RNA–Protein interactions for RNA: ENST00000442441.5

TMEM50B-204, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 982 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-204ENST00000442441 CCDC141Q6ZP82 1450 aa32.83■■■□□ 2.85
TMEM50B-204ENST00000442441 TNRQ92752 1358 aa32.82■■■□□ 2.84
TMEM50B-204ENST00000442441 FBXO31Q5XUX0 539 aaPredicted RBP32.81■■■□□ 2.84
TMEM50B-204ENST00000442441 KDM5DQ9BY66 1539 aa32.79■■■□□ 2.84
TMEM50B-204ENST00000442441 FAM135AQ9P2D6 1515 aa32.79■■■□□ 2.84
TMEM50B-204ENST00000442441 RSPH4AQ5TD94 716 aa32.79■■■□□ 2.84
TMEM50B-204ENST00000442441 PZPP20742 1482 aa32.79■■■□□ 2.84
TMEM50B-204ENST00000442441 CAMSAP2Q08AD1 1489 aa32.79■■■□□ 2.84
TMEM50B-204ENST00000442441 NCOA2Q15596 1464 aa32.78■■■□□ 2.84
TMEM50B-204ENST00000442441 WASHC2CQ9Y4E1 1318 aa32.76■■■□□ 2.83
TMEM50B-204ENST00000442441 POLR1AO95602 1720 aaPredicted RBP32.75■■■□□ 2.83
TMEM50B-204ENST00000442441 NEURL4Q96JN8 1562 aa32.74■■■□□ 2.83
TMEM50B-204ENST00000442441 CPS1P31327 1500 aa32.69■■■□□ 2.82
TMEM50B-204ENST00000442441 SHANK2Q9UPX8 1470 aa32.68■■■□□ 2.82
TMEM50B-204ENST00000442441 ANKLE2Q86XL3 938 aa32.68■■■□□ 2.82
TMEM50B-204ENST00000442441 MIA2Q96PC5 1412 aa32.68■■■□□ 2.82
TMEM50B-204ENST00000442441 ARHGEF5Q12774 1597 aa32.67■■■□□ 2.82
TMEM50B-204ENST00000442441 THEMISQ8N1K5 641 aaPredicted RBP32.67■■■□□ 2.82
TMEM50B-204ENST00000442441 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.67■■■□□ 2.82
TMEM50B-204ENST00000442441 TSPY4P0CV99 314 aa32.66■■■□□ 2.82
TMEM50B-204ENST00000442441 TSPY10P0CW01 314 aa32.66■■■□□ 2.82
TMEM50B-204ENST00000442441 NLRP1Q9C000 1473 aa32.66■■■□□ 2.82
TMEM50B-204ENST00000442441 TOM1O60784 492 aa32.64■■■□□ 2.82
TMEM50B-204ENST00000442441 SCAF1Q9H7N4 1312 aaKnown RBP32.63■■■□□ 2.81
TMEM50B-204ENST00000442441 UGGT1Q9NYU2 1555 aa32.62■■■□□ 2.81
TMEM50B-204ENST00000442441 PIP4K2BP78356 416 aa32.61■■■□□ 2.81
TMEM50B-204ENST00000442441 HSPA1LP34931 641 aa32.6■■■□□ 2.81
TMEM50B-204ENST00000442441 VWDEQ8N2E2 1590 aa32.58■■■□□ 2.81
TMEM50B-204ENST00000442441 MED14O60244 1454 aa32.58■■■□□ 2.81
TMEM50B-204ENST00000442441 NPHP4O75161 1426 aaPredicted RBP32.58■■■□□ 2.81
TMEM50B-204ENST00000442441 DEPDC5O75140 1603 aa32.57■■■□□ 2.8
TMEM50B-204ENST00000442441 RNF17Q9BXT8 1623 aaKnown RBP32.55■■■□□ 2.8
TMEM50B-204ENST00000442441 LRRC9Q6ZRR7 1453 aa32.53■■■□□ 2.8
TMEM50B-204ENST00000442441 ABCC3O15438 1527 aa32.52■■■□□ 2.8
TMEM50B-204ENST00000442441 MAST1Q9Y2H9 1570 aa32.52■■■□□ 2.8
TMEM50B-204ENST00000442441 ZC3H13Q5T200 1668 aaKnown RBP32.5■■■□□ 2.79
TMEM50B-204ENST00000442441 IQGAP1P46940 1657 aa32.49■■■□□ 2.79
TMEM50B-204ENST00000442441 MED1Q15648 1581 aaPredicted RBP32.49■■■□□ 2.79
TMEM50B-204ENST00000442441 VPS8Q8N3P4 1428 aa32.47■■■□□ 2.79
TMEM50B-204ENST00000442441 EIF2AK4Q9P2K8 1649 aaKnown RBP32.47■■■□□ 2.79
TMEM50B-204ENST00000442441 ERVK-7P63135 1459 aa32.45■■■□□ 2.79
TMEM50B-204ENST00000442441 ALKQ9UM73 1620 aa32.43■■■□□ 2.78
TMEM50B-204ENST00000442441 MROH1Q8NDA8 1641 aa32.42■■■□□ 2.78
TMEM50B-204ENST00000442441 KANK4Q5T7N3 995 aaPredicted RBP32.39■■■□□ 2.78
TMEM50B-204ENST00000442441 MYOM3Q5VTT5 1437 aa32.38■■■□□ 2.77
TMEM50B-204ENST00000442441 STRCP1A6NGW2 1772 aa32.37■■■□□ 2.77
TMEM50B-204ENST00000442441 LRRC7Q96NW7 1537 aa32.37■■■□□ 2.77
TMEM50B-204ENST00000442441 MAP3K1Q13233 1512 aa32.36■■■□□ 2.77
TMEM50B-204ENST00000442441 CEP152O94986 1710 aa32.36■■■□□ 2.77
TMEM50B-204ENST00000442441 DUOX2Q9NRD8 1548 aa32.36■■■□□ 2.77
TMEM50B-204ENST00000442441 UBR1Q8IWV7 1749 aa32.34■■■□□ 2.77
TMEM50B-204ENST00000442441 CFAP65Q6ZU64 1925 aaKnown RBP32.34■■■□□ 2.77
TMEM50B-204ENST00000442441 SYNMO15061 1565 aa32.33■■■□□ 2.77
TMEM50B-204ENST00000442441 SCAF11Q99590 1463 aaKnown RBP32.3■■■□□ 2.76
TMEM50B-204ENST00000442441 LOC105371045A0A1W2PR82 267 aa32.3■■■□□ 2.76
TMEM50B-204ENST00000442441 ARHGAP31Q2M1Z3 1444 aa32.27■■■□□ 2.76
TMEM50B-204ENST00000442441 PHF23Q9BUL5 403 aaPredicted RBP32.27■■■□□ 2.76
TMEM50B-204ENST00000442441 LTKP29376 864 aa32.26■■■□□ 2.75
TMEM50B-204ENST00000442441 KIF15Q9NS87 1388 aa32.26■■■□□ 2.75
TMEM50B-204ENST00000442441 ARHGAP23Q9P227 1491 aa32.26■■■□□ 2.75
TMEM50B-204ENST00000442441 SLIT1O75093 1534 aa32.26■■■□□ 2.75
TMEM50B-204ENST00000442441 PRDM15P57071 1507 aaPredicted RBP32.26■■■□□ 2.75
TMEM50B-204ENST00000442441 TXNDC2Q86VQ3 553 aa32.25■■■□□ 2.75
TMEM50B-204ENST00000442441 SENP3Q9H4L4 574 aaPredicted RBP32.24■■■□□ 2.75
TMEM50B-204ENST00000442441 ERBINQ96RT1 1412 aa32.23■■■□□ 2.75
TMEM50B-204ENST00000442441 RRP7BPQ9NSQ0 103 aa32.21■■■□□ 2.75
TMEM50B-204ENST00000442441 ABCC5O15440 1437 aa32.2■■■□□ 2.75
TMEM50B-204ENST00000442441 CROCC2H7BZ55 1655 aa32.19■■■□□ 2.74
TMEM50B-204ENST00000442441 EID1Q9Y6B2 187 aa32.19■■■□□ 2.74
TMEM50B-204ENST00000442441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.17■■■□□ 2.74
TMEM50B-204ENST00000442441 PTPN23Q9H3S7 1636 aa32.15■■■□□ 2.74
TMEM50B-204ENST00000442441 PIK3C2BO00750 1634 aa32.14■■■□□ 2.74
TMEM50B-204ENST00000442441 KANK1Q14678 1352 aa32.13■■■□□ 2.73
TMEM50B-204ENST00000442441 TMEM2Q9UHN6 1383 aa32.13■■■□□ 2.73
TMEM50B-204ENST00000442441 DAPK1P53355 1430 aa32.11■■■□□ 2.73
TMEM50B-204ENST00000442441 STAG3Q9UJ98 1225 aa32.11■■■□□ 2.73
TMEM50B-204ENST00000442441 XIRP1Q702N8 1843 aaKnown RBP32.11■■■□□ 2.73
TMEM50B-204ENST00000442441 KDM5AP29375 1690 aaKnown RBP32.06■■■□□ 2.72
TMEM50B-204ENST00000442441 APLP2Q06481 763 aa32.06■■■□□ 2.72
TMEM50B-204ENST00000442441 EFCAB6Q5THR3 1501 aa32.05■■■□□ 2.72
TMEM50B-204ENST00000442441 LMTK2Q8IWU2 1503 aa32.05■■■□□ 2.72
TMEM50B-204ENST00000442441 IDI1Q13907 227 aa32.05■■■□□ 2.72
TMEM50B-204ENST00000442441 FGD6Q6ZV73 1430 aa32.04■■■□□ 2.72
TMEM50B-204ENST00000442441 ANKRD30AQ9BXX3 1397 aa32.04■■■□□ 2.72
TMEM50B-204ENST00000442441 CHIC2Q9UKJ5 165 aa32.02■■■□□ 2.72
TMEM50B-204ENST00000442441 FAM135BQ49AJ0 1406 aa32.01■■■□□ 2.72
TMEM50B-204ENST00000442441 TMEM94Q12767 1356 aa32■■■□□ 2.71
TMEM50B-204ENST00000442441 KCNA6P17658 529 aa32■■■□□ 2.71
TMEM50B-204ENST00000442441 RGS17Q9UGC6 210 aaPredicted RBP31.98■■■□□ 2.71
TMEM50B-204ENST00000442441 TET3O43151 1660 aa31.97■■■□□ 2.71
TMEM50B-204ENST00000442441 SLC26A8Q96RN1 970 aa31.97■■■□□ 2.71
TMEM50B-204ENST00000442441 NOS1P29475 1434 aa31.96■■■□□ 2.71
TMEM50B-204ENST00000442441 PROSER2Q86WR7 435 aaPredicted RBP31.93■■■□□ 2.7
TMEM50B-204ENST00000442441 ADGRB3O60242 1522 aa31.92■■■□□ 2.7
TMEM50B-204ENST00000442441 SLC52A1Q9NWF4 448 aa31.91■■■□□ 2.7
TMEM50B-204ENST00000442441 RBM33Q96EV2 1170 aaKnown RBP31.89■■■□□ 2.7
TMEM50B-204ENST00000442441 ROBO1Q9Y6N7 1651 aa31.87■■■□□ 2.69
TMEM50B-204ENST00000442441 ADGRL2O95490 1459 aa31.87■■■□□ 2.69
TMEM50B-204ENST00000442441 NKTRP30414 1462 aaKnown RBP31.87■■■□□ 2.69
TMEM50B-204ENST00000442441 NWD1Q149M9 1564 aa31.85■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms