RNA–Protein interactions for RNA: ENST00000446922.6

HMGB2-203, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-203ENST00000446922 KDM5DQ9BY66 1539 aa24.3■■□□□ 1.48
HMGB2-203ENST00000446922 NCOA1Q15788 1441 aa24.3■■□□□ 1.48
HMGB2-203ENST00000446922 ZNF142P52746 1687 aaPredicted RBP24.27■■□□□ 1.48
HMGB2-203ENST00000446922 PZPP20742 1482 aa24.26■■□□□ 1.47
HMGB2-203ENST00000446922 PLA2R1Q13018 1463 aa24.26■■□□□ 1.47
HMGB2-203ENST00000446922 SHANK2Q9UPX8 1470 aa24.26■■□□□ 1.47
HMGB2-203ENST00000446922 EIF2AK4Q9P2K8 1649 aaKnown RBP24.25■■□□□ 1.47
HMGB2-203ENST00000446922 PKD2Q13563 968 aa24.25■■□□□ 1.47
HMGB2-203ENST00000446922 CAMSAP1Q5T5Y3 1602 aa24.24■■□□□ 1.47
HMGB2-203ENST00000446922 MYO3AQ8NEV4 1616 aa24.24■■□□□ 1.47
HMGB2-203ENST00000446922 PTPN23Q9H3S7 1636 aa24.24■■□□□ 1.47
HMGB2-203ENST00000446922 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
HMGB2-203ENST00000446922 TCOF1Q13428 1488 aaKnown RBP24.24■■□□□ 1.47
HMGB2-203ENST00000446922 DUOX2Q9NRD8 1548 aa24.24■■□□□ 1.47
HMGB2-203ENST00000446922 RNF17Q9BXT8 1623 aaKnown RBP24.24■■□□□ 1.47
HMGB2-203ENST00000446922 ABCC5O15440 1437 aa24.23■■□□□ 1.47
HMGB2-203ENST00000446922 CEP170BQ9Y4F5 1589 aaPredicted RBP24.23■■□□□ 1.47
HMGB2-203ENST00000446922 A2ML1A8K2U0 1454 aa24.22■■□□□ 1.47
HMGB2-203ENST00000446922 TNRQ92752 1358 aa24.21■■□□□ 1.47
HMGB2-203ENST00000446922 FBXO31Q5XUX0 539 aaPredicted RBP24.19■■□□□ 1.46
HMGB2-203ENST00000446922 DAPK1P53355 1430 aa24.18■■□□□ 1.46
HMGB2-203ENST00000446922 ZC3H13Q5T200 1668 aaKnown RBP24.18■■□□□ 1.46
HMGB2-203ENST00000446922 KIF15Q9NS87 1388 aa24.17■■□□□ 1.46
HMGB2-203ENST00000446922 ERBINQ96RT1 1412 aa24.17■■□□□ 1.46
HMGB2-203ENST00000446922 DNMT1P26358 1616 aaKnown RBP24.17■■□□□ 1.46
HMGB2-203ENST00000446922 CROCC2H7BZ55 1655 aa24.16■■□□□ 1.46
HMGB2-203ENST00000446922 NCKAP5LQ9HCH0 1330 aa24.15■■□□□ 1.46
HMGB2-203ENST00000446922 NLRP1Q9C000 1473 aa24.15■■□□□ 1.46
HMGB2-203ENST00000446922 ABCC3O15438 1527 aa24.14■■□□□ 1.45
HMGB2-203ENST00000446922 THEMISQ8N1K5 641 aaPredicted RBP24.13■■□□□ 1.45
HMGB2-203ENST00000446922 RRP7BPQ9NSQ0 103 aa24.13■■□□□ 1.45
HMGB2-203ENST00000446922 ANKRD30AQ9BXX3 1397 aa24.13■■□□□ 1.45
HMGB2-203ENST00000446922 MROH1Q8NDA8 1641 aa24.11■■□□□ 1.45
HMGB2-203ENST00000446922 IQSEC2Q5JU85 1478 aa24.1■■□□□ 1.45
HMGB2-203ENST00000446922 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
HMGB2-203ENST00000446922 SPATA31D1Q6ZQQ2 1576 aa24.08■■□□□ 1.45
HMGB2-203ENST00000446922 ARHGAP31Q2M1Z3 1444 aa24.08■■□□□ 1.44
HMGB2-203ENST00000446922 PRDM15P57071 1507 aaPredicted RBP24.07■■□□□ 1.44
HMGB2-203ENST00000446922 ANKLE2Q86XL3 938 aa24.06■■□□□ 1.44
HMGB2-203ENST00000446922 KANK1Q14678 1352 aa24.05■■□□□ 1.44
HMGB2-203ENST00000446922 UGGT1Q9NYU2 1555 aa24.05■■□□□ 1.44
HMGB2-203ENST00000446922 ADGRL2O95490 1459 aa24.05■■□□□ 1.44
HMGB2-203ENST00000446922 CHIC2Q9UKJ5 165 aa24.04■■□□□ 1.44
HMGB2-203ENST00000446922 ERVK-7P63135 1459 aa24.04■■□□□ 1.44
HMGB2-203ENST00000446922 DEPDC5O75140 1603 aa24.03■■□□□ 1.44
HMGB2-203ENST00000446922 FAM50AQ14320 339 aaKnown RBP24.02■■□□□ 1.44
HMGB2-203ENST00000446922 CEP152O94986 1710 aa24■■□□□ 1.43
HMGB2-203ENST00000446922 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24■■□□□ 1.439e-10■■■□□ 17.8
HMGB2-203ENST00000446922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.98■■□□□ 1.431e-11■■■■■ 44.5
HMGB2-203ENST00000446922 ZNF335Q9H4Z2 1342 aaPredicted RBP23.98■■□□□ 1.43
HMGB2-203ENST00000446922 MED14O60244 1454 aa23.98■■□□□ 1.43
HMGB2-203ENST00000446922 LMTK2Q8IWU2 1503 aa23.98■■□□□ 1.43
HMGB2-203ENST00000446922 POLR1AO95602 1720 aaPredicted RBP23.98■■□□□ 1.43
HMGB2-203ENST00000446922 VWDEQ8N2E2 1590 aa23.95■■□□□ 1.43
HMGB2-203ENST00000446922 NEURL4Q96JN8 1562 aa23.95■■□□□ 1.42
HMGB2-203ENST00000446922 ANKRD50Q9ULJ7 1429 aa23.93■■□□□ 1.42
HMGB2-203ENST00000446922 NPHP4O75161 1426 aaPredicted RBP23.91■■□□□ 1.42
HMGB2-203ENST00000446922 ROCK1Q13464 1354 aa23.91■■□□□ 1.42
HMGB2-203ENST00000446922 CPS1P31327 1500 aa23.89■■□□□ 1.41
HMGB2-203ENST00000446922 CFAP65Q6ZU64 1925 aaKnown RBP23.88■■□□□ 1.41
HMGB2-203ENST00000446922 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
HMGB2-203ENST00000446922 SLIT1O75093 1534 aa23.86■■□□□ 1.41
HMGB2-203ENST00000446922 RPRD2Q5VT52 1461 aaKnown RBP23.85■■□□□ 1.41
HMGB2-203ENST00000446922 ARHGAP23Q9P227 1491 aa23.85■■□□□ 1.41
HMGB2-203ENST00000446922 KDM5AP29375 1690 aaKnown RBP23.84■■□□□ 1.41
HMGB2-203ENST00000446922 SLC52A1Q9NWF4 448 aa23.84■■□□□ 1.41
HMGB2-203ENST00000446922 EFCAB6Q5THR3 1501 aa23.84■■□□□ 1.41
HMGB2-203ENST00000446922 NOS1P29475 1434 aa23.84■■□□□ 1.41
HMGB2-203ENST00000446922 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
HMGB2-203ENST00000446922 EID1Q9Y6B2 187 aa23.83■■□□□ 1.41
HMGB2-203ENST00000446922 SCAF11Q99590 1463 aaKnown RBP23.82■■□□□ 1.4
HMGB2-203ENST00000446922 IDI1Q13907 227 aa23.82■■□□□ 1.4
HMGB2-203ENST00000446922 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
HMGB2-203ENST00000446922 UBAP1LF5GYI3 381 aa23.81■■□□□ 1.4
HMGB2-203ENST00000446922 STAG3Q9UJ98 1225 aa23.81■■□□□ 1.4
HMGB2-203ENST00000446922 TMEM2Q9UHN6 1383 aa23.79■■□□□ 1.4
HMGB2-203ENST00000446922 PIK3C2BO00750 1634 aa23.78■■□□□ 1.4
HMGB2-203ENST00000446922 LTKP29376 864 aa23.78■■□□□ 1.4
HMGB2-203ENST00000446922 TOM1O60784 492 aa23.76■■□□□ 1.39
HMGB2-203ENST00000446922 UNC13BO14795 1591 aa23.76■■□□□ 1.39
HMGB2-203ENST00000446922 TET3O43151 1660 aa23.76■■□□□ 1.39
HMGB2-203ENST00000446922 SYNMO15061 1565 aa23.75■■□□□ 1.39
HMGB2-203ENST00000446922 SENP3Q9H4L4 574 aaPredicted RBP23.74■■□□□ 1.39
HMGB2-203ENST00000446922 PPARGC1BQ86YN6 1023 aaKnown RBP23.72■■□□□ 1.39
HMGB2-203ENST00000446922 GCC2Q8IWJ2 1684 aa23.71■■□□□ 1.39
HMGB2-203ENST00000446922 RRBP1Q9P2E9 1410 aaKnown RBP23.71■■□□□ 1.39
HMGB2-203ENST00000446922 HDGFP51858 240 aaKnown RBP23.71■■□□□ 1.39
HMGB2-203ENST00000446922 ADGRB3O60242 1522 aa23.69■■□□□ 1.38
HMGB2-203ENST00000446922 ITGAEP38570 1179 aa23.68■■□□□ 1.38
HMGB2-203ENST00000446922 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
HMGB2-203ENST00000446922 NUP155O75694 1391 aa23.66■■□□□ 1.38
HMGB2-203ENST00000446922 LRRC7Q96NW7 1537 aa23.66■■□□□ 1.38
HMGB2-203ENST00000446922 STRCP1A6NGW2 1772 aa23.63■■□□□ 1.37
HMGB2-203ENST00000446922 E9PCH4 1651 aa23.61■■□□□ 1.37
HMGB2-203ENST00000446922 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.61■■□□□ 1.37
HMGB2-203ENST00000446922 KCNA6P17658 529 aa23.6■■□□□ 1.37
HMGB2-203ENST00000446922 ZFYVE9O95405 1425 aa23.59■■□□□ 1.37
HMGB2-203ENST00000446922 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
HMGB2-203ENST00000446922 PLEKHG1Q9ULL1 1385 aa23.57■■□□□ 1.36
HMGB2-203ENST00000446922 PIP4K2BP78356 416 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms