RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 GPIHBP1Q8IV16 184 aa5.51□□□□□ -1.53
UBR3-206ENST00000444475 PARP9Q8IXQ6 854 aa5.51□□□□□ -1.53
UBR3-206ENST00000444475 RAB11FIP3O75154 756 aa5.5□□□□□ -1.53
UBR3-206ENST00000444475 RBM27Q9P2N5 1060 aaKnown RBP5.5□□□□□ -1.53
UBR3-206ENST00000444475 OXER1Q8TDS5 423 aa5.5□□□□□ -1.53
UBR3-206ENST00000444475 CDCA7Q9BWT1 371 aaPredicted RBP5.5□□□□□ -1.53
UBR3-206ENST00000444475 GNEQ9Y223 722 aaKnown RBP5.5□□□□□ -1.53
UBR3-206ENST00000444475 U3KPZ7 1027 aaPredicted RBP5.5□□□□□ -1.53
UBR3-206ENST00000444475 MCCP23508 829 aa5.49□□□□□ -1.53
UBR3-206ENST00000444475 KRI1Q8N9T8 703 aaKnown RBP5.49□□□□□ -1.53
UBR3-206ENST00000444475 EVI5LQ96CN4 794 aa5.49□□□□□ -1.53
UBR3-206ENST00000444475 DMRT2Q9Y5R5 561 aa5.49□□□□□ -1.53
UBR3-206ENST00000444475 GPATCH3Q96I76 525 aa5.49□□□□□ -1.53
UBR3-206ENST00000444475 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.49□□□□□ -1.539e-7■□□□□ 10.8
UBR3-206ENST00000444475 ZNF16P17020 682 aaPredicted RBP5.48□□□□□ -1.53
UBR3-206ENST00000444475 RBM46Q8TBY0 533 aaKnown RBP5.48□□□□□ -1.53
UBR3-206ENST00000444475 VAMP1P23763 118 aa5.47□□□□□ -1.53
UBR3-206ENST00000444475 GPATCH11Q8N954 259 aa5.47□□□□□ -1.53
UBR3-206ENST00000444475 TERF2IPQ9NYB0 399 aa5.47□□□□□ -1.53
UBR3-206ENST00000444475 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.47□□□□□ -1.53
UBR3-206ENST00000444475 PPFIA4O75335 1185 aa5.47□□□□□ -1.53
UBR3-206ENST00000444475 RPS6KL1Q9Y6S9 549 aa5.47□□□□□ -1.53
UBR3-206ENST00000444475 ACIN1Q9UKV3 1341 aaKnown RBP5.47□□□□□ -1.53
UBR3-206ENST00000444475 CARNS1A5YM72 827 aa5.46□□□□□ -1.53
UBR3-206ENST00000444475 ZC3H6P61129 1189 aaKnown RBP5.46□□□□□ -1.53
UBR3-206ENST00000444475 APBB1IPQ7Z5R6 666 aaPredicted RBP5.46□□□□□ -1.54
UBR3-206ENST00000444475 NISCHQ9Y2I1 1504 aa5.46□□□□□ -1.54
UBR3-206ENST00000444475 LARGE2Q8N3Y3 721 aa5.46□□□□□ -1.54
UBR3-206ENST00000444475 PBXIP1Q96AQ6 731 aa5.46□□□□□ -1.54
UBR3-206ENST00000444475 KCNG1Q9UIX4 513 aa5.46□□□□□ -1.54
UBR3-206ENST00000444475 TMEM88BA6NKF7 163 aa5.45□□□□□ -1.54
UBR3-206ENST00000444475 MAMSTRQ6ZN01 415 aa5.45□□□□□ -1.54
UBR3-206ENST00000444475 SPINK5Q9NQ38 1064 aaPredicted RBP5.45□□□□□ -1.54
UBR3-206ENST00000444475 STK24Q9Y6E0 443 aa5.45□□□□□ -1.54
UBR3-206ENST00000444475 GSE1Q14687 1217 aa5.45□□□□□ -1.54
UBR3-206ENST00000444475 GORABQ5T7V8 394 aa5.45□□□□□ -1.54
UBR3-206ENST00000444475 MIER1Q8N108 512 aa5.45□□□□□ -1.54
UBR3-206ENST00000444475 ANO8Q9HCE9 1232 aaPredicted RBP5.44□□□□□ -1.54
UBR3-206ENST00000444475 MLLT3P42568 568 aaPredicted RBP5.44□□□□□ -1.54
UBR3-206ENST00000444475 RALBP1Q15311 655 aa5.44□□□□□ -1.54
UBR3-206ENST00000444475 CCDC181Q5TID7 509 aa5.44□□□□□ -1.54
UBR3-206ENST00000444475 UBA5Q9GZZ9 404 aa5.44□□□□□ -1.54
UBR3-206ENST00000444475 PSME1Q06323 249 aa5.44□□□□□ -1.54
UBR3-206ENST00000444475 SMC5Q8IY18 1101 aa5.44□□□□□ -1.54
UBR3-206ENST00000444475 ZNF330Q9Y3S2 320 aaPredicted RBP5.43□□□□□ -1.54
UBR3-206ENST00000444475 PTMSP20962 102 aa5.43□□□□□ -1.54
UBR3-206ENST00000444475 NUBP1P53384 320 aa5.43□□□□□ -1.54
UBR3-206ENST00000444475 FAM50AQ14320 339 aaKnown RBP5.43□□□□□ -1.54
UBR3-206ENST00000444475 SBNO2Q9Y2G9 1366 aa5.43□□□□□ -1.54
UBR3-206ENST00000444475 PARNO95453 639 aaKnown RBP5.43□□□□□ -1.54
UBR3-206ENST00000444475 DPH6Q7L8W6 267 aa5.43□□□□□ -1.54
UBR3-206ENST00000444475 NPAS4Q8IUM7 802 aa5.43□□□□□ -1.54
UBR3-206ENST00000444475 MAP4K4O95819 1239 aaPredicted RBP5.42□□□□□ -1.54
UBR3-206ENST00000444475 ERCC3P19447 782 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 SH3D19Q5HYK7 790 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 PCMTD1Q96MG8 357 aaPredicted RBP5.42□□□□□ -1.54
UBR3-206ENST00000444475 MAF1Q9H063 256 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 ZBTB47Q9UFB7 747 aaPredicted RBP5.42□□□□□ -1.54
UBR3-206ENST00000444475 SPDYE2BA6NHP3 402 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 SPDYE5A6NIY4 337 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 SPDYE6P0CI01 402 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 SPDYE2Q495Y8 402 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 EGFLAMQ63HQ2 1017 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 METTL14Q9HCE5 456 aaKnown RBP5.42□□□□□ -1.54
UBR3-206ENST00000444475 KLHL42Q9P2K6 505 aa5.42□□□□□ -1.54
UBR3-206ENST00000444475 MAGEC2Q9UBF1 373 aaPredicted RBP5.42□□□□□ -1.54
UBR3-206ENST00000444475 CCDC194A0A1B0GVG4 234 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 C7P10643 843 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 MS4A1P11836 297 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 APLP1P51693 650 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 SF3A1Q15459 793 aaKnown RBP5.41□□□□□ -1.54
UBR3-206ENST00000444475 FOXD4L6Q3SYB3 417 aaPredicted RBP5.41□□□□□ -1.54
UBR3-206ENST00000444475 CFAP70Q5T0N1 1121 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 FOXD4L3Q6VB84 417 aaPredicted RBP5.41□□□□□ -1.54
UBR3-206ENST00000444475 TBC1D2Q9BYX2 928 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 RBM10P98175 930 aaKnown RBP5.41□□□□□ -1.54
UBR3-206ENST00000444475 ABCC9O60706 1549 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 NAALADL2Q58DX5 795 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 CLEC4GQ6UXB4 293 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 NOP9Q86U38 636 aaKnown RBP5.41□□□□□ -1.54
UBR3-206ENST00000444475 MORC4Q8TE76 937 aa5.41□□□□□ -1.54
UBR3-206ENST00000444475 MINK1Q8N4C8 1332 aaPredicted RBP5.4□□□□□ -1.54
UBR3-206ENST00000444475 NCKAP5LQ9HCH0 1330 aa5.4□□□□□ -1.54
UBR3-206ENST00000444475 CCDC102AQ96A19 550 aa5.4□□□□□ -1.54
UBR3-206ENST00000444475 CAMK2BQ13554 666 aa5.4□□□□□ -1.54
UBR3-206ENST00000444475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.4□□□□□ -1.55
UBR3-206ENST00000444475 GLMNQ92990 594 aa5.4□□□□□ -1.55
UBR3-206ENST00000444475 SECISBP2LQ93073 1101 aaKnown RBP5.4□□□□□ -1.55
UBR3-206ENST00000444475 RECKO95980 971 aa5.39□□□□□ -1.55
UBR3-206ENST00000444475 EIF3JO75822 258 aaKnown RBP5.39□□□□□ -1.55
UBR3-206ENST00000444475 MFSD10Q14728 455 aa5.39□□□□□ -1.55
UBR3-206ENST00000444475 LONRF3Q496Y0 759 aa5.38□□□□□ -1.55
UBR3-206ENST00000444475 PMM1Q92871 262 aa5.38□□□□□ -1.55
UBR3-206ENST00000444475 POM121CA8CG34 1229 aa5.38□□□□□ -1.55
UBR3-206ENST00000444475 MAP2K5Q13163 448 aa5.38□□□□□ -1.55
UBR3-206ENST00000444475 TLDC2A0PJX2 215 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 IRF6O14896 467 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 U2SURPO15042 1029 aaKnown RBP5.37□□□□□ -1.55
UBR3-206ENST00000444475 KCNB2Q92953 911 aa5.37□□□□□ -1.55
UBR3-206ENST00000444475 SPACA7Q96KW9 195 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms