RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 KDM2AQ9Y2K7 1162 aa14.43□□□□□ -0.1
CPNE1-218ENST00000439806 RTEL1-TNFRSF6BF6WH68 1400 aa14.42□□□□□ -0.1
CPNE1-218ENST00000439806 ZFYVE16Q7Z3T8 1539 aa14.42□□□□□ -0.1
CPNE1-218ENST00000439806 SUPT16HQ9Y5B9 1047 aaKnown RBP14.42□□□□□ -0.1
CPNE1-218ENST00000439806 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
CPNE1-218ENST00000439806 EIF2AK4Q9P2K8 1649 aaKnown RBP14.41□□□□□ -0.1
CPNE1-218ENST00000439806 DCAF11Q8TEB1 546 aa14.41□□□□□ -0.1
CPNE1-218ENST00000439806 CARD11Q9BXL7 1154 aa14.41□□□□□ -0.1
CPNE1-218ENST00000439806 ARID4BQ4LE39 1312 aaPredicted RBP14.41□□□□□ -0.1
CPNE1-218ENST00000439806 INO80Q9ULG1 1556 aaPredicted RBP14.4□□□□□ -0.1
CPNE1-218ENST00000439806 FANCAO15360 1455 aa14.4□□□□□ -0.1
CPNE1-218ENST00000439806 ATP7AQ04656 1500 aa14.4□□□□□ -0.1
CPNE1-218ENST00000439806 POLR3GLQ9BT43 218 aa14.39□□□□□ -0.11
CPNE1-218ENST00000439806 LAMC1P11047 1609 aa14.39□□□□□ -0.11
CPNE1-218ENST00000439806 ROCK2O75116 1388 aaKnown RBP14.38□□□□□ -0.11
CPNE1-218ENST00000439806 DEPDC5O75140 1603 aa14.38□□□□□ -0.11
CPNE1-218ENST00000439806 PRKRIP1Q9H875 184 aaPredicted RBP14.38□□□□□ -0.11
CPNE1-218ENST00000439806 E9PCH4 1651 aa14.38□□□□□ -0.11
CPNE1-218ENST00000439806 SPHKAPQ2M3C7 1700 aa14.38□□□□□ -0.11
CPNE1-218ENST00000439806 NEFLP07196 543 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 ASXL2Q76L83 1435 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 PRAG1Q86YV5 1406 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 CFAP74Q9C0B2 1584 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 CEP152O94986 1710 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 ATP10AO60312 1499 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 A2MP01023 1474 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 PLA2R1Q13018 1463 aa14.37□□□□□ -0.11
CPNE1-218ENST00000439806 TET3O43151 1660 aa14.36□□□□□ -0.11
CPNE1-218ENST00000439806 ADGRL1O94910 1474 aa14.36□□□□□ -0.11
CPNE1-218ENST00000439806 HNRNPUQ00839 825 aaKnown RBP eCLIP14.35□□□□□ -0.11
CPNE1-218ENST00000439806 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
CPNE1-218ENST00000439806 MRS2Q9HD23 443 aa14.34□□□□□ -0.11
CPNE1-218ENST00000439806 MYT1LQ9UL68 1186 aa14.34□□□□□ -0.11
CPNE1-218ENST00000439806 KANK1Q14678 1352 aa14.34□□□□□ -0.11
CPNE1-218ENST00000439806 RGL3Q3MIN7 710 aa14.33□□□□□ -0.12
CPNE1-218ENST00000439806 OSCARQ8IYS5 282 aa14.33□□□□□ -0.12
CPNE1-218ENST00000439806 SCAPERQ9BY12 1400 aa14.32□□□□□ -0.12
CPNE1-218ENST00000439806 TRPM2O94759 1503 aa14.32□□□□□ -0.12
CPNE1-218ENST00000439806 AFAP1Q8N556 730 aa14.32□□□□□ -0.12
CPNE1-218ENST00000439806 PRDM15P57071 1507 aaPredicted RBP14.31□□□□□ -0.12
CPNE1-218ENST00000439806 RNF17Q9BXT8 1623 aaKnown RBP14.31□□□□□ -0.12
CPNE1-218ENST00000439806 DHX29Q7Z478 1369 aaKnown RBP14.31□□□□□ -0.12
CPNE1-218ENST00000439806 ST20-MTHFSA0A0A6YYL1 179 aa14.3□□□□□ -0.12
CPNE1-218ENST00000439806 CLTCL1P53675 1640 aa14.3□□□□□ -0.12
CPNE1-218ENST00000439806 KIDINS220Q9ULH0 1771 aa14.29□□□□□ -0.12
CPNE1-218ENST00000439806 FKBP8Q14318 412 aa14.29□□□□□ -0.12
CPNE1-218ENST00000439806 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
CPNE1-218ENST00000439806 GPRASP1Q5JY77 1395 aa14.29□□□□□ -0.12
CPNE1-218ENST00000439806 VWDEQ8N2E2 1590 aa14.29□□□□□ -0.12
CPNE1-218ENST00000439806 FAM9BQ8IZU0 186 aa14.28□□□□□ -0.12
CPNE1-218ENST00000439806 MADDQ8WXG6 1647 aa14.27□□□□□ -0.12
CPNE1-218ENST00000439806 KIF1BO60333 1816 aa14.27□□□□□ -0.13
CPNE1-218ENST00000439806 MROH1Q8NDA8 1641 aa14.26□□□□□ -0.13
CPNE1-218ENST00000439806 ZNF518AQ6AHZ1 1483 aa14.25□□□□□ -0.13
CPNE1-218ENST00000439806 PTPRTO14522 1441 aa14.24□□□□□ -0.13
CPNE1-218ENST00000439806 IQGAP1P46940 1657 aa14.24□□□□□ -0.13
CPNE1-218ENST00000439806 KIF3BO15066 747 aa14.24□□□□□ -0.13
CPNE1-218ENST00000439806 BCANQ96GW7 911 aa14.24□□□□□ -0.13
CPNE1-218ENST00000439806 COL17A1Q9UMD9 1497 aaPredicted RBP14.24□□□□□ -0.13
CPNE1-218ENST00000439806 HECW2Q9P2P5 1572 aa14.23□□□□□ -0.13
CPNE1-218ENST00000439806 CNGB1Q14028 1251 aaPredicted RBP14.23□□□□□ -0.13
CPNE1-218ENST00000439806 NBPF1Q3BBV0 1214 aa14.23□□□□□ -0.13
CPNE1-218ENST00000439806 CD109Q6YHK3 1445 aa14.23□□□□□ -0.13
CPNE1-218ENST00000439806 KTN1Q86UP2 1357 aaKnown RBP14.22□□□□□ -0.13
CPNE1-218ENST00000439806 KIAA1210Q9ULL0 1709 aa14.22□□□□□ -0.13
CPNE1-218ENST00000439806 MYT1Q01538 1121 aa14.22□□□□□ -0.13
CPNE1-218ENST00000439806 NEURL4Q96JN8 1562 aa14.22□□□□□ -0.13
CPNE1-218ENST00000439806 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
CPNE1-218ENST00000439806 ZBED9Q6R2W3 1325 aa14.21□□□□□ -0.13
CPNE1-218ENST00000439806 STAC3Q96MF2 364 aa14.21□□□□□ -0.13
CPNE1-218ENST00000439806 PPRC1Q5VV67 1664 aaKnown RBP14.2□□□□□ -0.14
CPNE1-218ENST00000439806 POGZQ7Z3K3 1410 aa14.2□□□□□ -0.14
CPNE1-218ENST00000439806 RALBP1Q15311 655 aa14.19□□□□□ -0.14
CPNE1-218ENST00000439806 LMTK2Q8IWU2 1503 aa14.19□□□□□ -0.14
CPNE1-218ENST00000439806 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
CPNE1-218ENST00000439806 TMF1P82094 1093 aa14.18□□□□□ -0.14
CPNE1-218ENST00000439806 MYBBP1AQ9BQG0 1328 aaKnown RBP14.17□□□□□ -0.14
CPNE1-218ENST00000439806 MROH2AA6NES4 1674 aa14.17□□□□□ -0.14
CPNE1-218ENST00000439806 MLH3Q9UHC1 1453 aa14.17□□□□□ -0.14
CPNE1-218ENST00000439806 ABCA6Q8N139 1617 aa14.16□□□□□ -0.14
CPNE1-218ENST00000439806 TMC1Q8TDI8 760 aa14.16□□□□□ -0.14
CPNE1-218ENST00000439806 BRD4O60885 1362 aaPredicted RBP14.16□□□□□ -0.14
CPNE1-218ENST00000439806 DISP3Q9P2K9 1392 aa14.16□□□□□ -0.14
CPNE1-218ENST00000439806 NEO1Q92859 1461 aa14.16□□□□□ -0.14
CPNE1-218ENST00000439806 MAP3K4Q9Y6R4 1608 aa14.15□□□□□ -0.14
CPNE1-218ENST00000439806 SCAF11Q99590 1463 aaKnown RBP14.15□□□□□ -0.14
CPNE1-218ENST00000439806 MYOM2P54296 1465 aa14.14□□□□□ -0.15
CPNE1-218ENST00000439806 TESK2Q96S53 571 aa14.14□□□□□ -0.15
CPNE1-218ENST00000439806 FRMPD1Q5SYB0 1578 aa14.13□□□□□ -0.15
CPNE1-218ENST00000439806 CFAP65Q6ZU64 1925 aaKnown RBP14.13□□□□□ -0.15
CPNE1-218ENST00000439806 UGGT1Q9NYU2 1555 aa14.13□□□□□ -0.15
CPNE1-218ENST00000439806 EIF3AQ14152 1382 aaKnown RBP14.13□□□□□ -0.15
CPNE1-218ENST00000439806 KDM5AP29375 1690 aaKnown RBP14.12□□□□□ -0.15
CPNE1-218ENST00000439806 CAMSAP1Q5T5Y3 1602 aa14.12□□□□□ -0.15
CPNE1-218ENST00000439806 PARD3Q8TEW0 1356 aa14.11□□□□□ -0.15
CPNE1-218ENST00000439806 RICTORQ6R327 1708 aa14.11□□□□□ -0.15
CPNE1-218ENST00000439806 SYNMO15061 1565 aa14.1□□□□□ -0.15
CPNE1-218ENST00000439806 PPLO60437 1756 aa14.1□□□□□ -0.15
CPNE1-218ENST00000439806 CDCA8Q53HL2 280 aa14.1□□□□□ -0.15
CPNE1-218ENST00000439806 PNISRQ8TF01 805 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms