RNA–Protein interactions for RNA: ENST00000440167.1

SMPD4P2-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 2, humanhuman

BASIC

Gene SMPD4P2, Length 1,634 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P2-201ENST00000440167 MLH3Q9UHC1 1453 aa16.67■□□□□ 0.26
SMPD4P2-201ENST00000440167 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.66■□□□□ 0.26
SMPD4P2-201ENST00000440167 PKD2Q13563 968 aa16.65■□□□□ 0.26
SMPD4P2-201ENST00000440167 DIP2CQ9Y2E4 1556 aa16.65■□□□□ 0.26
SMPD4P2-201ENST00000440167 ANKRD30BQ9BXX2 1392 aa16.65■□□□□ 0.26
SMPD4P2-201ENST00000440167 DHX29Q7Z478 1369 aaKnown RBP16.62■□□□□ 0.25
SMPD4P2-201ENST00000440167 A2MP01023 1474 aa16.62■□□□□ 0.25
SMPD4P2-201ENST00000440167 MROH1Q8NDA8 1641 aa16.62■□□□□ 0.25
SMPD4P2-201ENST00000440167 TONSLQ96HA7 1378 aa16.62■□□□□ 0.25
SMPD4P2-201ENST00000440167 CEP152O94986 1710 aa16.6■□□□□ 0.25
SMPD4P2-201ENST00000440167 ZMYM4Q5VZL5 1548 aa16.6■□□□□ 0.25
SMPD4P2-201ENST00000440167 E9PCH4 1651 aa16.6■□□□□ 0.25
SMPD4P2-201ENST00000440167 RNF17Q9BXT8 1623 aaKnown RBP16.6■□□□□ 0.25
SMPD4P2-201ENST00000440167 BCORL1Q5H9F3 1711 aa16.59■□□□□ 0.25
SMPD4P2-201ENST00000440167 PRDM15P57071 1507 aaPredicted RBP16.59■□□□□ 0.25
SMPD4P2-201ENST00000440167 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
SMPD4P2-201ENST00000440167 RPRD2Q5VT52 1461 aaKnown RBP16.58■□□□□ 0.25
SMPD4P2-201ENST00000440167 YEATS2Q9ULM3 1422 aa16.58■□□□□ 0.25
SMPD4P2-201ENST00000440167 KIF3BO15066 747 aa16.58■□□□□ 0.24
SMPD4P2-201ENST00000440167 VWDEQ8N2E2 1590 aa16.58■□□□□ 0.24
SMPD4P2-201ENST00000440167 TET3O43151 1660 aa16.57■□□□□ 0.24
SMPD4P2-201ENST00000440167 TIMELESSQ9UNS1 1208 aa16.57■□□□□ 0.24
SMPD4P2-201ENST00000440167 COL17A1Q9UMD9 1497 aaPredicted RBP16.55■□□□□ 0.24
SMPD4P2-201ENST00000440167 SPHKAPQ2M3C7 1700 aa16.54■□□□□ 0.24
SMPD4P2-201ENST00000440167 PPP1R15AO75807 674 aaPredicted RBP16.53■□□□□ 0.24
SMPD4P2-201ENST00000440167 KANK1Q14678 1352 aa16.52■□□□□ 0.24
SMPD4P2-201ENST00000440167 SIGLEC1Q9BZZ2 1709 aa16.51■□□□□ 0.23
SMPD4P2-201ENST00000440167 CFAP65Q6ZU64 1925 aaKnown RBP16.51■□□□□ 0.23
SMPD4P2-201ENST00000440167 PLA2R1Q13018 1463 aa16.49■□□□□ 0.23
SMPD4P2-201ENST00000440167 ZNF316A6NFI3 1004 aaPredicted RBP16.49■□□□□ 0.23
SMPD4P2-201ENST00000440167 EFCAB6Q5THR3 1501 aa16.49■□□□□ 0.23
SMPD4P2-201ENST00000440167 ARHGEF40Q8TER5 1519 aa16.49■□□□□ 0.23
SMPD4P2-201ENST00000440167 TRHP20396 242 aaPredicted RBP16.48■□□□□ 0.23
SMPD4P2-201ENST00000440167 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
SMPD4P2-201ENST00000440167 ATP10AO60312 1499 aa16.47■□□□□ 0.23
SMPD4P2-201ENST00000440167 GGT6Q6P531 493 aa16.47■□□□□ 0.23
SMPD4P2-201ENST00000440167 CAMSAP1Q5T5Y3 1602 aa16.47■□□□□ 0.23
SMPD4P2-201ENST00000440167 LMTK2Q8IWU2 1503 aa16.47■□□□□ 0.23
SMPD4P2-201ENST00000440167 REREQ9P2R6 1566 aa16.46■□□□□ 0.23
SMPD4P2-201ENST00000440167 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.23
SMPD4P2-201ENST00000440167 ZC3H13Q5T200 1668 aaKnown RBP16.45■□□□□ 0.22
SMPD4P2-201ENST00000440167 ABCC3O15438 1527 aa16.45■□□□□ 0.22
SMPD4P2-201ENST00000440167 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
SMPD4P2-201ENST00000440167 TRPM2O94759 1503 aa16.45■□□□□ 0.22
SMPD4P2-201ENST00000440167 PTPRTO14522 1441 aa16.41■□□□□ 0.22
SMPD4P2-201ENST00000440167 KIF1BO60333 1816 aa16.41■□□□□ 0.22
SMPD4P2-201ENST00000440167 AGLP35573 1532 aa16.4■□□□□ 0.22
SMPD4P2-201ENST00000440167 UGGT1Q9NYU2 1555 aa16.39■□□□□ 0.21
SMPD4P2-201ENST00000440167 CLTCQ00610 1675 aaKnown RBP16.39■□□□□ 0.21
SMPD4P2-201ENST00000440167 WASHC2CQ9Y4E1 1318 aa16.38■□□□□ 0.21
SMPD4P2-201ENST00000440167 NBPF8Q3BBV2 869 aa16.38■□□□□ 0.21
SMPD4P2-201ENST00000440167 NPATQ14207 1427 aa16.37■□□□□ 0.21
SMPD4P2-201ENST00000440167 MROH2AA6NES4 1674 aa16.37■□□□□ 0.21
SMPD4P2-201ENST00000440167 ZNF326Q5BKZ1 582 aaKnown RBP16.35■□□□□ 0.21
SMPD4P2-201ENST00000440167 PREX1Q8TCU6 1659 aa16.35■□□□□ 0.21
SMPD4P2-201ENST00000440167 RGL3Q3MIN7 710 aa16.34■□□□□ 0.21
SMPD4P2-201ENST00000440167 DCAF11Q8TEB1 546 aa16.34■□□□□ 0.21
SMPD4P2-201ENST00000440167 KDM2AQ9Y2K7 1162 aa16.34■□□□□ 0.21
SMPD4P2-201ENST00000440167 HIRIP3Q9BW71 556 aaPredicted RBP16.33■□□□□ 0.2
SMPD4P2-201ENST00000440167 SYNMO15061 1565 aa16.32■□□□□ 0.2
SMPD4P2-201ENST00000440167 SPATA31E1Q6ZUB1 1445 aa16.32■□□□□ 0.2
SMPD4P2-201ENST00000440167 MLECQ14165 292 aa16.32■□□□□ 0.2
SMPD4P2-201ENST00000440167 UHRF1BP1Q6BDS2 1440 aa16.32■□□□□ 0.2
SMPD4P2-201ENST00000440167 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
SMPD4P2-201ENST00000440167 IFT172Q9UG01 1749 aa16.31■□□□□ 0.2
SMPD4P2-201ENST00000440167 DIEXFQ68CQ4 756 aaKnown RBP16.3■□□□□ 0.2
SMPD4P2-201ENST00000440167 PIK3C2BO00750 1634 aa16.3■□□□□ 0.2
SMPD4P2-201ENST00000440167 ARHGAP31Q2M1Z3 1444 aa16.29■□□□□ 0.2
SMPD4P2-201ENST00000440167 CNTLNQ9NXG0 1405 aa16.29■□□□□ 0.2
SMPD4P2-201ENST00000440167 MYO5BQ9ULV0 1848 aa16.29■□□□□ 0.2
SMPD4P2-201ENST00000440167 NEURL4Q96JN8 1562 aa16.28■□□□□ 0.2
SMPD4P2-201ENST00000440167 RALGAPBQ86X10 1494 aa16.28■□□□□ 0.2
SMPD4P2-201ENST00000440167 NOS1P29475 1434 aa16.27■□□□□ 0.2
SMPD4P2-201ENST00000440167 PRAG1Q86YV5 1406 aa16.27■□□□□ 0.2
SMPD4P2-201ENST00000440167 MADDQ8WXG6 1647 aa16.27■□□□□ 0.2
SMPD4P2-201ENST00000440167 ADGRB3O60242 1522 aa16.27■□□□□ 0.19
SMPD4P2-201ENST00000440167 ARID4BQ4LE39 1312 aaPredicted RBP16.26■□□□□ 0.19
SMPD4P2-201ENST00000440167 PPLO60437 1756 aa16.25■□□□□ 0.19
SMPD4P2-201ENST00000440167 HSPA5P11021 654 aaKnown RBP16.25■□□□□ 0.19
SMPD4P2-201ENST00000440167 POLR1AO95602 1720 aaPredicted RBP16.23■□□□□ 0.19
SMPD4P2-201ENST00000440167 FER1L4A9Z1Z3 1794 aa16.23■□□□□ 0.19
SMPD4P2-201ENST00000440167 ERVK-7P63135 1459 aa16.22■□□□□ 0.19
SMPD4P2-201ENST00000440167 CHGAP10645 457 aaKnown RBP16.22■□□□□ 0.19
SMPD4P2-201ENST00000440167 EIF4G2P78344 907 aaKnown RBP eCLIP16.22■□□□□ 0.19
SMPD4P2-201ENST00000440167 PPP6R1Q9UPN7 881 aa16.22■□□□□ 0.19
SMPD4P2-201ENST00000440167 FBXO31Q5XUX0 539 aaPredicted RBP16.21■□□□□ 0.19
SMPD4P2-201ENST00000440167 LAMC1P11047 1609 aa16.2■□□□□ 0.18
SMPD4P2-201ENST00000440167 SPATA31D1Q6ZQQ2 1576 aa16.2■□□□□ 0.18
SMPD4P2-201ENST00000440167 ROCK2O75116 1388 aaKnown RBP16.19■□□□□ 0.18
SMPD4P2-201ENST00000440167 TMEM131LA2VDJ0 1609 aa16.18■□□□□ 0.18
SMPD4P2-201ENST00000440167 USP47Q96K76 1375 aa16.18■□□□□ 0.18
SMPD4P2-201ENST00000440167 ESF1Q9H501 851 aaKnown RBP16.18■□□□□ 0.18
SMPD4P2-201ENST00000440167 MYOM2P54296 1465 aa16.18■□□□□ 0.18
SMPD4P2-201ENST00000440167 KIAA1210Q9ULL0 1709 aa16.17■□□□□ 0.18
SMPD4P2-201ENST00000440167 CARD11Q9BXL7 1154 aa16.17■□□□□ 0.18
SMPD4P2-201ENST00000440167 C3P01024 1663 aa16.16■□□□□ 0.18
SMPD4P2-201ENST00000440167 IDI1Q13907 227 aa16.16■□□□□ 0.18
SMPD4P2-201ENST00000440167 NBPF1Q3BBV0 1214 aa16.16■□□□□ 0.18
SMPD4P2-201ENST00000440167 ZMYM3Q14202 1370 aa16.15■□□□□ 0.18
SMPD4P2-201ENST00000440167 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms