RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 RSPH4AQ5TD94 716 aa18.2■□□□□ 0.5
IRF1-204ENST00000439555 ZNF644Q9H582 1327 aaPredicted RBP18.2■□□□□ 0.5
IRF1-204ENST00000439555 GGT6Q6P531 493 aa18.19■□□□□ 0.5
IRF1-204ENST00000439555 MBD5Q9P267 1494 aa18.19■□□□□ 0.5
IRF1-204ENST00000439555 TIAM1Q13009 1591 aa18.18■□□□□ 0.5
IRF1-204ENST00000439555 SHANK2Q9UPX8 1470 aa18.18■□□□□ 0.5
IRF1-204ENST00000439555 NCOA2Q15596 1464 aa18.17■□□□□ 0.5
IRF1-204ENST00000439555 RTEL1-TNFRSF6BF6WH68 1400 aa18.16■□□□□ 0.5
IRF1-204ENST00000439555 MAP3K1Q13233 1512 aa18.15■□□□□ 0.5
IRF1-204ENST00000439555 NEURL4Q96JN8 1562 aa18.15■□□□□ 0.5
IRF1-204ENST00000439555 PIP4K2BP78356 416 aa18.14■□□□□ 0.49
IRF1-204ENST00000439555 SCAF1Q9H7N4 1312 aaKnown RBP18.13■□□□□ 0.49
IRF1-204ENST00000439555 LRRC9Q6ZRR7 1453 aa18.13■□□□□ 0.49
IRF1-204ENST00000439555 FAM135AQ9P2D6 1515 aa18.13■□□□□ 0.49
IRF1-204ENST00000439555 ANKLE2Q86XL3 938 aa18.11■□□□□ 0.49
IRF1-204ENST00000439555 DEPDC5O75140 1603 aa18.11■□□□□ 0.49
IRF1-204ENST00000439555 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
IRF1-204ENST00000439555 MED14O60244 1454 aa18.1■□□□□ 0.49
IRF1-204ENST00000439555 THEMISQ8N1K5 641 aaPredicted RBP18.1■□□□□ 0.49
IRF1-204ENST00000439555 DHX29Q7Z478 1369 aaKnown RBP18.09■□□□□ 0.49
IRF1-204ENST00000439555 PHF23Q9BUL5 403 aaPredicted RBP18.09■□□□□ 0.49
IRF1-204ENST00000439555 ALKQ9UM73 1620 aa18.09■□□□□ 0.49
IRF1-204ENST00000439555 CCDC141Q6ZP82 1450 aa18.08■□□□□ 0.49
IRF1-204ENST00000439555 TNRQ92752 1358 aa18.08■□□□□ 0.49
IRF1-204ENST00000439555 KANK4Q5T7N3 995 aaPredicted RBP18.08■□□□□ 0.48
IRF1-204ENST00000439555 PZPP20742 1482 aa18.07■□□□□ 0.48
IRF1-204ENST00000439555 TSPY4P0CV99 314 aa18.07■□□□□ 0.48
IRF1-204ENST00000439555 TSPY10P0CW01 314 aa18.07■□□□□ 0.48
IRF1-204ENST00000439555 CAMSAP2Q08AD1 1489 aa18.07■□□□□ 0.48
IRF1-204ENST00000439555 NLRP1Q9C000 1473 aa18.05■□□□□ 0.48
IRF1-204ENST00000439555 MIA2Q96PC5 1412 aa18.05■□□□□ 0.48
IRF1-204ENST00000439555 FBXO31Q5XUX0 539 aaPredicted RBP18.04■□□□□ 0.48
IRF1-204ENST00000439555 IQGAP1P46940 1657 aa18.03■□□□□ 0.48
IRF1-204ENST00000439555 APLP2Q06481 763 aa18.03■□□□□ 0.48
IRF1-204ENST00000439555 STRCP1A6NGW2 1772 aa18.03■□□□□ 0.48
IRF1-204ENST00000439555 KDM5DQ9BY66 1539 aa18.03■□□□□ 0.48
IRF1-204ENST00000439555 NPHP4O75161 1426 aaPredicted RBP18.02■□□□□ 0.48
IRF1-204ENST00000439555 UGGT1Q9NYU2 1555 aa18.02■□□□□ 0.48
IRF1-204ENST00000439555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.47
IRF1-204ENST00000439555 ARHGEF5Q12774 1597 aa18.01■□□□□ 0.47
IRF1-204ENST00000439555 MYOM3Q5VTT5 1437 aa18■□□□□ 0.47
IRF1-204ENST00000439555 KIF3BO15066 747 aa18■□□□□ 0.47
IRF1-204ENST00000439555 SYNMO15061 1565 aa18■□□□□ 0.47
IRF1-204ENST00000439555 WASHC2CQ9Y4E1 1318 aa17.99■□□□□ 0.47
IRF1-204ENST00000439555 RNF17Q9BXT8 1623 aaKnown RBP17.99■□□□□ 0.47
IRF1-204ENST00000439555 LRRC7Q96NW7 1537 aa17.98■□□□□ 0.47
IRF1-204ENST00000439555 ZC3H13Q5T200 1668 aaKnown RBP17.94■□□□□ 0.46
IRF1-204ENST00000439555 RGS17Q9UGC6 210 aaPredicted RBP17.94■□□□□ 0.46
IRF1-204ENST00000439555 XIRP1Q702N8 1843 aaKnown RBP17.93■□□□□ 0.46
IRF1-204ENST00000439555 MAST1Q9Y2H9 1570 aa17.92■□□□□ 0.46
IRF1-204ENST00000439555 CFAP65Q6ZU64 1925 aaKnown RBP17.92■□□□□ 0.46
IRF1-204ENST00000439555 UBR1Q8IWV7 1749 aa17.89■□□□□ 0.46
IRF1-204ENST00000439555 ABCC5O15440 1437 aa17.86■□□□□ 0.45
IRF1-204ENST00000439555 FAM135BQ49AJ0 1406 aa17.86■□□□□ 0.45
IRF1-204ENST00000439555 FGD6Q6ZV73 1430 aa17.86■□□□□ 0.45
IRF1-204ENST00000439555 EIF2AK4Q9P2K8 1649 aaKnown RBP17.84■□□□□ 0.45
IRF1-204ENST00000439555 ABCC3O15438 1527 aa17.83■□□□□ 0.45
IRF1-204ENST00000439555 DUOX2Q9NRD8 1548 aa17.83■□□□□ 0.45
IRF1-204ENST00000439555 SLIT1O75093 1534 aa17.82■□□□□ 0.44
IRF1-204ENST00000439555 ERVK-7P63135 1459 aa17.82■□□□□ 0.44
IRF1-204ENST00000439555 SCAF11Q99590 1463 aaKnown RBP17.82■□□□□ 0.44
IRF1-204ENST00000439555 ARHGAP23Q9P227 1491 aa17.82■□□□□ 0.44
IRF1-204ENST00000439555 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
IRF1-204ENST00000439555 DAPK1P53355 1430 aa17.81■□□□□ 0.44
IRF1-204ENST00000439555 PTPN23Q9H3S7 1636 aa17.8■□□□□ 0.44
IRF1-204ENST00000439555 RRP7BPQ9NSQ0 103 aa17.8■□□□□ 0.44
IRF1-204ENST00000439555 ERBINQ96RT1 1412 aa17.8■□□□□ 0.44
IRF1-204ENST00000439555 POTEAQ6S8J7 498 aa17.79■□□□□ 0.44
IRF1-204ENST00000439555 SENP3Q9H4L4 574 aaPredicted RBP17.79■□□□□ 0.44
IRF1-204ENST00000439555 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
IRF1-204ENST00000439555 CEP152O94986 1710 aa17.78■□□□□ 0.44
IRF1-204ENST00000439555 LTKP29376 864 aa17.78■□□□□ 0.44
IRF1-204ENST00000439555 TXNDC2Q86VQ3 553 aa17.78■□□□□ 0.44
IRF1-204ENST00000439555 KDM5AP29375 1690 aaKnown RBP17.77■□□□□ 0.44
IRF1-204ENST00000439555 MROH1Q8NDA8 1641 aa17.76■□□□□ 0.43
IRF1-204ENST00000439555 EID1Q9Y6B2 187 aa17.76■□□□□ 0.43
IRF1-204ENST00000439555 ARHGAP31Q2M1Z3 1444 aa17.75■□□□□ 0.43
IRF1-204ENST00000439555 ROBO1Q9Y6N7 1651 aa17.74■□□□□ 0.43
IRF1-204ENST00000439555 CHIC2Q9UKJ5 165 aa17.72■□□□□ 0.43
IRF1-204ENST00000439555 KANK1Q14678 1352 aa17.71■□□□□ 0.43
IRF1-204ENST00000439555 KCNA6P17658 529 aa17.71■□□□□ 0.43
IRF1-204ENST00000439555 FAM50AQ14320 339 aaKnown RBP17.71■□□□□ 0.43
IRF1-204ENST00000439555 PRDM15P57071 1507 aaPredicted RBP17.71■□□□□ 0.43
IRF1-204ENST00000439555 ADGRL2O95490 1459 aa17.7■□□□□ 0.42
IRF1-204ENST00000439555 CROCC2H7BZ55 1655 aa17.7■□□□□ 0.42
IRF1-204ENST00000439555 PIK3C2BO00750 1634 aa17.69■□□□□ 0.42
IRF1-204ENST00000439555 TMEM2Q9UHN6 1383 aa17.69■□□□□ 0.42
IRF1-204ENST00000439555 TET3O43151 1660 aa17.69■□□□□ 0.42
IRF1-204ENST00000439555 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.69■□□□□ 0.42
IRF1-204ENST00000439555 TMEM94Q12767 1356 aa17.68■□□□□ 0.42
IRF1-204ENST00000439555 PHLPP1O60346 1717 aa17.67■□□□□ 0.42
IRF1-204ENST00000439555 SETD1AO15047 1707 aaKnown RBP17.66■□□□□ 0.42
IRF1-204ENST00000439555 LMTK2Q8IWU2 1503 aa17.66■□□□□ 0.42
IRF1-204ENST00000439555 PROSER2Q86WR7 435 aaPredicted RBP17.65■□□□□ 0.42
IRF1-204ENST00000439555 JCADQ9P266 1359 aa17.64■□□□□ 0.41
IRF1-204ENST00000439555 ANKRD50Q9ULJ7 1429 aa17.64■□□□□ 0.41
IRF1-204ENST00000439555 NKTRP30414 1462 aaKnown RBP17.63■□□□□ 0.41
IRF1-204ENST00000439555 CHD2O14647 1828 aaKnown RBP17.63■□□□□ 0.41
IRF1-204ENST00000439555 EFCAB6Q5THR3 1501 aa17.63■□□□□ 0.41
IRF1-204ENST00000439555 NWD1Q149M9 1564 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms