RNA–Protein interactions for RNA: ENST00000440081.2

TNRC18-207, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 3

Gene TNRC18, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-207ENST00000440081 POLR1AO95602 1720 aaPredicted RBP17.87■□□□□ 0.45
TNRC18-207ENST00000440081 KIF3BO15066 747 aa17.87■□□□□ 0.45
TNRC18-207ENST00000440081 TNRQ92752 1358 aa17.87■□□□□ 0.45
TNRC18-207ENST00000440081 CAMSAP2Q08AD1 1489 aa17.87■□□□□ 0.45
TNRC18-207ENST00000440081 KDM5DQ9BY66 1539 aa17.87■□□□□ 0.45
TNRC18-207ENST00000440081 FAM135AQ9P2D6 1515 aa17.87■□□□□ 0.45
TNRC18-207ENST00000440081 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
TNRC18-207ENST00000440081 PZPP20742 1482 aa17.86■□□□□ 0.45
TNRC18-207ENST00000440081 NCOA2Q15596 1464 aa17.86■□□□□ 0.45
TNRC18-207ENST00000440081 NEURL4Q96JN8 1562 aa17.85■□□□□ 0.45
TNRC18-207ENST00000440081 RSPH4AQ5TD94 716 aa17.83■□□□□ 0.44
TNRC18-207ENST00000440081 WASHC2CQ9Y4E1 1318 aa17.82■□□□□ 0.44
TNRC18-207ENST00000440081 CPS1P31327 1500 aa17.82■□□□□ 0.44
TNRC18-207ENST00000440081 ARHGEF5Q12774 1597 aa17.81■□□□□ 0.44
TNRC18-207ENST00000440081 SHANK2Q9UPX8 1470 aa17.8■□□□□ 0.44
TNRC18-207ENST00000440081 NLRP1Q9C000 1473 aa17.79■□□□□ 0.44
TNRC18-207ENST00000440081 MIA2Q96PC5 1412 aa17.79■□□□□ 0.44
TNRC18-207ENST00000440081 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.79■□□□□ 0.44
TNRC18-207ENST00000440081 ANKLE2Q86XL3 938 aa17.78■□□□□ 0.44
TNRC18-207ENST00000440081 THEMISQ8N1K5 641 aaPredicted RBP17.77■□□□□ 0.44
TNRC18-207ENST00000440081 VWDEQ8N2E2 1590 aa17.77■□□□□ 0.44
TNRC18-207ENST00000440081 UGGT1Q9NYU2 1555 aa17.77■□□□□ 0.44
TNRC18-207ENST00000440081 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
TNRC18-207ENST00000440081 TOM1O60784 492 aa17.76■□□□□ 0.43
TNRC18-207ENST00000440081 TSPY4P0CV99 314 aa17.76■□□□□ 0.43
TNRC18-207ENST00000440081 TSPY10P0CW01 314 aa17.76■□□□□ 0.43
TNRC18-207ENST00000440081 PIP4K2BP78356 416 aa17.76■□□□□ 0.43
TNRC18-207ENST00000440081 DEPDC5O75140 1603 aa17.76■□□□□ 0.43
TNRC18-207ENST00000440081 HSPA1LP34931 641 aa17.75■□□□□ 0.43
TNRC18-207ENST00000440081 RNF17Q9BXT8 1623 aaKnown RBP17.75■□□□□ 0.43
TNRC18-207ENST00000440081 MED14O60244 1454 aa17.75■□□□□ 0.43
TNRC18-207ENST00000440081 NPHP4O75161 1426 aaPredicted RBP17.74■□□□□ 0.43
TNRC18-207ENST00000440081 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
TNRC18-207ENST00000440081 ZC3H13Q5T200 1668 aaKnown RBP17.73■□□□□ 0.43
TNRC18-207ENST00000440081 ABCC3O15438 1527 aa17.72■□□□□ 0.43
TNRC18-207ENST00000440081 MED1Q15648 1581 aaPredicted RBP17.72■□□□□ 0.43
TNRC18-207ENST00000440081 IQGAP1P46940 1657 aa17.71■□□□□ 0.43
TNRC18-207ENST00000440081 LRRC9Q6ZRR7 1453 aa17.71■□□□□ 0.43
TNRC18-207ENST00000440081 EIF2AK4Q9P2K8 1649 aaKnown RBP17.7■□□□□ 0.42
TNRC18-207ENST00000440081 ERVK-7P63135 1459 aa17.69■□□□□ 0.42
TNRC18-207ENST00000440081 ALKQ9UM73 1620 aa17.69■□□□□ 0.42
TNRC18-207ENST00000440081 VPS8Q8N3P4 1428 aa17.68■□□□□ 0.42
TNRC18-207ENST00000440081 MROH1Q8NDA8 1641 aa17.68■□□□□ 0.42
TNRC18-207ENST00000440081 STRCP1A6NGW2 1772 aa17.66■□□□□ 0.42
TNRC18-207ENST00000440081 CEP152O94986 1710 aa17.66■□□□□ 0.42
TNRC18-207ENST00000440081 LRRC7Q96NW7 1537 aa17.64■□□□□ 0.41
TNRC18-207ENST00000440081 SYNMO15061 1565 aa17.64■□□□□ 0.41
TNRC18-207ENST00000440081 CFAP65Q6ZU64 1925 aaKnown RBP17.64■□□□□ 0.41
TNRC18-207ENST00000440081 UBR1Q8IWV7 1749 aa17.64■□□□□ 0.41
TNRC18-207ENST00000440081 MYOM3Q5VTT5 1437 aa17.64■□□□□ 0.41
TNRC18-207ENST00000440081 MAP3K1Q13233 1512 aa17.63■□□□□ 0.41
TNRC18-207ENST00000440081 DUOX2Q9NRD8 1548 aa17.62■□□□□ 0.41
TNRC18-207ENST00000440081 KANK4Q5T7N3 995 aaPredicted RBP17.62■□□□□ 0.41
TNRC18-207ENST00000440081 SCAF11Q99590 1463 aaKnown RBP17.6■□□□□ 0.41
TNRC18-207ENST00000440081 PRDM15P57071 1507 aaPredicted RBP17.58■□□□□ 0.41
TNRC18-207ENST00000440081 ARHGAP23Q9P227 1491 aa17.58■□□□□ 0.41
TNRC18-207ENST00000440081 SLIT1O75093 1534 aa17.57■□□□□ 0.4
TNRC18-207ENST00000440081 ARHGAP31Q2M1Z3 1444 aa17.57■□□□□ 0.4
TNRC18-207ENST00000440081 KIF15Q9NS87 1388 aa17.57■□□□□ 0.4
TNRC18-207ENST00000440081 PHF23Q9BUL5 403 aaPredicted RBP17.57■□□□□ 0.4
TNRC18-207ENST00000440081 CROCC2H7BZ55 1655 aa17.56■□□□□ 0.4
TNRC18-207ENST00000440081 LOC105371045A0A1W2PR82 267 aa17.56■□□□□ 0.4
TNRC18-207ENST00000440081 LTKP29376 864 aa17.56■□□□□ 0.4
TNRC18-207ENST00000440081 ERBINQ96RT1 1412 aa17.55■□□□□ 0.4
TNRC18-207ENST00000440081 TXNDC2Q86VQ3 553 aa17.55■□□□□ 0.4
TNRC18-207ENST00000440081 SENP3Q9H4L4 574 aaPredicted RBP17.55■□□□□ 0.4
TNRC18-207ENST00000440081 ABCC5O15440 1437 aa17.55■□□□□ 0.4
TNRC18-207ENST00000440081 RRP7BPQ9NSQ0 103 aa17.53■□□□□ 0.4
TNRC18-207ENST00000440081 XIRP1Q702N8 1843 aaKnown RBP17.52■□□□□ 0.4
TNRC18-207ENST00000440081 PIK3C2BO00750 1634 aa17.52■□□□□ 0.4
TNRC18-207ENST00000440081 PTPN23Q9H3S7 1636 aa17.52■□□□□ 0.4
TNRC18-207ENST00000440081 EID1Q9Y6B2 187 aa17.51■□□□□ 0.39
TNRC18-207ENST00000440081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.5■□□□□ 0.395e-10■□□□□ 10.3
TNRC18-207ENST00000440081 TMEM2Q9UHN6 1383 aa17.5■□□□□ 0.39
TNRC18-207ENST00000440081 DAPK1P53355 1430 aa17.49■□□□□ 0.39
TNRC18-207ENST00000440081 KANK1Q14678 1352 aa17.49■□□□□ 0.39
TNRC18-207ENST00000440081 KDM5AP29375 1690 aaKnown RBP17.48■□□□□ 0.39
TNRC18-207ENST00000440081 STAG3Q9UJ98 1225 aa17.47■□□□□ 0.39
TNRC18-207ENST00000440081 EFCAB6Q5THR3 1501 aa17.47■□□□□ 0.39
TNRC18-207ENST00000440081 LMTK2Q8IWU2 1503 aa17.47■□□□□ 0.39
TNRC18-207ENST00000440081 FGD6Q6ZV73 1430 aa17.45■□□□□ 0.38
TNRC18-207ENST00000440081 IDI1Q13907 227 aa17.44■□□□□ 0.38
TNRC18-207ENST00000440081 ANKRD30AQ9BXX3 1397 aa17.43■□□□□ 0.38
TNRC18-207ENST00000440081 APLP2Q06481 763 aa17.43■□□□□ 0.38
TNRC18-207ENST00000440081 FAM135BQ49AJ0 1406 aa17.43■□□□□ 0.38
TNRC18-207ENST00000440081 TMEM94Q12767 1356 aa17.42■□□□□ 0.38
TNRC18-207ENST00000440081 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
TNRC18-207ENST00000440081 CHIC2Q9UKJ5 165 aa17.42■□□□□ 0.38
TNRC18-207ENST00000440081 TET3O43151 1660 aa17.42■□□□□ 0.38
TNRC18-207ENST00000440081 NOS1P29475 1434 aa17.41■□□□□ 0.38
TNRC18-207ENST00000440081 KCNA6P17658 529 aa17.41■□□□□ 0.38
TNRC18-207ENST00000440081 ADGRB3O60242 1522 aa17.41■□□□□ 0.38
TNRC18-207ENST00000440081 SLC26A8Q96RN1 970 aa17.4■□□□□ 0.38
TNRC18-207ENST00000440081 ROBO1Q9Y6N7 1651 aa17.38■□□□□ 0.37
TNRC18-207ENST00000440081 NWD1Q149M9 1564 aa17.37■□□□□ 0.37
TNRC18-207ENST00000440081 PROSER2Q86WR7 435 aaPredicted RBP17.37■□□□□ 0.37
TNRC18-207ENST00000440081 ADGRL2O95490 1459 aa17.37■□□□□ 0.37
TNRC18-207ENST00000440081 NKTRP30414 1462 aaKnown RBP17.37■□□□□ 0.37
TNRC18-207ENST00000440081 RBM33Q96EV2 1170 aaKnown RBP17.36■□□□□ 0.37
TNRC18-207ENST00000440081 SLC52A1Q9NWF4 448 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms