RNA–Protein interactions for RNA: ENST00000443551.2

C2orf88-205, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 692 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-205ENST00000443551 PTPRKQ15262 1439 aa25.15■■□□□ 1.62
C2orf88-205ENST00000443551 KDM5DQ9BY66 1539 aa25.15■■□□□ 1.62
C2orf88-205ENST00000443551 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
C2orf88-205ENST00000443551 DUOX2Q9NRD8 1548 aa25.14■■□□□ 1.62
C2orf88-205ENST00000443551 WASHC2CQ9Y4E1 1318 aa25.12■■□□□ 1.61
C2orf88-205ENST00000443551 STRCQ7RTU9 1775 aa25.12■■□□□ 1.61
C2orf88-205ENST00000443551 KIF15Q9NS87 1388 aa25.11■■□□□ 1.61
C2orf88-205ENST00000443551 MYO3AQ8NEV4 1616 aa25.08■■□□□ 1.61
C2orf88-205ENST00000443551 FAM50AQ14320 339 aaKnown RBP25.08■■□□□ 1.61
C2orf88-205ENST00000443551 RRP7BPQ9NSQ0 103 aa25.08■■□□□ 1.61
C2orf88-205ENST00000443551 PZPP20742 1482 aa25.07■■□□□ 1.6
C2orf88-205ENST00000443551 ZNF142P52746 1687 aaPredicted RBP25.07■■□□□ 1.6
C2orf88-205ENST00000443551 MROH1Q8NDA8 1641 aa25.06■■□□□ 1.6
C2orf88-205ENST00000443551 CHIC2Q9UKJ5 165 aa25.06■■□□□ 1.6
C2orf88-205ENST00000443551 ZC3H13Q5T200 1668 aaKnown RBP25.06■■□□□ 1.6
C2orf88-205ENST00000443551 ANKRD30AQ9BXX3 1397 aa25.05■■□□□ 1.6
C2orf88-205ENST00000443551 ERBINQ96RT1 1412 aa25.05■■□□□ 1.6
C2orf88-205ENST00000443551 ABCC3O15438 1527 aa25.04■■□□□ 1.6
C2orf88-205ENST00000443551 CEP170BQ9Y4F5 1589 aaPredicted RBP25.03■■□□□ 1.6
C2orf88-205ENST00000443551 NCOA1Q15788 1441 aa25.03■■□□□ 1.6
C2orf88-205ENST00000443551 FBXO31Q5XUX0 539 aaPredicted RBP25.02■■□□□ 1.6
C2orf88-205ENST00000443551 DMRT2Q9Y5R5 561 aa25.02■■□□□ 1.6
C2orf88-205ENST00000443551 CEP152O94986 1710 aa25.01■■□□□ 1.59
C2orf88-205ENST00000443551 ADGRL2O95490 1459 aa25.01■■□□□ 1.59
C2orf88-205ENST00000443551 CAMSAP1Q5T5Y3 1602 aa25.01■■□□□ 1.59
C2orf88-205ENST00000443551 PPARGC1BQ86YN6 1023 aaKnown RBP25■■□□□ 1.59
C2orf88-205ENST00000443551 CFAP65Q6ZU64 1925 aaKnown RBP24.99■■□□□ 1.59
C2orf88-205ENST00000443551 TNRQ92752 1358 aa24.99■■□□□ 1.59
C2orf88-205ENST00000443551 PRDM15P57071 1507 aaPredicted RBP24.98■■□□□ 1.59
C2orf88-205ENST00000443551 ILDR1Q86SU0 546 aaPredicted RBP24.98■■□□□ 1.59
C2orf88-205ENST00000443551 DEPDC5O75140 1603 aa24.97■■□□□ 1.59
C2orf88-205ENST00000443551 A2ML1A8K2U0 1454 aa24.97■■□□□ 1.59
C2orf88-205ENST00000443551 PTPRTO14522 1441 aa24.95■■□□□ 1.59
C2orf88-205ENST00000443551 PLA2R1Q13018 1463 aa24.93■■□□□ 1.58
C2orf88-205ENST00000443551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.92■■□□□ 1.58
C2orf88-205ENST00000443551 SPATA31D1Q6ZQQ2 1576 aa24.92■■□□□ 1.58
C2orf88-205ENST00000443551 KANK1Q14678 1352 aa24.9■■□□□ 1.58
C2orf88-205ENST00000443551 NLRP1Q9C000 1473 aa24.89■■□□□ 1.58
C2orf88-205ENST00000443551 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.89■■□□□ 1.57
C2orf88-205ENST00000443551 ERVK-7P63135 1459 aa24.89■■□□□ 1.57
C2orf88-205ENST00000443551 NCKAP5LQ9HCH0 1330 aa24.88■■□□□ 1.57
C2orf88-205ENST00000443551 PKD2Q13563 968 aa24.88■■□□□ 1.57
C2orf88-205ENST00000443551 ARHGAP31Q2M1Z3 1444 aa24.87■■□□□ 1.57
C2orf88-205ENST00000443551 ANKRD50Q9ULJ7 1429 aa24.87■■□□□ 1.57
C2orf88-205ENST00000443551 VWDEQ8N2E2 1590 aa24.87■■□□□ 1.57
C2orf88-205ENST00000443551 ROCK1Q13464 1354 aa24.84■■□□□ 1.57
C2orf88-205ENST00000443551 FBXO41Q8TF61 875 aa24.84■■□□□ 1.57
C2orf88-205ENST00000443551 LMTK2Q8IWU2 1503 aa24.84■■□□□ 1.57
C2orf88-205ENST00000443551 UGGT1Q9NYU2 1555 aa24.84■■□□□ 1.57
C2orf88-205ENST00000443551 CERKQ8TCT0 537 aa24.83■■□□□ 1.57
C2orf88-205ENST00000443551 POLR1AO95602 1720 aaPredicted RBP24.82■■□□□ 1.56
C2orf88-205ENST00000443551 ITGAEP38570 1179 aa24.81■■□□□ 1.56
C2orf88-205ENST00000443551 THEMISQ8N1K5 641 aaPredicted RBP24.81■■□□□ 1.56
C2orf88-205ENST00000443551 RRBP1Q9P2E9 1410 aaKnown RBP24.79■■□□□ 1.56
C2orf88-205ENST00000443551 EFCAB6Q5THR3 1501 aa24.76■■□□□ 1.55
C2orf88-205ENST00000443551 UBR1Q8IWV7 1749 aa24.75■■□□□ 1.55
C2orf88-205ENST00000443551 UNC13BO14795 1591 aa24.75■■□□□ 1.55
C2orf88-205ENST00000443551 NEURL4Q96JN8 1562 aa24.75■■□□□ 1.55
C2orf88-205ENST00000443551 LTBP4Q8N2S1 1624 aa24.75■■□□□ 1.55
C2orf88-205ENST00000443551 ANKLE2Q86XL3 938 aa24.74■■□□□ 1.55
C2orf88-205ENST00000443551 TET3O43151 1660 aa24.72■■□□□ 1.55
C2orf88-205ENST00000443551 GCC2Q8IWJ2 1684 aa24.69■■□□□ 1.54
C2orf88-205ENST00000443551 PIK3C2BO00750 1634 aa24.69■■□□□ 1.54
C2orf88-205ENST00000443551 RPRD2Q5VT52 1461 aaKnown RBP24.69■■□□□ 1.54
C2orf88-205ENST00000443551 NOS1P29475 1434 aa24.69■■□□□ 1.54
C2orf88-205ENST00000443551 SYNMO15061 1565 aa24.68■■□□□ 1.54
C2orf88-205ENST00000443551 ZNF335Q9H4Z2 1342 aaPredicted RBP24.68■■□□□ 1.54
C2orf88-205ENST00000443551 MED14O60244 1454 aa24.67■■□□□ 1.54
C2orf88-205ENST00000443551 IQGAP3Q86VI3 1631 aa24.66■■□□□ 1.54
C2orf88-205ENST00000443551 KDM5AP29375 1690 aaKnown RBP24.66■■□□□ 1.54
C2orf88-205ENST00000443551 NPHP4O75161 1426 aaPredicted RBP24.65■■□□□ 1.54
C2orf88-205ENST00000443551 IDI1Q13907 227 aa24.64■■□□□ 1.54
C2orf88-205ENST00000443551 IQGAP1P46940 1657 aa24.64■■□□□ 1.53
C2orf88-205ENST00000443551 SLIT1O75093 1534 aa24.63■■□□□ 1.53
C2orf88-205ENST00000443551 ARHGAP23Q9P227 1491 aa24.63■■□□□ 1.53
C2orf88-205ENST00000443551 STAG3Q9UJ98 1225 aa24.62■■□□□ 1.53
C2orf88-205ENST00000443551 IQSEC2Q5JU85 1478 aa24.62■■□□□ 1.53
C2orf88-205ENST00000443551 E9PCH4 1651 aa24.62■■□□□ 1.53
C2orf88-205ENST00000443551 NUP155O75694 1391 aa24.61■■□□□ 1.53
C2orf88-205ENST00000443551 SCAF11Q99590 1463 aaKnown RBP24.6■■□□□ 1.53
C2orf88-205ENST00000443551 SLC52A1Q9NWF4 448 aa24.6■■□□□ 1.53
C2orf88-205ENST00000443551 TXNDC2Q86VQ3 553 aa24.58■■□□□ 1.53
C2orf88-205ENST00000443551 TMEM2Q9UHN6 1383 aa24.57■■□□□ 1.52
C2orf88-205ENST00000443551 LTKP29376 864 aa24.57■■□□□ 1.52
C2orf88-205ENST00000443551 NAIPQ13075 1403 aa24.57■■□□□ 1.52
C2orf88-205ENST00000443551 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
C2orf88-205ENST00000443551 EID1Q9Y6B2 187 aa24.56■■□□□ 1.52
C2orf88-205ENST00000443551 MYO5BQ9ULV0 1848 aa24.54■■□□□ 1.52
C2orf88-205ENST00000443551 CPS1P31327 1500 aa24.52■■□□□ 1.52
C2orf88-205ENST00000443551 HFM1A2PYH4 1435 aa24.51■■□□□ 1.51
C2orf88-205ENST00000443551 TMEM131LA2VDJ0 1609 aa24.49■■□□□ 1.51
C2orf88-205ENST00000443551 STRCP1A6NGW2 1772 aa24.48■■□□□ 1.51
C2orf88-205ENST00000443551 SPHKAPQ2M3C7 1700 aa24.45■■□□□ 1.5
C2orf88-205ENST00000443551 ZFYVE9O95405 1425 aa24.42■■□□□ 1.5
C2orf88-205ENST00000443551 UBAP1LF5GYI3 381 aa24.41■■□□□ 1.5
C2orf88-205ENST00000443551 CHGAP10645 457 aaKnown RBP24.41■■□□□ 1.5
C2orf88-205ENST00000443551 RIMS2Q9UQ26 1411 aa24.4■■□□□ 1.5
C2orf88-205ENST00000443551 HDGFP51858 240 aaKnown RBP24.39■■□□□ 1.49
C2orf88-205ENST00000443551 TRIM52Q96A61 297 aa24.39■■□□□ 1.49
C2orf88-205ENST00000443551 LRRC7Q96NW7 1537 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms