RNA–Protein interactions for RNA: ENST00000440284.6

ACSM3-202, Transcript of acyl-CoA synthetase medium chain family member 3, humanhuman

TSL 1 (best) BASIC

Gene ACSM3, Length 1,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACSM3-202ENST00000440284 IQGAP3Q86VI3 1631 aa14.28□□□□□ -0.12
ACSM3-202ENST00000440284 MAGI2Q86UL8 1455 aa14.27□□□□□ -0.12
ACSM3-202ENST00000440284 TRAPPC8Q9Y2L5 1435 aa14.27□□□□□ -0.12
ACSM3-202ENST00000440284 WASHC2AQ641Q2 1341 aa14.27□□□□□ -0.12
ACSM3-202ENST00000440284 RNF39Q9H2S5 420 aa14.27□□□□□ -0.12
ACSM3-202ENST00000440284 SPATA31E1Q6ZUB1 1445 aa14.27□□□□□ -0.13
ACSM3-202ENST00000440284 ASXL2Q76L83 1435 aa14.27□□□□□ -0.13
ACSM3-202ENST00000440284 CCDC7Q96M83 1385 aa14.26□□□□□ -0.13
ACSM3-202ENST00000440284 ARID4BQ4LE39 1312 aaPredicted RBP14.26□□□□□ -0.13
ACSM3-202ENST00000440284 CCDC144AA2RUR9 1427 aa14.26□□□□□ -0.13
ACSM3-202ENST00000440284 FANCAO15360 1455 aa14.25□□□□□ -0.13
ACSM3-202ENST00000440284 RALGAPBQ86X10 1494 aa14.25□□□□□ -0.13
ACSM3-202ENST00000440284 CNTLNQ9NXG0 1405 aa14.25□□□□□ -0.13
ACSM3-202ENST00000440284 MAPK8IP2Q13387 824 aaPredicted RBP14.25□□□□□ -0.13
ACSM3-202ENST00000440284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.24□□□□□ -0.131e-11■□□□□ 8.2
ACSM3-202ENST00000440284 ATP10AO60312 1499 aa14.24□□□□□ -0.13
ACSM3-202ENST00000440284 POLR1AO95602 1720 aaPredicted RBP14.21□□□□□ -0.13
ACSM3-202ENST00000440284 ZFYVE16Q7Z3T8 1539 aa14.21□□□□□ -0.13
ACSM3-202ENST00000440284 USP47Q96K76 1375 aa14.21□□□□□ -0.13
ACSM3-202ENST00000440284 ADGRL1O94910 1474 aa14.21□□□□□ -0.13
ACSM3-202ENST00000440284 ZNF326Q5BKZ1 582 aaKnown RBP14.2□□□□□ -0.14
ACSM3-202ENST00000440284 DCAF11Q8TEB1 546 aa14.2□□□□□ -0.14
ACSM3-202ENST00000440284 KANK1Q14678 1352 aa14.2□□□□□ -0.14
ACSM3-202ENST00000440284 SCAPERQ9BY12 1400 aa14.2□□□□□ -0.14
ACSM3-202ENST00000440284 AFAP1Q8N556 730 aa14.2□□□□□ -0.14
ACSM3-202ENST00000440284 CFAP74Q9C0B2 1584 aa14.19□□□□□ -0.14
ACSM3-202ENST00000440284 ATP7AQ04656 1500 aa14.19□□□□□ -0.14
ACSM3-202ENST00000440284 CARD11Q9BXL7 1154 aa14.19□□□□□ -0.14
ACSM3-202ENST00000440284 KIF7Q2M1P5 1343 aa14.18□□□□□ -0.14
ACSM3-202ENST00000440284 STAC3Q96MF2 364 aa14.18□□□□□ -0.14
ACSM3-202ENST00000440284 ROCK2O75116 1388 aaKnown RBP14.18□□□□□ -0.14
ACSM3-202ENST00000440284 INO80Q9ULG1 1556 aaPredicted RBP14.18□□□□□ -0.14
ACSM3-202ENST00000440284 KDM5CP41229 1560 aa14.17□□□□□ -0.14
ACSM3-202ENST00000440284 PLA2R1Q13018 1463 aa14.17□□□□□ -0.14
ACSM3-202ENST00000440284 DHX29Q7Z478 1369 aaKnown RBP14.17□□□□□ -0.14
ACSM3-202ENST00000440284 C11orf95C9JLR9 678 aaPredicted RBP14.16□□□□□ -0.14
ACSM3-202ENST00000440284 NPM3O75607 178 aaKnown RBP14.16□□□□□ -0.14
ACSM3-202ENST00000440284 MYT1LQ9UL68 1186 aa14.16□□□□□ -0.14
ACSM3-202ENST00000440284 KDM2AQ9Y2K7 1162 aa14.16□□□□□ -0.14
ACSM3-202ENST00000440284 EIF2AK4Q9P2K8 1649 aaKnown RBP14.16□□□□□ -0.14
ACSM3-202ENST00000440284 CD109Q6YHK3 1445 aa14.15□□□□□ -0.14
ACSM3-202ENST00000440284 ZNF518AQ6AHZ1 1483 aa14.14□□□□□ -0.15
ACSM3-202ENST00000440284 DEPDC5O75140 1603 aa14.14□□□□□ -0.15
ACSM3-202ENST00000440284 PRAG1Q86YV5 1406 aa14.14□□□□□ -0.15
ACSM3-202ENST00000440284 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
ACSM3-202ENST00000440284 GPRASP1Q5JY77 1395 aa14.12□□□□□ -0.15
ACSM3-202ENST00000440284 PTPRTO14522 1441 aa14.12□□□□□ -0.15
ACSM3-202ENST00000440284 TET3O43151 1660 aa14.12□□□□□ -0.15
ACSM3-202ENST00000440284 A2MP01023 1474 aa14.11□□□□□ -0.15
ACSM3-202ENST00000440284 LAMC1P11047 1609 aa14.11□□□□□ -0.15
ACSM3-202ENST00000440284 VWDEQ8N2E2 1590 aa14.1□□□□□ -0.15
ACSM3-202ENST00000440284 TRPM2O94759 1503 aa14.1□□□□□ -0.15
ACSM3-202ENST00000440284 TRPM1Q7Z4N2 1603 aa14.1□□□□□ -0.15
ACSM3-202ENST00000440284 KIF3BO15066 747 aa14.1□□□□□ -0.15
ACSM3-202ENST00000440284 RGL3Q3MIN7 710 aa14.1□□□□□ -0.15
ACSM3-202ENST00000440284 NEO1Q92859 1461 aa14.09□□□□□ -0.15
ACSM3-202ENST00000440284 MLH3Q9UHC1 1453 aa14.09□□□□□ -0.15
ACSM3-202ENST00000440284 E9PCH4 1651 aa14.08□□□□□ -0.15
ACSM3-202ENST00000440284 PRDM15P57071 1507 aaPredicted RBP14.08□□□□□ -0.16
ACSM3-202ENST00000440284 NEURL4Q96JN8 1562 aa14.08□□□□□ -0.16
ACSM3-202ENST00000440284 ST20-MTHFSA0A0A6YYL1 179 aa14.07□□□□□ -0.16
ACSM3-202ENST00000440284 BCORL1Q5H9F3 1711 aa14.07□□□□□ -0.16
ACSM3-202ENST00000440284 POGZQ7Z3K3 1410 aa14.07□□□□□ -0.16
ACSM3-202ENST00000440284 C1QBPQ07021 282 aaKnown RBP14.06□□□□□ -0.16
ACSM3-202ENST00000440284 KIDINS220Q9ULH0 1771 aa14.06□□□□□ -0.16
ACSM3-202ENST00000440284 SPHKAPQ2M3C7 1700 aa14.06□□□□□ -0.16
ACSM3-202ENST00000440284 LMTK2Q8IWU2 1503 aa14.06□□□□□ -0.16
ACSM3-202ENST00000440284 KTN1Q86UP2 1357 aaKnown RBP14.05□□□□□ -0.16
ACSM3-202ENST00000440284 POLR3GLQ9BT43 218 aa14.04□□□□□ -0.16
ACSM3-202ENST00000440284 CEP152O94986 1710 aa14.03□□□□□ -0.16
ACSM3-202ENST00000440284 RNF17Q9BXT8 1623 aaKnown RBP14.03□□□□□ -0.16
ACSM3-202ENST00000440284 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.16
ACSM3-202ENST00000440284 MRS2Q9HD23 443 aa14.02□□□□□ -0.16
ACSM3-202ENST00000440284 PELP1Q8IZL8 1130 aaKnown RBP14.01□□□□□ -0.17
ACSM3-202ENST00000440284 MROH1Q8NDA8 1641 aa14.01□□□□□ -0.17
ACSM3-202ENST00000440284 SLC24A1O60721 1099 aa14□□□□□ -0.17
ACSM3-202ENST00000440284 HNRNPUQ00839 825 aaKnown RBP eCLIP14□□□□□ -0.17
ACSM3-202ENST00000440284 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
ACSM3-202ENST00000440284 GLI2P10070 1586 aa14□□□□□ -0.17
ACSM3-202ENST00000440284 EFCAB6Q5THR3 1501 aa14□□□□□ -0.17
ACSM3-202ENST00000440284 TMF1P82094 1093 aa14□□□□□ -0.17
ACSM3-202ENST00000440284 CLTCL1P53675 1640 aa13.99□□□□□ -0.17
ACSM3-202ENST00000440284 NEFLP07196 543 aa13.99□□□□□ -0.17
ACSM3-202ENST00000440284 RALBP1Q15311 655 aa13.99□□□□□ -0.17
ACSM3-202ENST00000440284 DCAF8L1A6NGE4 600 aa13.98□□□□□ -0.17
ACSM3-202ENST00000440284 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
ACSM3-202ENST00000440284 WASHC2CQ9Y4E1 1318 aa13.97□□□□□ -0.17
ACSM3-202ENST00000440284 MADDQ8WXG6 1647 aa13.97□□□□□ -0.17
ACSM3-202ENST00000440284 CDCA8Q53HL2 280 aa13.97□□□□□ -0.17
ACSM3-202ENST00000440284 COL17A1Q9UMD9 1497 aaPredicted RBP13.97□□□□□ -0.17
ACSM3-202ENST00000440284 KIAA1210Q9ULL0 1709 aa13.96□□□□□ -0.17
ACSM3-202ENST00000440284 MAP3K4Q9Y6R4 1608 aa13.96□□□□□ -0.17
ACSM3-202ENST00000440284 MYOM2P54296 1465 aa13.96□□□□□ -0.18
ACSM3-202ENST00000440284 KIF1BO60333 1816 aa13.95□□□□□ -0.18
ACSM3-202ENST00000440284 EIF3AQ14152 1382 aaKnown RBP13.95□□□□□ -0.18
ACSM3-202ENST00000440284 CYB5RLQ6IPT4 315 aa13.95□□□□□ -0.18
ACSM3-202ENST00000440284 TESK2Q96S53 571 aa13.95□□□□□ -0.18
ACSM3-202ENST00000440284 FRMPD1Q5SYB0 1578 aa13.94□□□□□ -0.18
ACSM3-202ENST00000440284 SCAF11Q99590 1463 aaKnown RBP13.94□□□□□ -0.18
ACSM3-202ENST00000440284 ZBTB22O15209 634 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms