RNA–Protein interactions for RNA: ENST00000440787.5

ARPC4-204, Transcript of actin related protein 2/3 complex subunit 4, humanhuman

TSL 3

Gene ARPC4, Length 910 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARPC4-204ENST00000440787 KIF15Q9NS87 1388 aa30.37■■■□□ 2.45
ARPC4-204ENST00000440787 PPARGC1BQ86YN6 1023 aaKnown RBP30.35■■■□□ 2.45
ARPC4-204ENST00000440787 KDM5DQ9BY66 1539 aa30.35■■■□□ 2.45
ARPC4-204ENST00000440787 NPATQ14207 1427 aa30.32■■■□□ 2.44
ARPC4-204ENST00000440787 UHRF1BP1Q6BDS2 1440 aa30.32■■■□□ 2.44
ARPC4-204ENST00000440787 ANKRD30AQ9BXX3 1397 aa30.3■■■□□ 2.44
ARPC4-204ENST00000440787 ERBINQ96RT1 1412 aa30.3■■■□□ 2.44
ARPC4-204ENST00000440787 RRP7BPQ9NSQ0 103 aa30.29■■■□□ 2.44
ARPC4-204ENST00000440787 ADGRL2O95490 1459 aa30.29■■■□□ 2.44
ARPC4-204ENST00000440787 HSPA2P54652 639 aa30.28■■■□□ 2.44
ARPC4-204ENST00000440787 CHIC2Q9UKJ5 165 aa30.28■■■□□ 2.44
ARPC4-204ENST00000440787 MROH1Q8NDA8 1641 aa30.28■■■□□ 2.44
ARPC4-204ENST00000440787 PTPRKQ15262 1439 aa30.27■■■□□ 2.44
ARPC4-204ENST00000440787 ZC3H13Q5T200 1668 aaKnown RBP30.27■■■□□ 2.44
ARPC4-204ENST00000440787 NCOA1Q15788 1441 aa30.26■■■□□ 2.43
ARPC4-204ENST00000440787 WASHC2CQ9Y4E1 1318 aa30.25■■■□□ 2.43
ARPC4-204ENST00000440787 ABCC3O15438 1527 aa30.22■■■□□ 2.43
ARPC4-204ENST00000440787 MYO3AQ8NEV4 1616 aa30.22■■■□□ 2.43
ARPC4-204ENST00000440787 PRDM15P57071 1507 aaPredicted RBP30.22■■■□□ 2.43
ARPC4-204ENST00000440787 PZPP20742 1482 aa30.2■■■□□ 2.43
ARPC4-204ENST00000440787 DEPDC5O75140 1603 aa30.2■■■□□ 2.43
ARPC4-204ENST00000440787 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.19■■■□□ 2.424e-9■■□□□ 14.4
ARPC4-204ENST00000440787 CEP152O94986 1710 aa30.19■■■□□ 2.42
ARPC4-204ENST00000440787 ZNF142P52746 1687 aaPredicted RBP30.17■■■□□ 2.42
ARPC4-204ENST00000440787 CAMSAP1Q5T5Y3 1602 aa30.14■■■□□ 2.42
ARPC4-204ENST00000440787 RRBP1Q9P2E9 1410 aaKnown RBP30.13■■■□□ 2.41
ARPC4-204ENST00000440787 CEP170BQ9Y4F5 1589 aaPredicted RBP30.12■■■□□ 2.41
ARPC4-204ENST00000440787 ROCK1Q13464 1354 aa30.1■■■□□ 2.41
ARPC4-204ENST00000440787 ANKRD50Q9ULJ7 1429 aa30.1■■■□□ 2.41
ARPC4-204ENST00000440787 FBXO31Q5XUX0 539 aaPredicted RBP30.09■■■□□ 2.41
ARPC4-204ENST00000440787 STRCQ7RTU9 1775 aa30.09■■■□□ 2.41
ARPC4-204ENST00000440787 TNRQ92752 1358 aa30.09■■■□□ 2.41
ARPC4-204ENST00000440787 KANK1Q14678 1352 aa30.07■■■□□ 2.4
ARPC4-204ENST00000440787 VWDEQ8N2E2 1590 aa30.06■■■□□ 2.4
ARPC4-204ENST00000440787 ITGAEP38570 1179 aa30.05■■■□□ 2.4
ARPC4-204ENST00000440787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.05■■■□□ 2.43e-10■■□□□ 11.4
ARPC4-204ENST00000440787 A2ML1A8K2U0 1454 aa30.05■■■□□ 2.4
ARPC4-204ENST00000440787 SPATA31D1Q6ZQQ2 1576 aa30.04■■■□□ 2.4
ARPC4-204ENST00000440787 ERVK-7P63135 1459 aa30.02■■■□□ 2.4
ARPC4-204ENST00000440787 LMTK2Q8IWU2 1503 aa30.01■■■□□ 2.4
ARPC4-204ENST00000440787 ARHGAP31Q2M1Z3 1444 aa30.01■■■□□ 2.39
ARPC4-204ENST00000440787 NLRP1Q9C000 1473 aa29.99■■■□□ 2.39
ARPC4-204ENST00000440787 CFAP65Q6ZU64 1925 aaKnown RBP29.98■■■□□ 2.39
ARPC4-204ENST00000440787 UNC13BO14795 1591 aa29.98■■■□□ 2.39
ARPC4-204ENST00000440787 PLA2R1Q13018 1463 aa29.97■■■□□ 2.39
ARPC4-204ENST00000440787 EFCAB6Q5THR3 1501 aa29.95■■■□□ 2.38
ARPC4-204ENST00000440787 DMRT2Q9Y5R5 561 aa29.94■■■□□ 2.38
ARPC4-204ENST00000440787 PTPRTO14522 1441 aa29.9■■■□□ 2.38
ARPC4-204ENST00000440787 UGGT1Q9NYU2 1555 aa29.9■■■□□ 2.38
ARPC4-204ENST00000440787 TET3O43151 1660 aa29.89■■■□□ 2.38
ARPC4-204ENST00000440787 GCC2Q8IWJ2 1684 aa29.86■■■□□ 2.37
ARPC4-204ENST00000440787 IQGAP3Q86VI3 1631 aa29.85■■■□□ 2.37
ARPC4-204ENST00000440787 POLR1AO95602 1720 aaPredicted RBP29.85■■■□□ 2.37
ARPC4-204ENST00000440787 PKD2Q13563 968 aa29.84■■■□□ 2.37
ARPC4-204ENST00000440787 NCKAP5LQ9HCH0 1330 aa29.84■■■□□ 2.37
ARPC4-204ENST00000440787 RPRD2Q5VT52 1461 aaKnown RBP29.82■■■□□ 2.36
ARPC4-204ENST00000440787 UBR1Q8IWV7 1749 aa29.82■■■□□ 2.36
ARPC4-204ENST00000440787 THEMISQ8N1K5 641 aaPredicted RBP29.81■■■□□ 2.36
ARPC4-204ENST00000440787 SYNMO15061 1565 aa29.8■■■□□ 2.36
ARPC4-204ENST00000440787 NAIPQ13075 1403 aa29.79■■■□□ 2.36
ARPC4-204ENST00000440787 NOS1P29475 1434 aa29.79■■■□□ 2.36
ARPC4-204ENST00000440787 PIK3C2BO00750 1634 aa29.78■■■□□ 2.36
ARPC4-204ENST00000440787 NEURL4Q96JN8 1562 aa29.77■■■□□ 2.36
ARPC4-204ENST00000440787 NUP155O75694 1391 aa29.77■■■□□ 2.36
ARPC4-204ENST00000440787 E9PCH4 1651 aa29.76■■■□□ 2.36
ARPC4-204ENST00000440787 HFM1A2PYH4 1435 aa29.76■■■□□ 2.35
ARPC4-204ENST00000440787 KDM5AP29375 1690 aaKnown RBP29.73■■■□□ 2.35
ARPC4-204ENST00000440787 ANKLE2Q86XL3 938 aa29.71■■■□□ 2.35
ARPC4-204ENST00000440787 SLIT1O75093 1534 aa29.67■■■□□ 2.34
ARPC4-204ENST00000440787 MED14O60244 1454 aa29.67■■■□□ 2.34
ARPC4-204ENST00000440787 ADGRB3O60242 1522 aa29.66■■■□□ 2.34
ARPC4-204ENST00000440787 IDI1Q13907 227 aa29.66■■■□□ 2.34
ARPC4-204ENST00000440787 ARHGAP23Q9P227 1491 aa29.66■■■□□ 2.34
ARPC4-204ENST00000440787 LTBP4Q8N2S1 1624 aa29.65■■■□□ 2.34
ARPC4-204ENST00000440787 CERKQ8TCT0 537 aa29.65■■■□□ 2.34
ARPC4-204ENST00000440787 SLC52A1Q9NWF4 448 aa29.65■■■□□ 2.34
ARPC4-204ENST00000440787 IQGAP1P46940 1657 aa29.64■■■□□ 2.34
ARPC4-204ENST00000440787 NPHP4O75161 1426 aaPredicted RBP29.63■■■□□ 2.33
ARPC4-204ENST00000440787 ILDR1Q86SU0 546 aaPredicted RBP29.63■■■□□ 2.33
ARPC4-204ENST00000440787 STAG3Q9UJ98 1225 aa29.63■■■□□ 2.33
ARPC4-204ENST00000440787 SCAF11Q99590 1463 aaKnown RBP29.62■■■□□ 2.33
ARPC4-204ENST00000440787 TMEM2Q9UHN6 1383 aa29.59■■■□□ 2.33
ARPC4-204ENST00000440787 SPHKAPQ2M3C7 1700 aa29.58■■■□□ 2.33
ARPC4-204ENST00000440787 ZNF335Q9H4Z2 1342 aaPredicted RBP29.58■■■□□ 2.33
ARPC4-204ENST00000440787 FBXO41Q8TF61 875 aa29.57■■■□□ 2.32
ARPC4-204ENST00000440787 MYO5BQ9ULV0 1848 aa29.57■■■□□ 2.32
ARPC4-204ENST00000440787 TMEM131LA2VDJ0 1609 aa29.55■■■□□ 2.32
ARPC4-204ENST00000440787 LTKP29376 864 aa29.54■■■□□ 2.32
ARPC4-204ENST00000440787 TXNDC2Q86VQ3 553 aa29.54■■■□□ 2.32
ARPC4-204ENST00000440787 EID1Q9Y6B2 187 aa29.54■■■□□ 2.32
ARPC4-204ENST00000440787 TRIM52Q96A61 297 aa29.52■■■□□ 2.32
ARPC4-204ENST00000440787 IQSEC2Q5JU85 1478 aa29.49■■■□□ 2.31
ARPC4-204ENST00000440787 TRPM2O94759 1503 aa29.45■■■□□ 2.31
ARPC4-204ENST00000440787 CPS1P31327 1500 aa29.45■■■□□ 2.31
ARPC4-204ENST00000440787 ZFYVE9O95405 1425 aa29.45■■■□□ 2.3
ARPC4-204ENST00000440787 CHGAP10645 457 aaKnown RBP29.43■■■□□ 2.3
ARPC4-204ENST00000440787 SLC4A1APQ9BWU0 796 aaKnown RBP29.42■■■□□ 2.3
ARPC4-204ENST00000440787 RIMS2Q9UQ26 1411 aa29.42■■■□□ 2.3
ARPC4-204ENST00000440787 CLTCL1P53675 1640 aa29.42■■■□□ 2.3
ARPC4-204ENST00000440787 SETD5Q9C0A6 1442 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms