RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RALGAPBQ86X10 1494 aa18.23■□□□□ 0.51
VPS52-212ENST00000445902 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
VPS52-212ENST00000445902 ARXQ96QS3 562 aa18.23■□□□□ 0.51
VPS52-212ENST00000445902 RSPH6AQ9H0K4 717 aa18.23■□□□□ 0.51
VPS52-212ENST00000445902 POGKQ9P215 609 aa18.21■□□□□ 0.51
VPS52-212ENST00000445902 E9PCH4 1651 aa18.21■□□□□ 0.51
VPS52-212ENST00000445902 PARD3Q8TEW0 1356 aa18.21■□□□□ 0.51
VPS52-212ENST00000445902 CENPQQ7L2Z9 268 aaPredicted RBP18.21■□□□□ 0.5
VPS52-212ENST00000445902 WDR62O43379 1518 aa18.2■□□□□ 0.5
VPS52-212ENST00000445902 URB2Q14146 1524 aaKnown RBP18.18■□□□□ 0.5
VPS52-212ENST00000445902 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
VPS52-212ENST00000445902 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
VPS52-212ENST00000445902 KIAA0586Q9BVV6 1533 aa18.16■□□□□ 0.5
VPS52-212ENST00000445902 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
VPS52-212ENST00000445902 RRAGDQ9NQL2 400 aaPredicted RBP18.16■□□□□ 0.5
VPS52-212ENST00000445902 PER1O15534 1290 aaPredicted RBP18.15■□□□□ 0.5
VPS52-212ENST00000445902 NUP155O75694 1391 aa18.14■□□□□ 0.49
VPS52-212ENST00000445902 IQGAP2Q13576 1575 aa18.13■□□□□ 0.49
VPS52-212ENST00000445902 CAMSAP2Q08AD1 1489 aa18.13■□□□□ 0.49
VPS52-212ENST00000445902 ADAMTS8Q9UP79 889 aa18.13■□□□□ 0.49
VPS52-212ENST00000445902 BLMP54132 1417 aaPredicted RBP18.13■□□□□ 0.49
VPS52-212ENST00000445902 NBPF1Q3BBV0 1214 aa18.11■□□□□ 0.49
VPS52-212ENST00000445902 PANK3Q9H999 370 aa18.11■□□□□ 0.49
VPS52-212ENST00000445902 ZMYM4Q5VZL5 1548 aa18.11■□□□□ 0.49
VPS52-212ENST00000445902 ADGBQ8N7X0 1667 aa18.11■□□□□ 0.49
VPS52-212ENST00000445902 RGL3Q3MIN7 710 aa18.1■□□□□ 0.49
VPS52-212ENST00000445902 ANKRD50Q9ULJ7 1429 aa18.09■□□□□ 0.49
VPS52-212ENST00000445902 SEC24BO95487 1268 aa18.09■□□□□ 0.49
VPS52-212ENST00000445902 PLEKHH1Q9ULM0 1364 aa18.09■□□□□ 0.49
VPS52-212ENST00000445902 DUSP27Q5VZP5 1158 aa18.09■□□□□ 0.49
VPS52-212ENST00000445902 PRG4Q92954 1404 aaPredicted RBP18.08■□□□□ 0.49
VPS52-212ENST00000445902 DISP3Q9P2K9 1392 aa18.07■□□□□ 0.48
VPS52-212ENST00000445902 ANKRD30AQ9BXX3 1397 aa18.06■□□□□ 0.48
VPS52-212ENST00000445902 ARHGEF12Q9NZN5 1544 aa18.06■□□□□ 0.48
VPS52-212ENST00000445902 USP19O94966 1318 aa18.05■□□□□ 0.48
VPS52-212ENST00000445902 NUP153P49790 1475 aaKnown RBP18.05■□□□□ 0.48
VPS52-212ENST00000445902 ZNF608Q9ULD9 1512 aaPredicted RBP18.05■□□□□ 0.48
VPS52-212ENST00000445902 WDR43Q15061 677 aaKnown RBP eCLIP18.03■□□□□ 0.48
VPS52-212ENST00000445902 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.03■□□□□ 0.48
VPS52-212ENST00000445902 PKNOX2Q96KN3 472 aa18.03■□□□□ 0.48
VPS52-212ENST00000445902 NAP1L5Q96NT1 182 aaPredicted RBP18.03■□□□□ 0.48
VPS52-212ENST00000445902 BCAR3O75815 825 aa18.03■□□□□ 0.48
VPS52-212ENST00000445902 IGHDP01880 384 aa18.03■□□□□ 0.48
VPS52-212ENST00000445902 GOLGA2Q08379 1002 aa18.03■□□□□ 0.48
VPS52-212ENST00000445902 CCDC146Q8IYE0 955 aa18.03■□□□□ 0.48
VPS52-212ENST00000445902 SPRYD3Q8NCJ5 442 aa18.03■□□□□ 0.48
VPS52-212ENST00000445902 GZF1Q9H116 711 aaPredicted RBP18.02■□□□□ 0.48
VPS52-212ENST00000445902 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
VPS52-212ENST00000445902 CROCC2H7BZ55 1655 aa18■□□□□ 0.47
VPS52-212ENST00000445902 SPINK5Q9NQ38 1064 aaPredicted RBP18■□□□□ 0.47
VPS52-212ENST00000445902 VIRMAQ69YN4 1812 aaKnown RBP17.99■□□□□ 0.47
VPS52-212ENST00000445902 PDS5BQ9NTI5 1447 aa17.99■□□□□ 0.47
VPS52-212ENST00000445902 PANK2Q9BZ23 570 aa17.99■□□□□ 0.47
VPS52-212ENST00000445902 GPATCH8Q9UKJ3 1502 aaKnown RBP17.99■□□□□ 0.47
VPS52-212ENST00000445902 L1TD1Q5T7N2 865 aaKnown RBP17.99■□□□□ 0.47
VPS52-212ENST00000445902 ADGRL2O95490 1459 aa17.99■□□□□ 0.47
VPS52-212ENST00000445902 BECN1Q14457 450 aa17.98■□□□□ 0.47
VPS52-212ENST00000445902 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
VPS52-212ENST00000445902 VSIG10Q8N0Z9 540 aa17.98■□□□□ 0.47
VPS52-212ENST00000445902 PBRM1Q86U86 1689 aa17.98■□□□□ 0.47
VPS52-212ENST00000445902 TESK2Q96S53 571 aa17.97■□□□□ 0.47
VPS52-212ENST00000445902 CEP170Q5SW79 1584 aa17.97■□□□□ 0.47
VPS52-212ENST00000445902 COL17A1Q9UMD9 1497 aaPredicted RBP17.97■□□□□ 0.47
VPS52-212ENST00000445902 ITSN2Q9NZM3 1697 aa17.97■□□□□ 0.47
VPS52-212ENST00000445902 PRAG1Q86YV5 1406 aa17.97■□□□□ 0.47
VPS52-212ENST00000445902 RAPGEF6Q8TEU7 1601 aa17.96■□□□□ 0.47
VPS52-212ENST00000445902 KDM5DQ9BY66 1539 aa17.96■□□□□ 0.47
VPS52-212ENST00000445902 XRCC6P12956 609 aaKnown RBP eCLIP17.96■□□□□ 0.47
VPS52-212ENST00000445902 PPP2R1AP30153 589 aa17.95■□□□□ 0.46
VPS52-212ENST00000445902 TROQ12816 1431 aaPredicted RBP17.95■□□□□ 0.46
VPS52-212ENST00000445902 SLFN5Q08AF3 891 aa17.95■□□□□ 0.46
VPS52-212ENST00000445902 PNNQ9H307 717 aaKnown RBP17.94■□□□□ 0.46
VPS52-212ENST00000445902 ZNF521Q96K83 1311 aa17.94■□□□□ 0.46
VPS52-212ENST00000445902 ERBINQ96RT1 1412 aa17.93■□□□□ 0.46
VPS52-212ENST00000445902 GOLGA6L3A6NEY3 463 aa17.93■□□□□ 0.46
VPS52-212ENST00000445902 COG6Q9Y2V7 657 aa17.93■□□□□ 0.46
VPS52-212ENST00000445902 INSRP06213 1382 aa17.93■□□□□ 0.46
VPS52-212ENST00000445902 TMF1P82094 1093 aa17.92■□□□□ 0.46
VPS52-212ENST00000445902 GLIPR1L2Q4G1C9 344 aa17.92■□□□□ 0.46
VPS52-212ENST00000445902 C9orf84Q5VXU9 1444 aa17.92■□□□□ 0.46
VPS52-212ENST00000445902 PANK1Q8TE04 598 aa17.92■□□□□ 0.46
VPS52-212ENST00000445902 ANTXR1Q9H6X2 564 aa17.92■□□□□ 0.46
VPS52-212ENST00000445902 KIAA0556O60303 1618 aa17.92■□□□□ 0.46
VPS52-212ENST00000445902 TARBP1Q13395 1621 aaKnown RBP17.92■□□□□ 0.46
VPS52-212ENST00000445902 APAF1O14727 1248 aa17.91■□□□□ 0.46
VPS52-212ENST00000445902 CANXP27824 592 aaKnown RBP17.91■□□□□ 0.46
VPS52-212ENST00000445902 DISP1Q96F81 1524 aa17.91■□□□□ 0.46
VPS52-212ENST00000445902 EIF3AQ14152 1382 aaKnown RBP17.91■□□□□ 0.46
VPS52-212ENST00000445902 KNSTRNQ9Y448 316 aa17.91■□□□□ 0.46
VPS52-212ENST00000445902 DMRT2Q9Y5R5 561 aa17.91■□□□□ 0.46
VPS52-212ENST00000445902 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
VPS52-212ENST00000445902 CCDC144AA2RUR9 1427 aa17.9■□□□□ 0.46
VPS52-212ENST00000445902 TSPY4P0CV99 314 aa17.9■□□□□ 0.46
VPS52-212ENST00000445902 TSPY10P0CW01 314 aa17.9■□□□□ 0.46
VPS52-212ENST00000445902 TBC1D2Q9BYX2 928 aa17.9■□□□□ 0.46
VPS52-212ENST00000445902 ZMYND15Q9H091 742 aa17.9■□□□□ 0.46
VPS52-212ENST00000445902 HNRNPMP52272 730 aaKnown RBP eCLIP17.89■□□□□ 0.45
VPS52-212ENST00000445902 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.89■□□□□ 0.453e-6■■□□□ 11.4
VPS52-212ENST00000445902 HSP90AA2PQ14568 343 aaPredicted RBP17.89■□□□□ 0.45
VPS52-212ENST00000445902 NLRP1Q9C000 1473 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms