RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
SEC13-213ENST00000445064 ZNF142P52746 1687 aaPredicted RBP24.41■■□□□ 1.5
SEC13-213ENST00000445064 PLA2R1Q13018 1463 aa24.38■■□□□ 1.49
SEC13-213ENST00000445064 ZNF335Q9H4Z2 1342 aaPredicted RBP24.37■■□□□ 1.49
SEC13-213ENST00000445064 MAP3K1Q13233 1512 aa24.36■■□□□ 1.49
SEC13-213ENST00000445064 TNRQ92752 1358 aa24.36■■□□□ 1.49
SEC13-213ENST00000445064 A2ML1A8K2U0 1454 aa24.36■■□□□ 1.49
SEC13-213ENST00000445064 TCOF1Q13428 1488 aaKnown RBP24.36■■□□□ 1.49
SEC13-213ENST00000445064 KDM5DQ9BY66 1539 aa24.35■■□□□ 1.49
SEC13-213ENST00000445064 DNMT1P26358 1616 aaKnown RBP24.34■■□□□ 1.49
SEC13-213ENST00000445064 PZPP20742 1482 aa24.33■■□□□ 1.49
SEC13-213ENST00000445064 MYOM3Q5VTT5 1437 aa24.33■■□□□ 1.49
SEC13-213ENST00000445064 MIA2Q96PC5 1412 aa24.31■■□□□ 1.48
SEC13-213ENST00000445064 IQSEC2Q5JU85 1478 aa24.3■■□□□ 1.48
SEC13-213ENST00000445064 FAM135AQ9P2D6 1515 aa24.3■■□□□ 1.48
SEC13-213ENST00000445064 MAST1Q9Y2H9 1570 aa24.29■■□□□ 1.48
SEC13-213ENST00000445064 APLP2Q06481 763 aa24.29■■□□□ 1.48
SEC13-213ENST00000445064 THEMISQ8N1K5 641 aaPredicted RBP24.25■■□□□ 1.47
SEC13-213ENST00000445064 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.25■■□□□ 1.471e-6■■■■□ 25.4
SEC13-213ENST00000445064 ANKLE2Q86XL3 938 aa24.24■■□□□ 1.47
SEC13-213ENST00000445064 UBAP1LF5GYI3 381 aa24.23■■□□□ 1.47
SEC13-213ENST00000445064 RNF17Q9BXT8 1623 aaKnown RBP24.22■■□□□ 1.47
SEC13-213ENST00000445064 RRP7BPQ9NSQ0 103 aa24.21■■□□□ 1.47
SEC13-213ENST00000445064 ABCC3O15438 1527 aa24.2■■□□□ 1.47
SEC13-213ENST00000445064 NLRP1Q9C000 1473 aa24.2■■□□□ 1.47
SEC13-213ENST00000445064 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
SEC13-213ENST00000445064 EIF2AK4Q9P2K8 1649 aaKnown RBP24.19■■□□□ 1.46
SEC13-213ENST00000445064 NEURL4Q96JN8 1562 aa24.19■■□□□ 1.46
SEC13-213ENST00000445064 UGGT1Q9NYU2 1555 aa24.19■■□□□ 1.46
SEC13-213ENST00000445064 POLR1AO95602 1720 aaPredicted RBP24.18■■□□□ 1.46
SEC13-213ENST00000445064 DUOX2Q9NRD8 1548 aa24.18■■□□□ 1.46
SEC13-213ENST00000445064 ABCC5O15440 1437 aa24.18■■□□□ 1.46
SEC13-213ENST00000445064 ZC3H13Q5T200 1668 aaKnown RBP24.16■■□□□ 1.46
SEC13-213ENST00000445064 MROH1Q8NDA8 1641 aa24.16■■□□□ 1.46
SEC13-213ENST00000445064 PTPN23Q9H3S7 1636 aa24.16■■□□□ 1.46
SEC13-213ENST00000445064 KIF15Q9NS87 1388 aa24.16■■□□□ 1.46
SEC13-213ENST00000445064 CEP152O94986 1710 aa24.13■■□□□ 1.45
SEC13-213ENST00000445064 SPATA31D1Q6ZQQ2 1576 aa24.13■■□□□ 1.45
SEC13-213ENST00000445064 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.13■■□□□ 1.45
SEC13-213ENST00000445064 CHIC2Q9UKJ5 165 aa24.13■■□□□ 1.45
SEC13-213ENST00000445064 ERVK-7P63135 1459 aa24.13■■□□□ 1.45
SEC13-213ENST00000445064 CFAP65Q6ZU64 1925 aaKnown RBP24.12■■□□□ 1.45
SEC13-213ENST00000445064 ILDR2Q71H61 639 aa24.12■■□□□ 1.45
SEC13-213ENST00000445064 SHANK2Q9UPX8 1470 aa24.12■■□□□ 1.45
SEC13-213ENST00000445064 NPHP4O75161 1426 aaPredicted RBP24.11■■□□□ 1.45
SEC13-213ENST00000445064 DAPK1P53355 1430 aa24.11■■□□□ 1.45
SEC13-213ENST00000445064 FGD6Q6ZV73 1430 aa24.1■■□□□ 1.45
SEC13-213ENST00000445064 CROCC2H7BZ55 1655 aa24.09■■□□□ 1.45
SEC13-213ENST00000445064 MED14O60244 1454 aa24.09■■□□□ 1.45
SEC13-213ENST00000445064 DEPDC5O75140 1603 aa24.08■■□□□ 1.45
SEC13-213ENST00000445064 ERBINQ96RT1 1412 aa24.08■■□□□ 1.44
SEC13-213ENST00000445064 CPS1P31327 1500 aa24.07■■□□□ 1.44
SEC13-213ENST00000445064 PIP4K2BP78356 416 aa24.06■■□□□ 1.44
SEC13-213ENST00000445064 SCAF1Q9H7N4 1312 aaKnown RBP24.06■■□□□ 1.44
SEC13-213ENST00000445064 VWDEQ8N2E2 1590 aa24.05■■□□□ 1.44
SEC13-213ENST00000445064 TOM1O60784 492 aa24.04■■□□□ 1.44
SEC13-213ENST00000445064 PRDM15P57071 1507 aaPredicted RBP24.04■■□□□ 1.44
SEC13-213ENST00000445064 ANKRD30AQ9BXX3 1397 aa24.03■■□□□ 1.44
SEC13-213ENST00000445064 ARHGAP31Q2M1Z3 1444 aa24.03■■□□□ 1.44
SEC13-213ENST00000445064 IQGAP1P46940 1657 aa24.02■■□□□ 1.44
SEC13-213ENST00000445064 KANK1Q14678 1352 aa24.02■■□□□ 1.44
SEC13-213ENST00000445064 UBR1Q8IWV7 1749 aa24.01■■□□□ 1.43
SEC13-213ENST00000445064 LTKP29376 864 aa24■■□□□ 1.43
SEC13-213ENST00000445064 FAM50AQ14320 339 aaKnown RBP24■■□□□ 1.43
SEC13-213ENST00000445064 TXNDC2Q86VQ3 553 aa24■■□□□ 1.43
SEC13-213ENST00000445064 HSPA1LP34931 641 aa23.98■■□□□ 1.43
SEC13-213ENST00000445064 SCAF11Q99590 1463 aaKnown RBP23.95■■□□□ 1.42
SEC13-213ENST00000445064 STAG3Q9UJ98 1225 aa23.95■■□□□ 1.42
SEC13-213ENST00000445064 STRCP1A6NGW2 1772 aa23.94■■□□□ 1.42
SEC13-213ENST00000445064 IDI1Q13907 227 aa23.94■■□□□ 1.42
SEC13-213ENST00000445064 EID1Q9Y6B2 187 aa23.94■■□□□ 1.42
SEC13-213ENST00000445064 ARHGAP23Q9P227 1491 aa23.94■■□□□ 1.42
SEC13-213ENST00000445064 SOCS7O14512 581 aa23.92■■□□□ 1.42
SEC13-213ENST00000445064 SLIT1O75093 1534 aa23.92■■□□□ 1.42
SEC13-213ENST00000445064 PIK3C2BO00750 1634 aa23.92■■□□□ 1.42
SEC13-213ENST00000445064 LRRC7Q96NW7 1537 aa23.91■■□□□ 1.42
SEC13-213ENST00000445064 LMTK2Q8IWU2 1503 aa23.9■■□□□ 1.42
SEC13-213ENST00000445064 ADGRL2O95490 1459 aa23.89■■□□□ 1.42
SEC13-213ENST00000445064 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
SEC13-213ENST00000445064 ALKQ9UM73 1620 aa23.88■■□□□ 1.41
SEC13-213ENST00000445064 ANKRD50Q9ULJ7 1429 aa23.85■■□□□ 1.41
SEC13-213ENST00000445064 SENP3Q9H4L4 574 aaPredicted RBP23.85■■□□□ 1.41
SEC13-213ENST00000445064 SYNMO15061 1565 aa23.84■■□□□ 1.41
SEC13-213ENST00000445064 EFCAB6Q5THR3 1501 aa23.84■■□□□ 1.41
SEC13-213ENST00000445064 NOS1P29475 1434 aa23.84■■□□□ 1.41
SEC13-213ENST00000445064 SLC52A1Q9NWF4 448 aa23.81■■□□□ 1.4
SEC13-213ENST00000445064 SLC26A8Q96RN1 970 aa23.8■■□□□ 1.4
SEC13-213ENST00000445064 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
SEC13-213ENST00000445064 PPARGC1BQ86YN6 1023 aaKnown RBP23.78■■□□□ 1.4
SEC13-213ENST00000445064 BCANQ96GW7 911 aa23.76■■□□□ 1.39
SEC13-213ENST00000445064 MED1Q15648 1581 aaPredicted RBP23.75■■□□□ 1.39
SEC13-213ENST00000445064 KCNA6P17658 529 aa23.75■■□□□ 1.39
SEC13-213ENST00000445064 TET3O43151 1660 aa23.74■■□□□ 1.39
SEC13-213ENST00000445064 ITGAEP38570 1179 aa23.74■■□□□ 1.39
SEC13-213ENST00000445064 XIRP1Q702N8 1843 aaKnown RBP23.74■■□□□ 1.39
SEC13-213ENST00000445064 RPRD2Q5VT52 1461 aaKnown RBP23.74■■□□□ 1.39
SEC13-213ENST00000445064 ADGRB3O60242 1522 aa23.74■■□□□ 1.39
SEC13-213ENST00000445064 RBM33Q96EV2 1170 aaKnown RBP23.73■■□□□ 1.39
SEC13-213ENST00000445064 PROSER2Q86WR7 435 aaPredicted RBP23.72■■□□□ 1.39
SEC13-213ENST00000445064 TMEM94Q12767 1356 aa23.7■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms