RNA–Protein interactions for RNA: ENST00000441560.6

ATL1-202, Transcript of atlastin GTPase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATL1, Length 2,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1-202ENST00000441560 POLR1AO95602 1720 aaPredicted RBP12.54□□□□□ -0.4
ATL1-202ENST00000441560 TBC1D2Q9BYX2 928 aa12.54□□□□□ -0.4
ATL1-202ENST00000441560 OFD1O75665 1012 aa12.53□□□□□ -0.4
ATL1-202ENST00000441560 DMTNQ08495 405 aa12.53□□□□□ -0.4
ATL1-202ENST00000441560 ANP32BQ92688 251 aaKnown RBP12.53□□□□□ -0.4
ATL1-202ENST00000441560 R3HCC1Q9Y3T6 440 aaKnown RBP12.53□□□□□ -0.4
ATL1-202ENST00000441560 KIF15Q9NS87 1388 aa12.53□□□□□ -0.4
ATL1-202ENST00000441560 AMER1Q5JTC6 1135 aaPredicted RBP12.52□□□□□ -0.4
ATL1-202ENST00000441560 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.41
ATL1-202ENST00000441560 UTP14CQ5TAP6 766 aaKnown RBP12.52□□□□□ -0.41
ATL1-202ENST00000441560 BIVM-ERCC5R4GMW8 1640 aa12.51□□□□□ -0.41
ATL1-202ENST00000441560 RALBP1Q15311 655 aa12.51□□□□□ -0.41
ATL1-202ENST00000441560 USP47Q96K76 1375 aa12.51□□□□□ -0.41
ATL1-202ENST00000441560 MIA2Q96PC5 1412 aa12.51□□□□□ -0.41
ATL1-202ENST00000441560 MSNP26038 577 aaKnown RBP12.51□□□□□ -0.41
ATL1-202ENST00000441560 ZSCAN30Q86W11 494 aa12.5□□□□□ -0.41
ATL1-202ENST00000441560 GAS2L3Q86XJ1 694 aa12.5□□□□□ -0.41
ATL1-202ENST00000441560 UPF2Q9HAU5 1272 aaKnown RBP12.5□□□□□ -0.41
ATL1-202ENST00000441560 ISY1Q9ULR0 285 aaKnown RBP12.5□□□□□ -0.41
ATL1-202ENST00000441560 ZFP91Q96JP5 570 aaPredicted RBP12.49□□□□□ -0.41
ATL1-202ENST00000441560 TNNT2P45379 298 aaPredicted RBP12.49□□□□□ -0.41
ATL1-202ENST00000441560 MTUS2Q5JR59 1369 aa12.48□□□□□ -0.41
ATL1-202ENST00000441560 CUX1P39880 1505 aa12.48□□□□□ -0.41
ATL1-202ENST00000441560 NLRP13Q86W25 1043 aa12.48□□□□□ -0.41
ATL1-202ENST00000441560 FTSJ3Q8IY81 847 aaKnown RBP12.48□□□□□ -0.41
ATL1-202ENST00000441560 UQCRHLA0A096LP55 91 aa12.48□□□□□ -0.41
ATL1-202ENST00000441560 UQCRHP07919 91 aa12.48□□□□□ -0.41
ATL1-202ENST00000441560 ZSCAN20P17040 1043 aaPredicted RBP12.48□□□□□ -0.41
ATL1-202ENST00000441560 DHX37Q8IY37 1157 aaKnown RBP12.48□□□□□ -0.41
ATL1-202ENST00000441560 BCORL1Q5H9F3 1711 aa12.48□□□□□ -0.41
ATL1-202ENST00000441560 CHMP5Q9NZZ3 219 aa12.48□□□□□ -0.41
ATL1-202ENST00000441560 TERF1P54274 439 aa12.47□□□□□ -0.41
ATL1-202ENST00000441560 FHOD3Q2V2M9 1422 aa12.47□□□□□ -0.41
ATL1-202ENST00000441560 TEX14Q8IWB6 1497 aa12.47□□□□□ -0.41
ATL1-202ENST00000441560 DDX11L8A8MPP1 907 aa12.47□□□□□ -0.41
ATL1-202ENST00000441560 ROCK2O75116 1388 aaKnown RBP12.46□□□□□ -0.41
ATL1-202ENST00000441560 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.46□□□□□ -0.42
ATL1-202ENST00000441560 HECW1Q76N89 1606 aa12.46□□□□□ -0.42
ATL1-202ENST00000441560 RPRD2Q5VT52 1461 aaKnown RBP12.45□□□□□ -0.42
ATL1-202ENST00000441560 MTERF4Q7Z6M4 381 aaKnown RBP12.45□□□□□ -0.42
ATL1-202ENST00000441560 IGHDP01880 384 aa12.45□□□□□ -0.42
ATL1-202ENST00000441560 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
ATL1-202ENST00000441560 TBC1D32Q96NH3 1257 aa12.45□□□□□ -0.42
ATL1-202ENST00000441560 NLRP1Q9C000 1473 aa12.45□□□□□ -0.42
ATL1-202ENST00000441560 ANKRD30BQ9BXX2 1392 aa12.44□□□□□ -0.42
ATL1-202ENST00000441560 ZBTB22O15209 634 aa12.44□□□□□ -0.42
ATL1-202ENST00000441560 NASPP49321 788 aaPredicted RBP12.43□□□□□ -0.42
ATL1-202ENST00000441560 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
ATL1-202ENST00000441560 FYCO1Q9BQS8 1478 aa12.43□□□□□ -0.42
ATL1-202ENST00000441560 XPCQ01831 940 aaPredicted RBP12.43□□□□□ -0.42
ATL1-202ENST00000441560 MAPK8IP3Q9UPT6 1336 aa12.42□□□□□ -0.42
ATL1-202ENST00000441560 KDM6BO15054 1643 aa12.42□□□□□ -0.42
ATL1-202ENST00000441560 IGF1RP08069 1367 aa12.41□□□□□ -0.42
ATL1-202ENST00000441560 CASKIN1Q8WXD9 1431 aa12.41□□□□□ -0.42
ATL1-202ENST00000441560 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
ATL1-202ENST00000441560 KIF20AO95235 890 aa12.4□□□□□ -0.42
ATL1-202ENST00000441560 SECISBP2LQ93073 1101 aaKnown RBP12.4□□□□□ -0.42
ATL1-202ENST00000441560 PPP1R9BQ96SB3 815 aa12.4□□□□□ -0.42
ATL1-202ENST00000441560 CCDC94Q9BW85 323 aaPredicted RBP12.4□□□□□ -0.42
ATL1-202ENST00000441560 VIRMAQ69YN4 1812 aaKnown RBP12.4□□□□□ -0.42
ATL1-202ENST00000441560 CARMIL1Q5VZK9 1371 aa12.4□□□□□ -0.42
ATL1-202ENST00000441560 CDK11BP21127 795 aaKnown RBP12.4□□□□□ -0.43
ATL1-202ENST00000441560 DUSP27Q5VZP5 1158 aa12.4□□□□□ -0.43
ATL1-202ENST00000441560 SLC4A1APQ9BWU0 796 aaKnown RBP12.4□□□□□ -0.43
ATL1-202ENST00000441560 BRD2P25440 801 aaKnown RBP12.38□□□□□ -0.43
ATL1-202ENST00000441560 DNTTIP2Q5QJE6 756 aaKnown RBP12.38□□□□□ -0.43
ATL1-202ENST00000441560 CC2D1BQ5T0F9 858 aaKnown RBP12.37□□□□□ -0.43
ATL1-202ENST00000441560 CARD11Q9BXL7 1154 aa12.37□□□□□ -0.43
ATL1-202ENST00000441560 GTPBP4Q9BZE4 634 aaKnown RBP12.37□□□□□ -0.43
ATL1-202ENST00000441560 ST20-MTHFSA0A0A6YYL1 179 aa12.37□□□□□ -0.43
ATL1-202ENST00000441560 E9PSI1 815 aa12.37□□□□□ -0.43
ATL1-202ENST00000441560 CBX1P83916 185 aa12.37□□□□□ -0.43
ATL1-202ENST00000441560 CHMP4AQ9BY43 222 aa12.37□□□□□ -0.43
ATL1-202ENST00000441560 TEX2Q8IWB9 1127 aa12.36□□□□□ -0.43
ATL1-202ENST00000441560 EIF3AQ14152 1382 aaKnown RBP12.36□□□□□ -0.43
ATL1-202ENST00000441560 PARD3Q8TEW0 1356 aa12.36□□□□□ -0.43
ATL1-202ENST00000441560 BLMP54132 1417 aaPredicted RBP12.36□□□□□ -0.43
ATL1-202ENST00000441560 LETM1O95202 739 aaPredicted RBP12.36□□□□□ -0.43
ATL1-202ENST00000441560 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
ATL1-202ENST00000441560 CGNQ9P2M7 1197 aaKnown RBP12.36□□□□□ -0.43
ATL1-202ENST00000441560 CFTRP13569 1480 aa12.35□□□□□ -0.43
ATL1-202ENST00000441560 BCAR3O75815 825 aa12.35□□□□□ -0.43
ATL1-202ENST00000441560 HSCBQ8IWL3 235 aa12.35□□□□□ -0.43
ATL1-202ENST00000441560 GBP4Q96PP9 640 aa12.35□□□□□ -0.43
ATL1-202ENST00000441560 ZMYM4Q5VZL5 1548 aa12.34□□□□□ -0.43
ATL1-202ENST00000441560 ZNF500O60304 480 aaPredicted RBP12.34□□□□□ -0.43
ATL1-202ENST00000441560 GOLGA2Q08379 1002 aa12.34□□□□□ -0.43
ATL1-202ENST00000441560 SKOR2Q2VWA4 1001 aaPredicted RBP12.34□□□□□ -0.43
ATL1-202ENST00000441560 FGD5Q6ZNL6 1462 aa12.34□□□□□ -0.43
ATL1-202ENST00000441560 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
ATL1-202ENST00000441560 ZNF692Q9BU19 519 aaPredicted RBP12.34□□□□□ -0.43
ATL1-202ENST00000441560 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
ATL1-202ENST00000441560 NOL7Q9UMY1 257 aaKnown RBP12.34□□□□□ -0.43
ATL1-202ENST00000441560 ADAMTS8Q9UP79 889 aa12.34□□□□□ -0.43
ATL1-202ENST00000441560 GCC2Q8IWJ2 1684 aa12.33□□□□□ -0.43
ATL1-202ENST00000441560 ZBTB7CA1YPR0 619 aa12.33□□□□□ -0.44
ATL1-202ENST00000441560 PLEKHH2Q8IVE3 1493 aa12.33□□□□□ -0.44
ATL1-202ENST00000441560 KDM5CP41229 1560 aa12.33□□□□□ -0.44
ATL1-202ENST00000441560 THOC2Q8NI27 1593 aaKnown RBP12.33□□□□□ -0.44
ATL1-202ENST00000441560 NCBP3Q53F19 620 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms