RNA–Protein interactions for RNA: ENST00000441986.5

HDAC9-215, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 584 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-215ENST00000441986 SPAG9O60271 1321 aaKnown RBP10.04□□□□□ -0.8
HDAC9-215ENST00000441986 NCKAP5LQ9HCH0 1330 aa10.04□□□□□ -0.8
HDAC9-215ENST00000441986 HNRNPMP52272 730 aaKnown RBP eCLIP10.03□□□□□ -0.8
HDAC9-215ENST00000441986 NCOA1Q15788 1441 aa10.03□□□□□ -0.8
HDAC9-215ENST00000441986 DIP2CQ9Y2E4 1556 aa10.03□□□□□ -0.8
HDAC9-215ENST00000441986 NPATQ14207 1427 aa10.02□□□□□ -0.81
HDAC9-215ENST00000441986 LTBP4Q8N2S1 1624 aa10.02□□□□□ -0.81
HDAC9-215ENST00000441986 C3P01024 1663 aa10.02□□□□□ -0.81
HDAC9-215ENST00000441986 GGT6Q6P531 493 aa10.01□□□□□ -0.81
HDAC9-215ENST00000441986 ZNF335Q9H4Z2 1342 aaPredicted RBP10.01□□□□□ -0.81
HDAC9-215ENST00000441986 CFDP1Q9UEE9 299 aaPredicted RBP10□□□□□ -0.81
HDAC9-215ENST00000441986 CASKIN1Q8WXD9 1431 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 CDC42BPBQ9Y5S2 1711 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 CCDC18Q5T9S5 1454 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 KLHL34Q8N239 644 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 PLCD3Q8N3E9 789 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 SPOCK2Q92563 424 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 SPATA31D1Q6ZQQ2 1576 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 CAMSAP1Q5T5Y3 1602 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 ABCA6Q8N139 1617 aa9.99□□□□□ -0.81
HDAC9-215ENST00000441986 ABCC1P33527 1531 aa9.98□□□□□ -0.81
HDAC9-215ENST00000441986 TOM1O60784 492 aa9.98□□□□□ -0.81
HDAC9-215ENST00000441986 KIAA1107Q9UPP5 1409 aa9.97□□□□□ -0.81
HDAC9-215ENST00000441986 KIDINS220Q9ULH0 1771 aa9.96□□□□□ -0.81
HDAC9-215ENST00000441986 MIER1Q8N108 512 aa9.96□□□□□ -0.82
HDAC9-215ENST00000441986 PREX2Q70Z35 1606 aa9.96□□□□□ -0.82
HDAC9-215ENST00000441986 PIP4K2BP78356 416 aa9.95□□□□□ -0.82
HDAC9-215ENST00000441986 PLA2R1Q13018 1463 aa9.95□□□□□ -0.82
HDAC9-215ENST00000441986 PLEKHH2Q8IVE3 1493 aa9.95□□□□□ -0.82
HDAC9-215ENST00000441986 GPATCH8Q9UKJ3 1502 aaKnown RBP9.95□□□□□ -0.82
HDAC9-215ENST00000441986 SAMD9LQ8IVG5 1584 aa9.95□□□□□ -0.82
HDAC9-215ENST00000441986 A2MP01023 1474 aa9.94□□□□□ -0.82
HDAC9-215ENST00000441986 PTPRKQ15262 1439 aa9.94□□□□□ -0.82
HDAC9-215ENST00000441986 CCNB3Q8WWL7 1395 aa9.94□□□□□ -0.82
HDAC9-215ENST00000441986 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
HDAC9-215ENST00000441986 ITSN2Q9NZM3 1697 aa9.93□□□□□ -0.82
HDAC9-215ENST00000441986 HSPA1LP34931 641 aa9.93□□□□□ -0.82
HDAC9-215ENST00000441986 ANKLE2Q86XL3 938 aa9.93□□□□□ -0.82
HDAC9-215ENST00000441986 THEMISQ8N1K5 641 aaPredicted RBP9.93□□□□□ -0.82
HDAC9-215ENST00000441986 RBM42Q9BTD8 480 aaKnown RBP9.93□□□□□ -0.82
HDAC9-215ENST00000441986 TCOF1Q13428 1488 aaKnown RBP9.92□□□□□ -0.82
HDAC9-215ENST00000441986 LRRIQ1Q96JM4 1722 aa9.91□□□□□ -0.82
HDAC9-215ENST00000441986 WASHC2CQ9Y4E1 1318 aa9.91□□□□□ -0.82
HDAC9-215ENST00000441986 RSPH4AQ5TD94 716 aa9.91□□□□□ -0.82
HDAC9-215ENST00000441986 FBXO31Q5XUX0 539 aaPredicted RBP9.91□□□□□ -0.82
HDAC9-215ENST00000441986 FYCO1Q9BQS8 1478 aa9.91□□□□□ -0.82
HDAC9-215ENST00000441986 CDC42BPAQ5VT25 1732 aa9.9□□□□□ -0.82
HDAC9-215ENST00000441986 SUPT6HQ7KZ85 1726 aaKnown RBP9.9□□□□□ -0.82
HDAC9-215ENST00000441986 MTUS2Q5JR59 1369 aa9.9□□□□□ -0.82
HDAC9-215ENST00000441986 KIF3BO15066 747 aa9.9□□□□□ -0.82
HDAC9-215ENST00000441986 ATP7AQ04656 1500 aa9.9□□□□□ -0.82
HDAC9-215ENST00000441986 SYCP2Q9BX26 1530 aa9.9□□□□□ -0.82
HDAC9-215ENST00000441986 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
HDAC9-215ENST00000441986 CEP170BQ9Y4F5 1589 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-215ENST00000441986 ZNF644Q9H582 1327 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-215ENST00000441986 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
HDAC9-215ENST00000441986 ZBTB47Q9UFB7 747 aaPredicted RBP9.89□□□□□ -0.83
HDAC9-215ENST00000441986 A2ML1A8K2U0 1454 aa9.89□□□□□ -0.83
HDAC9-215ENST00000441986 CLTCQ00610 1675 aaKnown RBP9.89□□□□□ -0.83
HDAC9-215ENST00000441986 RTEL1-TNFRSF6BF6WH68 1400 aa9.89□□□□□ -0.83
HDAC9-215ENST00000441986 AKT1S1Q96B36 256 aa9.88□□□□□ -0.83
HDAC9-215ENST00000441986 TNRQ92752 1358 aa9.88□□□□□ -0.83
HDAC9-215ENST00000441986 SHANK2Q9UPX8 1470 aa9.87□□□□□ -0.83
HDAC9-215ENST00000441986 TSPY4P0CV99 314 aa9.87□□□□□ -0.83
HDAC9-215ENST00000441986 TSPY10P0CW01 314 aa9.87□□□□□ -0.83
HDAC9-215ENST00000441986 PLXNC1O60486 1568 aa9.87□□□□□ -0.83
HDAC9-215ENST00000441986 CPS1P31327 1500 aa9.87□□□□□ -0.83
HDAC9-215ENST00000441986 MYO3AQ8NEV4 1616 aa9.86□□□□□ -0.83
HDAC9-215ENST00000441986 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.86□□□□□ -0.83
HDAC9-215ENST00000441986 ZNF142P52746 1687 aaPredicted RBP9.85□□□□□ -0.83
HDAC9-215ENST00000441986 DNMT1P26358 1616 aaKnown RBP9.85□□□□□ -0.83
HDAC9-215ENST00000441986 MBD5Q9P267 1494 aa9.85□□□□□ -0.83
HDAC9-215ENST00000441986 INO80Q9ULG1 1556 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-215ENST00000441986 MIA2Q96PC5 1412 aa9.84□□□□□ -0.83
HDAC9-215ENST00000441986 ECM2O94769 699 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-215ENST00000441986 SPDYE1Q8NFV5 336 aaPredicted RBP9.84□□□□□ -0.83
HDAC9-215ENST00000441986 ADGBQ8N7X0 1667 aa9.83□□□□□ -0.84
HDAC9-215ENST00000441986 PZPP20742 1482 aa9.82□□□□□ -0.84
HDAC9-215ENST00000441986 FAM135AQ9P2D6 1515 aa9.82□□□□□ -0.84
HDAC9-215ENST00000441986 NPHP4O75161 1426 aaPredicted RBP9.82□□□□□ -0.84
HDAC9-215ENST00000441986 NLRP1Q9C000 1473 aa9.81□□□□□ -0.84
HDAC9-215ENST00000441986 PLCB2Q00722 1185 aa9.81□□□□□ -0.84
HDAC9-215ENST00000441986 MED1Q15648 1581 aaPredicted RBP9.8□□□□□ -0.84
HDAC9-215ENST00000441986 MED14O60244 1454 aa9.8□□□□□ -0.84
HDAC9-215ENST00000441986 UGGT1Q9NYU2 1555 aa9.8□□□□□ -0.84
HDAC9-215ENST00000441986 CEP162Q5TB80 1403 aa9.79□□□□□ -0.84
HDAC9-215ENST00000441986 KDM5DQ9BY66 1539 aa9.78□□□□□ -0.84
HDAC9-215ENST00000441986 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
HDAC9-215ENST00000441986 CCDC141Q6ZP82 1450 aa9.78□□□□□ -0.84
HDAC9-215ENST00000441986 NEURL4Q96JN8 1562 aa9.77□□□□□ -0.85
HDAC9-215ENST00000441986 REM2Q8IYK8 340 aaPredicted RBP9.77□□□□□ -0.85
HDAC9-215ENST00000441986 EID1Q9Y6B2 187 aa9.77□□□□□ -0.85
HDAC9-215ENST00000441986 TIAM1Q13009 1591 aa9.76□□□□□ -0.85
HDAC9-215ENST00000441986 VWDEQ8N2E2 1590 aa9.76□□□□□ -0.85
HDAC9-215ENST00000441986 EHBP1L1Q8N3D4 1523 aa9.76□□□□□ -0.85
HDAC9-215ENST00000441986 POLR1AO95602 1720 aaPredicted RBP9.76□□□□□ -0.85
HDAC9-215ENST00000441986 DEPDC5O75140 1603 aa9.75□□□□□ -0.85
HDAC9-215ENST00000441986 LRRC7Q96NW7 1537 aa9.75□□□□□ -0.85
HDAC9-215ENST00000441986 LTKP29376 864 aa9.74□□□□□ -0.85
HDAC9-215ENST00000441986 RGS17Q9UGC6 210 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms