RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ARHGEF12Q9NZN5 1544 aa16.12■□□□□ 0.17
LTBR-203ENST00000441074 ANKRD50Q9ULJ7 1429 aa16.11■□□□□ 0.17
LTBR-203ENST00000441074 FANCAO15360 1455 aa16.11■□□□□ 0.17
LTBR-203ENST00000441074 KIF15Q9NS87 1388 aa16.11■□□□□ 0.17
LTBR-203ENST00000441074 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
LTBR-203ENST00000441074 TEX14Q8IWB6 1497 aa16.1■□□□□ 0.17
LTBR-203ENST00000441074 RTL5Q5HYW3 569 aaPredicted RBP16.1■□□□□ 0.17
LTBR-203ENST00000441074 FAM9BQ8IZU0 186 aa16.1■□□□□ 0.17
LTBR-203ENST00000441074 PREX2Q70Z35 1606 aa16.09■□□□□ 0.17
LTBR-203ENST00000441074 ANO8Q9HCE9 1232 aaPredicted RBP16.09■□□□□ 0.17
LTBR-203ENST00000441074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.08■□□□□ 0.179e-9■■□□□ 11.5
LTBR-203ENST00000441074 MRS2Q9HD23 443 aa16.08■□□□□ 0.17
LTBR-203ENST00000441074 PKD2Q13563 968 aa16.08■□□□□ 0.16
LTBR-203ENST00000441074 ADGRL2O95490 1459 aa16.07■□□□□ 0.16
LTBR-203ENST00000441074 RPRD2Q5VT52 1461 aaKnown RBP16.07■□□□□ 0.16
LTBR-203ENST00000441074 CCDC141Q6ZP82 1450 aa16.07■□□□□ 0.16
LTBR-203ENST00000441074 TRAPPC8Q9Y2L5 1435 aa16.07■□□□□ 0.16
LTBR-203ENST00000441074 NUP155O75694 1391 aa16.07■□□□□ 0.16
LTBR-203ENST00000441074 ZBTB47Q9UFB7 747 aaPredicted RBP16.07■□□□□ 0.16
LTBR-203ENST00000441074 ARAP3Q8WWN8 1544 aa16.07■□□□□ 0.16
LTBR-203ENST00000441074 POLR1AO95602 1720 aaPredicted RBP16.06■□□□□ 0.16
LTBR-203ENST00000441074 SMG6Q86US8 1419 aaKnown RBP16.05■□□□□ 0.16
LTBR-203ENST00000441074 NEO1Q92859 1461 aa16.05■□□□□ 0.16
LTBR-203ENST00000441074 CCDC7Q96M83 1385 aa16.05■□□□□ 0.16
LTBR-203ENST00000441074 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
LTBR-203ENST00000441074 PZPP20742 1482 aa16.04■□□□□ 0.16
LTBR-203ENST00000441074 RAPGEF3O95398 923 aa16.03■□□□□ 0.16
LTBR-203ENST00000441074 L3MBTL2Q969R5 705 aa16.03■□□□□ 0.16
LTBR-203ENST00000441074 CROCC2H7BZ55 1655 aa16.03■□□□□ 0.16
LTBR-203ENST00000441074 ANKRD30BQ9BXX2 1392 aa16.03■□□□□ 0.16
LTBR-203ENST00000441074 ADGRL1O94910 1474 aa16.03■□□□□ 0.16
LTBR-203ENST00000441074 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
LTBR-203ENST00000441074 RSPH4AQ5TD94 716 aa16.02■□□□□ 0.16
LTBR-203ENST00000441074 COL17A1Q9UMD9 1497 aaPredicted RBP16.02■□□□□ 0.16
LTBR-203ENST00000441074 CCDC136Q96JN2 1154 aa16.02■□□□□ 0.15
LTBR-203ENST00000441074 SHANK2Q9UPX8 1470 aa16.02■□□□□ 0.15
LTBR-203ENST00000441074 CFAP74Q9C0B2 1584 aa16.01■□□□□ 0.15
LTBR-203ENST00000441074 C11orf95C9JLR9 678 aaPredicted RBP16.01■□□□□ 0.15
LTBR-203ENST00000441074 ARHGEF5Q12774 1597 aa16■□□□□ 0.15
LTBR-203ENST00000441074 KIAA1107Q9UPP5 1409 aa16■□□□□ 0.15
LTBR-203ENST00000441074 NUDCQ9Y266 331 aa15.99■□□□□ 0.15
LTBR-203ENST00000441074 SALL2Q9Y467 1007 aaPredicted RBP15.99■□□□□ 0.15
LTBR-203ENST00000441074 SPAG9O60271 1321 aaKnown RBP15.98■□□□□ 0.15
LTBR-203ENST00000441074 ADGBQ8N7X0 1667 aa15.98■□□□□ 0.15
LTBR-203ENST00000441074 SPATA31E1Q6ZUB1 1445 aa15.98■□□□□ 0.15
LTBR-203ENST00000441074 PLEKHH2Q8IVE3 1493 aa15.98■□□□□ 0.15
LTBR-203ENST00000441074 ABCC1P33527 1531 aa15.98■□□□□ 0.15
LTBR-203ENST00000441074 ZNF326Q5BKZ1 582 aaKnown RBP15.95■□□□□ 0.14
LTBR-203ENST00000441074 IL27Q8NEV9 243 aa15.95■□□□□ 0.14
LTBR-203ENST00000441074 USP35Q9P2H5 1018 aa15.95■□□□□ 0.14
LTBR-203ENST00000441074 NBPF8Q3BBV2 869 aa15.94■□□□□ 0.14
LTBR-203ENST00000441074 POGZQ7Z3K3 1410 aa15.94■□□□□ 0.14
LTBR-203ENST00000441074 KIF7Q2M1P5 1343 aa15.92■□□□□ 0.14
LTBR-203ENST00000441074 ZNF518AQ6AHZ1 1483 aa15.92■□□□□ 0.14
LTBR-203ENST00000441074 RICTORQ6R327 1708 aa15.91■□□□□ 0.14
LTBR-203ENST00000441074 FRMPD1Q5SYB0 1578 aa15.9■□□□□ 0.14
LTBR-203ENST00000441074 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
LTBR-203ENST00000441074 ARID4BQ4LE39 1312 aaPredicted RBP15.88■□□□□ 0.13
LTBR-203ENST00000441074 RGL3Q3MIN7 710 aa15.88■□□□□ 0.13
LTBR-203ENST00000441074 WASHC2CQ9Y4E1 1318 aa15.88■□□□□ 0.13
LTBR-203ENST00000441074 KIF3BO15066 747 aa15.88■□□□□ 0.13
LTBR-203ENST00000441074 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
LTBR-203ENST00000441074 FAM135AQ9P2D6 1515 aa15.87■□□□□ 0.13
LTBR-203ENST00000441074 KDM5CP41229 1560 aa15.86■□□□□ 0.13
LTBR-203ENST00000441074 NEFMP07197 916 aa15.85■□□□□ 0.13
LTBR-203ENST00000441074 DHX29Q7Z478 1369 aaKnown RBP15.85■□□□□ 0.13
LTBR-203ENST00000441074 YEATS2Q9ULM3 1422 aa15.85■□□□□ 0.13
LTBR-203ENST00000441074 MAST1Q9Y2H9 1570 aa15.84■□□□□ 0.13
LTBR-203ENST00000441074 PPM1GO15355 546 aaPredicted RBP15.84■□□□□ 0.13
LTBR-203ENST00000441074 RTN4Q9NQC3 1192 aaKnown RBP15.84■□□□□ 0.13
LTBR-203ENST00000441074 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
LTBR-203ENST00000441074 MLH3Q9UHC1 1453 aa15.83■□□□□ 0.13
LTBR-203ENST00000441074 DCAF11Q8TEB1 546 aa15.83■□□□□ 0.12
LTBR-203ENST00000441074 ZMYM4Q5VZL5 1548 aa15.83■□□□□ 0.12
LTBR-203ENST00000441074 DUOX2Q9NRD8 1548 aa15.83■□□□□ 0.12
LTBR-203ENST00000441074 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.12
LTBR-203ENST00000441074 HECW2Q9P2P5 1572 aa15.82■□□□□ 0.12
LTBR-203ENST00000441074 USP47Q96K76 1375 aa15.82■□□□□ 0.12
LTBR-203ENST00000441074 MS4A1P11836 297 aa15.82■□□□□ 0.12
LTBR-203ENST00000441074 UHRF1BP1Q6BDS2 1440 aa15.81■□□□□ 0.12
LTBR-203ENST00000441074 MAGI2Q86UL8 1455 aa15.81■□□□□ 0.12
LTBR-203ENST00000441074 ATP7AQ04656 1500 aa15.81■□□□□ 0.12
LTBR-203ENST00000441074 PLXNC1O60486 1568 aa15.81■□□□□ 0.12
LTBR-203ENST00000441074 KIDINS220Q9ULH0 1771 aa15.81■□□□□ 0.12
LTBR-203ENST00000441074 PDE4AP27815 886 aa15.81■□□□□ 0.12
LTBR-203ENST00000441074 PLA2R1Q13018 1463 aa15.81■□□□□ 0.12
LTBR-203ENST00000441074 NPM2Q86SE8 214 aaKnown RBP15.8■□□□□ 0.12
LTBR-203ENST00000441074 LAS1LQ9Y4W2 734 aaKnown RBP15.8■□□□□ 0.12
LTBR-203ENST00000441074 RTEL1-TNFRSF6BF6WH68 1400 aa15.8■□□□□ 0.12
LTBR-203ENST00000441074 ERBINQ96RT1 1412 aa15.8■□□□□ 0.12
LTBR-203ENST00000441074 RALGAPBQ86X10 1494 aa15.8■□□□□ 0.12
LTBR-203ENST00000441074 BACH2Q9BYV9 841 aa15.8■□□□□ 0.12
LTBR-203ENST00000441074 BCORL1Q5H9F3 1711 aa15.8■□□□□ 0.12
LTBR-203ENST00000441074 KDM5DQ9BY66 1539 aa15.79■□□□□ 0.12
LTBR-203ENST00000441074 PNISRQ8TF01 805 aaKnown RBP15.79■□□□□ 0.12
LTBR-203ENST00000441074 GGT6Q6P531 493 aa15.79■□□□□ 0.12
LTBR-203ENST00000441074 INO80Q9ULG1 1556 aaPredicted RBP15.79■□□□□ 0.12
LTBR-203ENST00000441074 RRP1P56182 461 aaKnown RBP15.77■□□□□ 0.11
LTBR-203ENST00000441074 ABCA6Q8N139 1617 aa15.77■□□□□ 0.11
LTBR-203ENST00000441074 ATP10AO60312 1499 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms