RNA–Protein interactions for RNA: ENST00000445815.1

AFF3-213, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-213ENST00000445815 TSPY10P0CW01 314 aa25.65■■□□□ 1.7
AFF3-213ENST00000445815 FBXO31Q5XUX0 539 aaPredicted RBP25.65■■□□□ 1.7
AFF3-213ENST00000445815 ARHGEF5Q12774 1597 aa25.65■■□□□ 1.7
AFF3-213ENST00000445815 DNMT1P26358 1616 aaKnown RBP25.64■■□□□ 1.7
AFF3-213ENST00000445815 WASHC2CQ9Y4E1 1318 aa25.63■■□□□ 1.69
AFF3-213ENST00000445815 DISP3Q9P2K9 1392 aa25.63■■□□□ 1.69
AFF3-213ENST00000445815 PZPP20742 1482 aa25.63■■□□□ 1.69
AFF3-213ENST00000445815 TNRQ92752 1358 aa25.62■■□□□ 1.69
AFF3-213ENST00000445815 KDM5DQ9BY66 1539 aa25.62■■□□□ 1.69
AFF3-213ENST00000445815 LRRC9Q6ZRR7 1453 aa25.61■■□□□ 1.69
AFF3-213ENST00000445815 VPS8Q8N3P4 1428 aa25.6■■□□□ 1.69
AFF3-213ENST00000445815 ILDR2Q71H61 639 aa25.58■■□□□ 1.69
AFF3-213ENST00000445815 MIA2Q96PC5 1412 aa25.57■■□□□ 1.68
AFF3-213ENST00000445815 LOC105371045A0A1W2PR82 267 aa25.56■■□□□ 1.68
AFF3-213ENST00000445815 MAP3K1Q13233 1512 aa25.56■■□□□ 1.68
AFF3-213ENST00000445815 UBAP1LF5GYI3 381 aa25.54■■□□□ 1.68
AFF3-213ENST00000445815 KANK4Q5T7N3 995 aaPredicted RBP25.54■■□□□ 1.68
AFF3-213ENST00000445815 THEMISQ8N1K5 641 aaPredicted RBP25.54■■□□□ 1.68
AFF3-213ENST00000445815 NLRP1Q9C000 1473 aa25.53■■□□□ 1.68
AFF3-213ENST00000445815 MAST1Q9Y2H9 1570 aa25.52■■□□□ 1.68
AFF3-213ENST00000445815 ANKLE2Q86XL3 938 aa25.52■■□□□ 1.68
AFF3-213ENST00000445815 NEURL4Q96JN8 1562 aa25.5■■□□□ 1.67
AFF3-213ENST00000445815 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.49■■□□□ 1.67
AFF3-213ENST00000445815 SOCS7O14512 581 aa25.47■■□□□ 1.67
AFF3-213ENST00000445815 RNF17Q9BXT8 1623 aaKnown RBP25.47■■□□□ 1.67
AFF3-213ENST00000445815 MED14O60244 1454 aa25.47■■□□□ 1.67
AFF3-213ENST00000445815 MYOM3Q5VTT5 1437 aa25.46■■□□□ 1.67
AFF3-213ENST00000445815 POLR1AO95602 1720 aaPredicted RBP25.46■■□□□ 1.67
AFF3-213ENST00000445815 UGGT1Q9NYU2 1555 aa25.46■■□□□ 1.67
AFF3-213ENST00000445815 SHANK2Q9UPX8 1470 aa25.46■■□□□ 1.67
AFF3-213ENST00000445815 SPATA31D1Q6ZQQ2 1576 aa25.45■■□□□ 1.66
AFF3-213ENST00000445815 CPS1P31327 1500 aa25.45■■□□□ 1.66
AFF3-213ENST00000445815 ABCC3O15438 1527 aa25.44■■□□□ 1.66
AFF3-213ENST00000445815 EIF2AK4Q9P2K8 1649 aaKnown RBP25.43■■□□□ 1.66
AFF3-213ENST00000445815 DEPDC5O75140 1603 aa25.41■■□□□ 1.66
AFF3-213ENST00000445815 ZC3H13Q5T200 1668 aaKnown RBP25.41■■□□□ 1.66
AFF3-213ENST00000445815 NPHP4O75161 1426 aaPredicted RBP25.4■■□□□ 1.66
AFF3-213ENST00000445815 TOM1O60784 492 aa25.39■■□□□ 1.66
AFF3-213ENST00000445815 MROH1Q8NDA8 1641 aa25.38■■□□□ 1.65
AFF3-213ENST00000445815 VWDEQ8N2E2 1590 aa25.38■■□□□ 1.65
AFF3-213ENST00000445815 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
AFF3-213ENST00000445815 ERVK-7P63135 1459 aa25.37■■□□□ 1.65
AFF3-213ENST00000445815 ABCC5O15440 1437 aa25.33■■□□□ 1.65
AFF3-213ENST00000445815 ARHGAP31Q2M1Z3 1444 aa25.33■■□□□ 1.65
AFF3-213ENST00000445815 HSPA1LP34931 641 aa25.31■■□□□ 1.64
AFF3-213ENST00000445815 KIF15Q9NS87 1388 aa25.31■■□□□ 1.64
AFF3-213ENST00000445815 IQGAP1P46940 1657 aa25.29■■□□□ 1.64
AFF3-213ENST00000445815 ERBINQ96RT1 1412 aa25.29■■□□□ 1.64
AFF3-213ENST00000445815 PIP4K2BP78356 416 aa25.29■■□□□ 1.64
AFF3-213ENST00000445815 RRP7BPQ9NSQ0 103 aa25.28■■□□□ 1.64
AFF3-213ENST00000445815 PRDM15P57071 1507 aaPredicted RBP25.27■■□□□ 1.64
AFF3-213ENST00000445815 APLP2Q06481 763 aa25.26■■□□□ 1.63
AFF3-213ENST00000445815 CEP152O94986 1710 aa25.26■■□□□ 1.63
AFF3-213ENST00000445815 SCAF1Q9H7N4 1312 aaKnown RBP25.25■■□□□ 1.63
AFF3-213ENST00000445815 UBR1Q8IWV7 1749 aa25.25■■□□□ 1.63
AFF3-213ENST00000445815 PTPN23Q9H3S7 1636 aa25.24■■□□□ 1.63
AFF3-213ENST00000445815 ALKQ9UM73 1620 aa25.24■■□□□ 1.63
AFF3-213ENST00000445815 ARHGAP23Q9P227 1491 aa25.24■■□□□ 1.63
AFF3-213ENST00000445815 LRRC7Q96NW7 1537 aa25.23■■□□□ 1.63
AFF3-213ENST00000445815 DAPK1P53355 1430 aa25.23■■□□□ 1.63
AFF3-213ENST00000445815 LTKP29376 864 aa25.23■■□□□ 1.63
AFF3-213ENST00000445815 SLIT1O75093 1534 aa25.22■■□□□ 1.63
AFF3-213ENST00000445815 CFAP65Q6ZU64 1925 aaKnown RBP25.22■■□□□ 1.63
AFF3-213ENST00000445815 SCAF11Q99590 1463 aaKnown RBP25.21■■□□□ 1.63
AFF3-213ENST00000445815 FGD6Q6ZV73 1430 aa25.21■■□□□ 1.63
AFF3-213ENST00000445815 CROCC2H7BZ55 1655 aa25.21■■□□□ 1.63
AFF3-213ENST00000445815 TXNDC2Q86VQ3 553 aa25.21■■□□□ 1.63
AFF3-213ENST00000445815 STRCP1A6NGW2 1772 aa25.21■■□□□ 1.63
AFF3-213ENST00000445815 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.18■■□□□ 1.62
AFF3-213ENST00000445815 KANK1Q14678 1352 aa25.18■■□□□ 1.62
AFF3-213ENST00000445815 ANKRD30AQ9BXX3 1397 aa25.17■■□□□ 1.62
AFF3-213ENST00000445815 EID1Q9Y6B2 187 aa25.16■■□□□ 1.62
AFF3-213ENST00000445815 LMTK2Q8IWU2 1503 aa25.16■■□□□ 1.62
AFF3-213ENST00000445815 TMEM2Q9UHN6 1383 aa25.15■■□□□ 1.62
AFF3-213ENST00000445815 SYNMO15061 1565 aa25.14■■□□□ 1.62
AFF3-213ENST00000445815 IDI1Q13907 227 aa25.13■■□□□ 1.61
AFF3-213ENST00000445815 CHIC2Q9UKJ5 165 aa25.12■■□□□ 1.61
AFF3-213ENST00000445815 MED1Q15648 1581 aaPredicted RBP25.12■■□□□ 1.61
AFF3-213ENST00000445815 PIK3C2BO00750 1634 aa25.1■■□□□ 1.61
AFF3-213ENST00000445815 KDM5AP29375 1690 aaKnown RBP25.1■■□□□ 1.61
AFF3-213ENST00000445815 STAG3Q9UJ98 1225 aa25.08■■□□□ 1.61
AFF3-213ENST00000445815 NOS1P29475 1434 aa25.08■■□□□ 1.61
AFF3-213ENST00000445815 ADGRL2O95490 1459 aa25.08■■□□□ 1.6
AFF3-213ENST00000445815 SLC52A1Q9NWF4 448 aa25.05■■□□□ 1.6
AFF3-213ENST00000445815 EFCAB6Q5THR3 1501 aa25.05■■□□□ 1.6
AFF3-213ENST00000445815 TET3O43151 1660 aa25.02■■□□□ 1.6
AFF3-213ENST00000445815 KCNA6P17658 529 aa25.02■■□□□ 1.6
AFF3-213ENST00000445815 XIRP1Q702N8 1843 aaKnown RBP25■■□□□ 1.59
AFF3-213ENST00000445815 ANKRD50Q9ULJ7 1429 aa24.99■■□□□ 1.59
AFF3-213ENST00000445815 RPRD2Q5VT52 1461 aaKnown RBP24.98■■□□□ 1.59
AFF3-213ENST00000445815 FAM135BQ49AJ0 1406 aa24.97■■□□□ 1.59
AFF3-213ENST00000445815 FAM50AQ14320 339 aaKnown RBP24.97■■□□□ 1.59
AFF3-213ENST00000445815 SLC26A8Q96RN1 970 aa24.96■■□□□ 1.59
AFF3-213ENST00000445815 TMEM94Q12767 1356 aa24.95■■□□□ 1.59
AFF3-213ENST00000445815 PHF23Q9BUL5 403 aaPredicted RBP24.95■■□□□ 1.58
AFF3-213ENST00000445815 ADGRB3O60242 1522 aa24.94■■□□□ 1.58
AFF3-213ENST00000445815 SENP3Q9H4L4 574 aaPredicted RBP24.92■■□□□ 1.58
AFF3-213ENST00000445815 PROSER2Q86WR7 435 aaPredicted RBP24.91■■□□□ 1.58
AFF3-213ENST00000445815 ZFYVE9O95405 1425 aa24.89■■□□□ 1.58
AFF3-213ENST00000445815 HDGFP51858 240 aaKnown RBP24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms