST00000447261 CFAP65Q6ZU64 1925 aaKnown RBP24.11■■□□□ 1.45
BCRP3-201ENST00000447261 ZNF335Q9H4Z2 1342 aaPredicted RBP24.11■■□□□ 1.45
BCRP3-201ENST00000447261 NLRP1Q9C000 1473 aa24.11■■□□□ 1.45
BCRP3-201ENST00000447261 FAM50AQ14320 339 aaKnown RBP24.11■■□□□ 1.45
BCRP3-201ENST00000447261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.11■■□□□ 1.45
BCRP3-201ENST00000447261 RRBP1Q9P2E9 1410 aaKnown RBP24.11■■□□□ 1.45
BCRP3-201ENST00000447261 ANKRD30AQ9BXX3 1397 aa24.09■■□□□ 1.45
BCRP3-201ENST00000447261 THEMISQ8N1K5 641 aaPredicted RBP24.09■■□□□ 1.45
BCRP3-201ENST00000447261 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.09■■□□□ 1.45
BCRP3-201ENST00000447261 ZEB1P37275 1124 aaPredicted RBP24.08■■□□□ 1.45
BCRP3-201ENST00000447261 UGGT1Q9NYU2 1555 aa24.08■■□□□ 1.45
BCRP3-201ENST00000447261 ERVK-7P63135 1459 aa24.07■■□□□ 1.44
BCRP3-201ENST00000447261 POLR1AO95602 1720 aaPredicted RBP24.07■■□□□ 1.44
BCRP3-201ENST00000447261 SPATA31D1Q6ZQQ2 1576 aa24.06■■□□□ 1.44
BCRP3-201ENST00000447261 PRDM15P57071 1507 aaPredicted RBP24.06■■□□□ 1.44
BCRP3-201ENST00000447261 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
BCRP3-201ENST00000447261 KANK1Q14678 1352 aa24.03■■□□□ 1.44
BCRP3-201ENST00000447261 NEURL4Q96JN8 1562 aa24.02■■□□□ 1.44
BCRP3-201ENST00000447261 IQSEC2Q5JU85 1478 aa24.02■■□□□ 1.44
BCRP3-201ENST00000447261 DEPDC5O75140 1603 aa24.01■■□□□ 1.43
BCRP3-201ENST00000447261 ARHGAP31Q2M1Z3 1444 aa23.98■■□□□ 1.43
BCRP3-201ENST00000447261 ADGRL2O95490 1459 aa23.98■■□□□ 1.43
BCRP3-201ENST00000447261 NPHP4O75161 1426 aaPredicted RBP23.96■■□□□ 1.43
BCRP3-201ENST00000447261 UBAP1LF5GYI3 381 aa23.94■■□□□ 1.42
BCRP3-201ENST00000447261 UBR1Q8IWV7 1749 aa23.93■■□□□ 1.42
BCRP3-201ENST00000447261 MED14O60244 1454 aa23.93■■□□□ 1.42
BCRP3-201ENST00000447261 LMTK2Q8IWU2 1503 aa23.91■■□□□ 1.42
BCRP3-201ENST00000447261 ANKRD50Q9ULJ7 1429 aa23.91■■□□□ 1.42
BCRP3-201ENST00000447261 IQGAP1P46940 1657 aa23.9■■□□□ 1.42
BCRP3-201ENST00000447261 VWDEQ8N2E2 1590 aa23.9■■□□□ 1.42
BCRP3-201ENST00000447261 STAG3Q9UJ98 1225 aa23.89■■□□□ 1.42
BCRP3-201ENST00000447261 CPS1P31327 1500 aa23.88■■□□□ 1.41
BCRP3-201ENST00000447261 PIK3C2BO00750 1634 aa23.86■■□□□ 1.41
BCRP3-201ENST00000447261 SCAF11Q99590 1463 aaKnown RBP23.85■■□□□ 1.41
BCRP3-201ENST00000447261 EFCAB6Q5THR3 1501 aa23.85■■□□□ 1.41
BCRP3-201ENST00000447261 ITGAEP38570 1179 aa23.85■■□□□ 1.41
BCRP3-201ENST00000447261 TXNDC2Q86VQ3 553 aa23.85■■□□□ 1.41
BCRP3-201ENST00000447261 CCER1Q8TC90 406 aaPredicted RBP23.85■■□□□ 1.41
BCRP3-201ENST00000447261 LTKP29376 864 aa23.83■■□□□ 1.41
BCRP3-201ENST00000447261 EID1Q9Y6B2 187 aa23.83■■□□□ 1.41
BCRP3-201ENST00000447261 IDI1Q13907 227 aa23.82■■□□□ 1.4
BCRP3-201ENST00000447261 SLIT1O75093 1534 aa23.82■■□□□ 1.4
BCRP3-201ENST00000447261 ARHGAP23Q9P227 1491 aa23.81■■□□□ 1.4
BCRP3-201ENST00000447261 SYNMO15061 1565 aa23.81■■□□□ 1.4
BCRP3-201ENST00000447261 SCAF1Q9H7N4 1312 aaKnown RBP23.81■■□□□ 1.4
BCRP3-201ENST00000447261 NOS1P29475 1434 aa23.79■■□□□ 1.4
BCRP3-201ENST00000447261 ROCK1Q13464 1354 aa23.79■■□□□ 1.4
BCRP3-201ENST00000447261 TMEM2Q9UHN6 1383 aa23.78■■□□□ 1.4
BCRP3-201ENST00000447261 PIP4K2BP78356 416 aa23.78■■□□□ 1.4
BCRP3-201ENST00000447261 TOM1O60784 492 aa23.77■■□□□ 1.4
BCRP3-201ENST00000447261 STRCP1A6NGW2 1772 aa23.76■■□□□ 1.39
BCRP3-201ENST00000447261 TET3O43151 1660 aa23.76■■□□□ 1.39
BCRP3-201ENST00000447261 SLC52A1Q9NWF4 448 aa23.75■■□□□ 1.39
BCRP3-201ENST00000447261 UNC13BO14795 1591 aa23.75■■□□□ 1.39
BCRP3-201ENST00000447261 DISP3Q9P2K9 1392 aa23.75■■□□□ 1.39
BCRP3-201ENST00000447261 KDM5AP29375 1690 aaKnown RBP23.75■■□□□ 1.39
BCRP3-201ENST00000447261 RPRD2Q5VT52 1461 aaKnown RBP23.75■■□□□ 1.39
BCRP3-201ENST00000447261 ADGRB3O60242 1522 aa23.73■■□□□ 1.39
BCRP3-201ENST00000447261 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
BCRP3-201ENST00000447261 LRRC7Q96NW7 1537 aa23.7■■□□□ 1.39
BCRP3-201ENST00000447261 NUP155O75694 1391 aa23.68■■□□□ 1.38
BCRP3-201ENST00000447261 BCANQ96GW7 911 aa23.68■■□□□ 1.38
BCRP3-201ENST00000447261 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
BCRP3-201ENST00000447261 E9PCH4 1651 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms