RNA–Protein interactions for RNA: ENST00000443222.5

ARPC1B-209, Transcript of actin related protein 2/3 complex subunit 1B, humanhuman

TSL 2

Gene ARPC1B, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC1B-209ENST00000443222 RNF17Q9BXT8 1623 aaKnown RBP24.24■■□□□ 1.47
ARPC1B-209ENST00000443222 KDM5DQ9BY66 1539 aa24.24■■□□□ 1.47
ARPC1B-209ENST00000443222 EIF2AK4Q9P2K8 1649 aaKnown RBP24.23■■□□□ 1.47
ARPC1B-209ENST00000443222 DUOX2Q9NRD8 1548 aa24.21■■□□□ 1.47
ARPC1B-209ENST00000443222 MROH1Q8NDA8 1641 aa24.21■■□□□ 1.47
ARPC1B-209ENST00000443222 STRCQ7RTU9 1775 aa24.2■■□□□ 1.46
ARPC1B-209ENST00000443222 KIF15Q9NS87 1388 aa24.18■■□□□ 1.46
ARPC1B-209ENST00000443222 MYO3AQ8NEV4 1616 aa24.17■■□□□ 1.46
ARPC1B-209ENST00000443222 PZPP20742 1482 aa24.17■■□□□ 1.46
ARPC1B-209ENST00000443222 ZNF142P52746 1687 aaPredicted RBP24.16■■□□□ 1.46
ARPC1B-209ENST00000443222 ABCC3O15438 1527 aa24.15■■□□□ 1.46
ARPC1B-209ENST00000443222 WASHC2CQ9Y4E1 1318 aa24.14■■□□□ 1.46
ARPC1B-209ENST00000443222 ERBINQ96RT1 1412 aa24.14■■□□□ 1.45
ARPC1B-209ENST00000443222 CEP170BQ9Y4F5 1589 aaPredicted RBP24.12■■□□□ 1.45
ARPC1B-209ENST00000443222 NCOA1Q15788 1441 aa24.12■■□□□ 1.45
ARPC1B-209ENST00000443222 RRP7BPQ9NSQ0 103 aa24.12■■□□□ 1.45
ARPC1B-209ENST00000443222 ADGRL2O95490 1459 aa24.12■■□□□ 1.45
ARPC1B-209ENST00000443222 ZC3H13Q5T200 1668 aaKnown RBP24.11■■□□□ 1.45
ARPC1B-209ENST00000443222 FBXO31Q5XUX0 539 aaPredicted RBP24.11■■□□□ 1.45
ARPC1B-209ENST00000443222 PRDM15P57071 1507 aaPredicted RBP24.1■■□□□ 1.45
ARPC1B-209ENST00000443222 CAMSAP1Q5T5Y3 1602 aa24.1■■□□□ 1.45
ARPC1B-209ENST00000443222 ANKRD30AQ9BXX3 1397 aa24.09■■□□□ 1.45
ARPC1B-209ENST00000443222 ILDR1Q86SU0 546 aaPredicted RBP24.09■■□□□ 1.45
ARPC1B-209ENST00000443222 CHIC2Q9UKJ5 165 aa24.09■■□□□ 1.45
ARPC1B-209ENST00000443222 FAM50AQ14320 339 aaKnown RBP24.08■■□□□ 1.45
ARPC1B-209ENST00000443222 DEPDC5O75140 1603 aa24.08■■□□□ 1.45
ARPC1B-209ENST00000443222 A2ML1A8K2U0 1454 aa24.07■■□□□ 1.44
ARPC1B-209ENST00000443222 TNRQ92752 1358 aa24.07■■□□□ 1.44
ARPC1B-209ENST00000443222 PTPRTO14522 1441 aa24.06■■□□□ 1.44
ARPC1B-209ENST00000443222 CEP152O94986 1710 aa24.05■■□□□ 1.44
ARPC1B-209ENST00000443222 PLA2R1Q13018 1463 aa24.05■■□□□ 1.44
ARPC1B-209ENST00000443222 SPATA31D1Q6ZQQ2 1576 aa24.03■■□□□ 1.44
ARPC1B-209ENST00000443222 DMRT2Q9Y5R5 561 aa24.03■■□□□ 1.44
ARPC1B-209ENST00000443222 PPARGC1BQ86YN6 1023 aaKnown RBP24.02■■□□□ 1.44
ARPC1B-209ENST00000443222 VWDEQ8N2E2 1590 aa24.01■■□□□ 1.43
ARPC1B-209ENST00000443222 ERVK-7P63135 1459 aa24■■□□□ 1.43
ARPC1B-209ENST00000443222 ARHGAP31Q2M1Z3 1444 aa23.99■■□□□ 1.43
ARPC1B-209ENST00000443222 NLRP1Q9C000 1473 aa23.99■■□□□ 1.43
ARPC1B-209ENST00000443222 LMTK2Q8IWU2 1503 aa23.97■■□□□ 1.43
ARPC1B-209ENST00000443222 NCKAP5LQ9HCH0 1330 aa23.97■■□□□ 1.43
ARPC1B-209ENST00000443222 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.97■■□□□ 1.43
ARPC1B-209ENST00000443222 ANKRD50Q9ULJ7 1429 aa23.94■■□□□ 1.42
ARPC1B-209ENST00000443222 FBXO41Q8TF61 875 aa23.94■■□□□ 1.42
ARPC1B-209ENST00000443222 ROCK1Q13464 1354 aa23.93■■□□□ 1.42
ARPC1B-209ENST00000443222 PKD2Q13563 968 aa23.93■■□□□ 1.42
ARPC1B-209ENST00000443222 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.93■■□□□ 1.423e-7■□□□□ 9.7
ARPC1B-209ENST00000443222 CERKQ8TCT0 537 aa23.92■■□□□ 1.42
ARPC1B-209ENST00000443222 UGGT1Q9NYU2 1555 aa23.91■■□□□ 1.42
ARPC1B-209ENST00000443222 LTBP4Q8N2S1 1624 aa23.91■■□□□ 1.42
ARPC1B-209ENST00000443222 KANK1Q14678 1352 aa23.91■■□□□ 1.42
ARPC1B-209ENST00000443222 RRBP1Q9P2E9 1410 aaKnown RBP23.9■■□□□ 1.42
ARPC1B-209ENST00000443222 NEURL4Q96JN8 1562 aa23.9■■□□□ 1.42
ARPC1B-209ENST00000443222 EFCAB6Q5THR3 1501 aa23.87■■□□□ 1.41
ARPC1B-209ENST00000443222 UNC13BO14795 1591 aa23.86■■□□□ 1.41
ARPC1B-209ENST00000443222 POLR1AO95602 1720 aaPredicted RBP23.85■■□□□ 1.41
ARPC1B-209ENST00000443222 THEMISQ8N1K5 641 aaPredicted RBP23.85■■□□□ 1.41
ARPC1B-209ENST00000443222 CFAP65Q6ZU64 1925 aaKnown RBP23.83■■□□□ 1.41
ARPC1B-209ENST00000443222 UBR1Q8IWV7 1749 aa23.83■■□□□ 1.41
ARPC1B-209ENST00000443222 NOS1P29475 1434 aa23.83■■□□□ 1.4
ARPC1B-209ENST00000443222 SYNMO15061 1565 aa23.82■■□□□ 1.4
ARPC1B-209ENST00000443222 MED14O60244 1454 aa23.81■■□□□ 1.4
ARPC1B-209ENST00000443222 ITGAEP38570 1179 aa23.8■■□□□ 1.4
ARPC1B-209ENST00000443222 ZNF335Q9H4Z2 1342 aaPredicted RBP23.8■■□□□ 1.4
ARPC1B-209ENST00000443222 ANKLE2Q86XL3 938 aa23.78■■□□□ 1.4
ARPC1B-209ENST00000443222 ARHGAP23Q9P227 1491 aa23.78■■□□□ 1.4
ARPC1B-209ENST00000443222 TET3O43151 1660 aa23.78■■□□□ 1.4
ARPC1B-209ENST00000443222 PIK3C2BO00750 1634 aa23.77■■□□□ 1.4
ARPC1B-209ENST00000443222 RPRD2Q5VT52 1461 aaKnown RBP23.77■■□□□ 1.4
ARPC1B-209ENST00000443222 SLIT1O75093 1534 aa23.76■■□□□ 1.39
ARPC1B-209ENST00000443222 NPHP4O75161 1426 aaPredicted RBP23.75■■□□□ 1.39
ARPC1B-209ENST00000443222 IQGAP3Q86VI3 1631 aa23.74■■□□□ 1.39
ARPC1B-209ENST00000443222 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
ARPC1B-209ENST00000443222 GCC2Q8IWJ2 1684 aa23.73■■□□□ 1.39
ARPC1B-209ENST00000443222 IDI1Q13907 227 aa23.73■■□□□ 1.39
ARPC1B-209ENST00000443222 KDM5AP29375 1690 aaKnown RBP23.72■■□□□ 1.39
ARPC1B-209ENST00000443222 IQGAP1P46940 1657 aa23.71■■□□□ 1.39
ARPC1B-209ENST00000443222 SCAF11Q99590 1463 aaKnown RBP23.7■■□□□ 1.38
ARPC1B-209ENST00000443222 LTKP29376 864 aa23.69■■□□□ 1.38
ARPC1B-209ENST00000443222 E9PCH4 1651 aa23.69■■□□□ 1.38
ARPC1B-209ENST00000443222 NAIPQ13075 1403 aa23.68■■□□□ 1.38
ARPC1B-209ENST00000443222 ADGRB3O60242 1522 aa23.68■■□□□ 1.38
ARPC1B-209ENST00000443222 TMEM2Q9UHN6 1383 aa23.67■■□□□ 1.38
ARPC1B-209ENST00000443222 NUP155O75694 1391 aa23.66■■□□□ 1.38
ARPC1B-209ENST00000443222 SLC52A1Q9NWF4 448 aa23.65■■□□□ 1.38
ARPC1B-209ENST00000443222 CPS1P31327 1500 aa23.63■■□□□ 1.37
ARPC1B-209ENST00000443222 TXNDC2Q86VQ3 553 aa23.62■■□□□ 1.37
ARPC1B-209ENST00000443222 HFM1A2PYH4 1435 aa23.61■■□□□ 1.37
ARPC1B-209ENST00000443222 STAG3Q9UJ98 1225 aa23.59■■□□□ 1.37
ARPC1B-209ENST00000443222 STRCP1A6NGW2 1772 aa23.59■■□□□ 1.37
ARPC1B-209ENST00000443222 TMEM131LA2VDJ0 1609 aa23.59■■□□□ 1.37
ARPC1B-209ENST00000443222 EID1Q9Y6B2 187 aa23.57■■□□□ 1.36
ARPC1B-209ENST00000443222 ZFYVE9O95405 1425 aa23.57■■□□□ 1.36
ARPC1B-209ENST00000443222 MYO5BQ9ULV0 1848 aa23.54■■□□□ 1.36
ARPC1B-209ENST00000443222 LRRC7Q96NW7 1537 aa23.51■■□□□ 1.35
ARPC1B-209ENST00000443222 SPHKAPQ2M3C7 1700 aa23.5■■□□□ 1.35
ARPC1B-209ENST00000443222 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
ARPC1B-209ENST00000443222 ALKQ9UM73 1620 aa23.48■■□□□ 1.35
ARPC1B-209ENST00000443222 UBAP1LF5GYI3 381 aa23.47■■□□□ 1.35
ARPC1B-209ENST00000443222 PLEKHG1Q9ULL1 1385 aa23.46■■□□□ 1.35
ARPC1B-209ENST00000443222 TRPM2O94759 1503 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms