RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 ITGAEP38570 1179 aa26.19■■□□□ 1.78
LIME1-202ENST00000444951 ARHGEF5Q12774 1597 aa26.16■■□□□ 1.78
LIME1-202ENST00000444951 LTBP4Q8N2S1 1624 aa26.16■■□□□ 1.78
LIME1-202ENST00000444951 CEP170BQ9Y4F5 1589 aaPredicted RBP26.16■■□□□ 1.78
LIME1-202ENST00000444951 NCKAP5LQ9HCH0 1330 aa26.14■■□□□ 1.77
LIME1-202ENST00000444951 KIF3BO15066 747 aa26.13■■□□□ 1.77
LIME1-202ENST00000444951 PPP6R1Q9UPN7 881 aa26.13■■□□□ 1.77
LIME1-202ENST00000444951 DAPK1P53355 1430 aa26.09■■□□□ 1.77
LIME1-202ENST00000444951 RSPH4AQ5TD94 716 aa26.09■■□□□ 1.77
LIME1-202ENST00000444951 DNMT1P26358 1616 aaKnown RBP26.09■■□□□ 1.77
LIME1-202ENST00000444951 KDM5DQ9BY66 1539 aa26.09■■□□□ 1.77
LIME1-202ENST00000444951 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.08■■□□□ 1.77
LIME1-202ENST00000444951 ABCC5O15440 1437 aa26.08■■□□□ 1.77
LIME1-202ENST00000444951 CHIC2Q9UKJ5 165 aa26.08■■□□□ 1.77
LIME1-202ENST00000444951 PLA2R1Q13018 1463 aa26.07■■□□□ 1.76
LIME1-202ENST00000444951 TSPY4P0CV99 314 aa26.07■■□□□ 1.76
LIME1-202ENST00000444951 TSPY10P0CW01 314 aa26.07■■□□□ 1.76
LIME1-202ENST00000444951 FBXO31Q5XUX0 539 aaPredicted RBP26.07■■□□□ 1.76
LIME1-202ENST00000444951 A2ML1A8K2U0 1454 aa26.04■■□□□ 1.76
LIME1-202ENST00000444951 MAST1Q9Y2H9 1570 aa26.04■■□□□ 1.76
LIME1-202ENST00000444951 PZPP20742 1482 aa26.04■■□□□ 1.76
LIME1-202ENST00000444951 CROCC2H7BZ55 1655 aa26.03■■□□□ 1.76
LIME1-202ENST00000444951 FAM135AQ9P2D6 1515 aa26.03■■□□□ 1.76
LIME1-202ENST00000444951 TRIM26Q12899 539 aaPredicted RBP26.02■■□□□ 1.76
LIME1-202ENST00000444951 ZNF335Q9H4Z2 1342 aaPredicted RBP26.02■■□□□ 1.76
LIME1-202ENST00000444951 TNRQ92752 1358 aa26.01■■□□□ 1.75
LIME1-202ENST00000444951 WASHC2CQ9Y4E1 1318 aa26■■□□□ 1.75
LIME1-202ENST00000444951 RNF17Q9BXT8 1623 aaKnown RBP25.99■■□□□ 1.75
LIME1-202ENST00000444951 PKD2Q13563 968 aa25.99■■□□□ 1.75
LIME1-202ENST00000444951 SHANK2Q9UPX8 1470 aa25.97■■□□□ 1.75
LIME1-202ENST00000444951 IQSEC2Q5JU85 1478 aa25.96■■□□□ 1.75
LIME1-202ENST00000444951 MROH1Q8NDA8 1641 aa25.96■■□□□ 1.75
LIME1-202ENST00000444951 NEURL4Q96JN8 1562 aa25.95■■□□□ 1.74
LIME1-202ENST00000444951 ABCC3O15438 1527 aa25.94■■□□□ 1.74
LIME1-202ENST00000444951 RRP7BPQ9NSQ0 103 aa25.93■■□□□ 1.74
LIME1-202ENST00000444951 POLR1AO95602 1720 aaPredicted RBP25.93■■□□□ 1.74
LIME1-202ENST00000444951 EIF2AK4Q9P2K8 1649 aaKnown RBP25.92■■□□□ 1.74
LIME1-202ENST00000444951 ANKRD30AQ9BXX3 1397 aa25.91■■□□□ 1.74
LIME1-202ENST00000444951 CEP152O94986 1710 aa25.89■■□□□ 1.74
LIME1-202ENST00000444951 ZC3H13Q5T200 1668 aaKnown RBP25.89■■□□□ 1.73
LIME1-202ENST00000444951 ADGRL2O95490 1459 aa25.86■■□□□ 1.73
LIME1-202ENST00000444951 NLRP1Q9C000 1473 aa25.86■■□□□ 1.73
LIME1-202ENST00000444951 KIF15Q9NS87 1388 aa25.86■■□□□ 1.73
LIME1-202ENST00000444951 DUOX2Q9NRD8 1548 aa25.86■■□□□ 1.73
LIME1-202ENST00000444951 SPATA31D1Q6ZQQ2 1576 aa25.86■■□□□ 1.73
LIME1-202ENST00000444951 PCGF6Q9BYE7 350 aa25.85■■□□□ 1.73
LIME1-202ENST00000444951 UGGT1Q9NYU2 1555 aa25.85■■□□□ 1.73
LIME1-202ENST00000444951 ERVK-7P63135 1459 aa25.84■■□□□ 1.73
LIME1-202ENST00000444951 ROCK1Q13464 1354 aa25.83■■□□□ 1.73
LIME1-202ENST00000444951 CFAP65Q6ZU64 1925 aaKnown RBP25.83■■□□□ 1.73
LIME1-202ENST00000444951 PRDM15P57071 1507 aaPredicted RBP25.78■■□□□ 1.72
LIME1-202ENST00000444951 UBAP1LF5GYI3 381 aa25.78■■□□□ 1.72
LIME1-202ENST00000444951 THEMISQ8N1K5 641 aaPredicted RBP25.78■■□□□ 1.72
LIME1-202ENST00000444951 DEPDC5O75140 1603 aa25.77■■□□□ 1.72
LIME1-202ENST00000444951 ANKLE2Q86XL3 938 aa25.77■■□□□ 1.72
LIME1-202ENST00000444951 VWDEQ8N2E2 1590 aa25.77■■□□□ 1.72
LIME1-202ENST00000444951 DISP3Q9P2K9 1392 aa25.76■■□□□ 1.71
LIME1-202ENST00000444951 ERBINQ96RT1 1412 aa25.76■■□□□ 1.71
LIME1-202ENST00000444951 MED14O60244 1454 aa25.75■■□□□ 1.71
LIME1-202ENST00000444951 NPHP4O75161 1426 aaPredicted RBP25.75■■□□□ 1.71
LIME1-202ENST00000444951 NAIPQ13075 1403 aa25.75■■□□□ 1.71
LIME1-202ENST00000444951 HFM1A2PYH4 1435 aa25.74■■□□□ 1.71
LIME1-202ENST00000444951 GCC2Q8IWJ2 1684 aa25.74■■□□□ 1.71
LIME1-202ENST00000444951 UBR1Q8IWV7 1749 aa25.73■■□□□ 1.71
LIME1-202ENST00000444951 ANKRD50Q9ULJ7 1429 aa25.72■■□□□ 1.71
LIME1-202ENST00000444951 IQGAP1P46940 1657 aa25.72■■□□□ 1.71
LIME1-202ENST00000444951 CPS1P31327 1500 aa25.72■■□□□ 1.71
LIME1-202ENST00000444951 ILDR2Q71H61 639 aa25.7■■□□□ 1.7
LIME1-202ENST00000444951 SETD5Q9C0A6 1442 aa25.7■■□□□ 1.7
LIME1-202ENST00000444951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.69■■□□□ 1.7
LIME1-202ENST00000444951 ARHGAP31Q2M1Z3 1444 aa25.69■■□□□ 1.7
LIME1-202ENST00000444951 STRCP1A6NGW2 1772 aa25.69■■□□□ 1.7
LIME1-202ENST00000444951 RAB3GAP2Q9H2M9 1393 aa25.64■■□□□ 1.69
LIME1-202ENST00000444951 ALKQ9UM73 1620 aa25.63■■□□□ 1.69
LIME1-202ENST00000444951 ARHGAP23Q9P227 1491 aa25.62■■□□□ 1.69
LIME1-202ENST00000444951 PIK3C2BO00750 1634 aa25.62■■□□□ 1.69
LIME1-202ENST00000444951 LMTK2Q8IWU2 1503 aa25.61■■□□□ 1.69
LIME1-202ENST00000444951 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
LIME1-202ENST00000444951 SLIT1O75093 1534 aa25.6■■□□□ 1.69
LIME1-202ENST00000444951 LTKP29376 864 aa25.6■■□□□ 1.69
LIME1-202ENST00000444951 PIP4K2BP78356 416 aa25.6■■□□□ 1.69
LIME1-202ENST00000444951 TRIM52Q96A61 297 aa25.6■■□□□ 1.69
LIME1-202ENST00000444951 KANK1Q14678 1352 aa25.58■■□□□ 1.69
LIME1-202ENST00000444951 SCAF1Q9H7N4 1312 aaKnown RBP25.58■■□□□ 1.69
LIME1-202ENST00000444951 SYNMO15061 1565 aa25.57■■□□□ 1.68
LIME1-202ENST00000444951 LRRC7Q96NW7 1537 aa25.57■■□□□ 1.68
LIME1-202ENST00000444951 EFCAB6Q5THR3 1501 aa25.55■■□□□ 1.68
LIME1-202ENST00000444951 HSPA1LP34931 641 aa25.55■■□□□ 1.68
LIME1-202ENST00000444951 TOM1O60784 492 aa25.54■■□□□ 1.68
LIME1-202ENST00000444951 TXNDC2Q86VQ3 553 aa25.54■■□□□ 1.68
LIME1-202ENST00000444951 UNC13BO14795 1591 aa25.52■■□□□ 1.68
LIME1-202ENST00000444951 NUP155O75694 1391 aa25.52■■□□□ 1.68
LIME1-202ENST00000444951 IDI1Q13907 227 aa25.51■■□□□ 1.67
LIME1-202ENST00000444951 NOS1P29475 1434 aa25.51■■□□□ 1.67
LIME1-202ENST00000444951 TMEM2Q9UHN6 1383 aa25.5■■□□□ 1.67
LIME1-202ENST00000444951 KDM5AP29375 1690 aaKnown RBP25.48■■□□□ 1.67
LIME1-202ENST00000444951 XIRP1Q702N8 1843 aaKnown RBP25.47■■□□□ 1.67
LIME1-202ENST00000444951 STAG3Q9UJ98 1225 aa25.45■■□□□ 1.66
LIME1-202ENST00000444951 EID1Q9Y6B2 187 aa25.45■■□□□ 1.66
LIME1-202ENST00000444951 ADGRB3O60242 1522 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms