RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 NPATQ14207 1427 aa38.12■■■■□ 3.69
RAPGEF1-206ENST00000438647 EIF2AK4Q9P2K8 1649 aaKnown RBP38.1■■■■□ 3.69
RAPGEF1-206ENST00000438647 HSPA2P54652 639 aa38.08■■■■□ 3.69
RAPGEF1-206ENST00000438647 KDM5DQ9BY66 1539 aa38.07■■■■□ 3.69
RAPGEF1-206ENST00000438647 ANKRD30AQ9BXX3 1397 aa38.06■■■■□ 3.68
RAPGEF1-206ENST00000438647 WASHC2CQ9Y4E1 1318 aa38.06■■■■□ 3.68
RAPGEF1-206ENST00000438647 RRP7BPQ9NSQ0 103 aa38.05■■■■□ 3.68
RAPGEF1-206ENST00000438647 RNF17Q9BXT8 1623 aaKnown RBP38.05■■■■□ 3.68
RAPGEF1-206ENST00000438647 PPARGC1BQ86YN6 1023 aaKnown RBP38.03■■■■□ 3.68
RAPGEF1-206ENST00000438647 ERBINQ96RT1 1412 aa38.03■■■■□ 3.68
RAPGEF1-206ENST00000438647 CHIC2Q9UKJ5 165 aa38.02■■■■□ 3.68
RAPGEF1-206ENST00000438647 PTPRKQ15262 1439 aa38■■■■□ 3.67
RAPGEF1-206ENST00000438647 NCOA1Q15788 1441 aa37.98■■■■□ 3.67
RAPGEF1-206ENST00000438647 ADGRL2O95490 1459 aa37.96■■■■□ 3.67
RAPGEF1-206ENST00000438647 PZPP20742 1482 aa37.92■■■■□ 3.66
RAPGEF1-206ENST00000438647 ZC3H13Q5T200 1668 aaKnown RBP37.92■■■■□ 3.66
RAPGEF1-206ENST00000438647 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.9■■■■□ 3.66
RAPGEF1-206ENST00000438647 ABCC3O15438 1527 aa37.89■■■■□ 3.66
RAPGEF1-206ENST00000438647 MROH1Q8NDA8 1641 aa37.89■■■■□ 3.66
RAPGEF1-206ENST00000438647 PRDM15P57071 1507 aaPredicted RBP37.86■■■■□ 3.65
RAPGEF1-206ENST00000438647 MYO3AQ8NEV4 1616 aa37.84■■■■□ 3.65
RAPGEF1-206ENST00000438647 FBXO31Q5XUX0 539 aaPredicted RBP37.81■■■■□ 3.64
RAPGEF1-206ENST00000438647 KANK1Q14678 1352 aa37.8■■■■□ 3.64
RAPGEF1-206ENST00000438647 TNRQ92752 1358 aa37.8■■■■□ 3.64
RAPGEF1-206ENST00000438647 DEPDC5O75140 1603 aa37.8■■■■□ 3.64
RAPGEF1-206ENST00000438647 ZNF142P52746 1687 aaPredicted RBP37.79■■■■□ 3.64
RAPGEF1-206ENST00000438647 CEP170BQ9Y4F5 1589 aaPredicted RBP37.78■■■■□ 3.64
RAPGEF1-206ENST00000438647 ROCK1Q13464 1354 aa37.78■■■■□ 3.64
RAPGEF1-206ENST00000438647 ANKRD50Q9ULJ7 1429 aa37.78■■■■□ 3.64
RAPGEF1-206ENST00000438647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP37.77■■■■□ 3.642e-10■■■□□ 18.1
RAPGEF1-206ENST00000438647 DMRT2Q9Y5R5 561 aa37.77■■■■□ 3.64
RAPGEF1-206ENST00000438647 CEP152O94986 1710 aa37.75■■■■□ 3.63
RAPGEF1-206ENST00000438647 RRBP1Q9P2E9 1410 aaKnown RBP37.75■■■■□ 3.63
RAPGEF1-206ENST00000438647 CAMSAP1Q5T5Y3 1602 aa37.73■■■■□ 3.63
RAPGEF1-206ENST00000438647 A2ML1A8K2U0 1454 aa37.73■■■■□ 3.63
RAPGEF1-206ENST00000438647 ITGAEP38570 1179 aa37.73■■■■□ 3.63
RAPGEF1-206ENST00000438647 STRCQ7RTU9 1775 aa37.71■■■■□ 3.63
RAPGEF1-206ENST00000438647 ARHGAP31Q2M1Z3 1444 aa37.7■■■■□ 3.62
RAPGEF1-206ENST00000438647 NLRP1Q9C000 1473 aa37.68■■■■□ 3.62
RAPGEF1-206ENST00000438647 SPATA31D1Q6ZQQ2 1576 aa37.68■■■■□ 3.62
RAPGEF1-206ENST00000438647 ERVK-7P63135 1459 aa37.66■■■■□ 3.62
RAPGEF1-206ENST00000438647 PLA2R1Q13018 1463 aa37.65■■■■□ 3.62
RAPGEF1-206ENST00000438647 VWDEQ8N2E2 1590 aa37.65■■■■□ 3.62
RAPGEF1-206ENST00000438647 LMTK2Q8IWU2 1503 aa37.65■■■■□ 3.62
RAPGEF1-206ENST00000438647 PTPRTO14522 1441 aa37.61■■■■□ 3.61
RAPGEF1-206ENST00000438647 PKD2Q13563 968 aa37.58■■■■□ 3.61
RAPGEF1-206ENST00000438647 THEMISQ8N1K5 641 aaPredicted RBP37.55■■■■□ 3.6
RAPGEF1-206ENST00000438647 UGGT1Q9NYU2 1555 aa37.54■■■■□ 3.6
RAPGEF1-206ENST00000438647 CFAP65Q6ZU64 1925 aaKnown RBP37.53■■■■□ 3.6
RAPGEF1-206ENST00000438647 EFCAB6Q5THR3 1501 aa37.52■■■■□ 3.6
RAPGEF1-206ENST00000438647 NCKAP5LQ9HCH0 1330 aa37.52■■■■□ 3.6
RAPGEF1-206ENST00000438647 UNC13BO14795 1591 aa37.51■■■■□ 3.6
RAPGEF1-206ENST00000438647 RPRD2Q5VT52 1461 aaKnown RBP37.45■■■■□ 3.59
RAPGEF1-206ENST00000438647 TET3O43151 1660 aa37.43■■■■□ 3.58
RAPGEF1-206ENST00000438647 ANKLE2Q86XL3 938 aa37.41■■■■□ 3.58
RAPGEF1-206ENST00000438647 NOS1P29475 1434 aa37.38■■■■□ 3.57
RAPGEF1-206ENST00000438647 NUP155O75694 1391 aa37.38■■■■□ 3.57
RAPGEF1-206ENST00000438647 IQGAP3Q86VI3 1631 aa37.37■■■■□ 3.57
RAPGEF1-206ENST00000438647 POLR1AO95602 1720 aaPredicted RBP37.37■■■■□ 3.57
RAPGEF1-206ENST00000438647 GCC2Q8IWJ2 1684 aa37.36■■■■□ 3.57
RAPGEF1-206ENST00000438647 NAIPQ13075 1403 aa37.36■■■■□ 3.57
RAPGEF1-206ENST00000438647 UBR1Q8IWV7 1749 aa37.35■■■■□ 3.57
RAPGEF1-206ENST00000438647 ILDR1Q86SU0 546 aaPredicted RBP37.34■■■■□ 3.57
RAPGEF1-206ENST00000438647 CERKQ8TCT0 537 aa37.34■■■■□ 3.57
RAPGEF1-206ENST00000438647 SLC52A1Q9NWF4 448 aa37.32■■■■□ 3.56
RAPGEF1-206ENST00000438647 STAG3Q9UJ98 1225 aa37.32■■■■□ 3.56
RAPGEF1-206ENST00000438647 SYNMO15061 1565 aa37.32■■■■□ 3.56
RAPGEF1-206ENST00000438647 HFM1A2PYH4 1435 aa37.31■■■■□ 3.56
RAPGEF1-206ENST00000438647 NEURL4Q96JN8 1562 aa37.3■■■■□ 3.56
RAPGEF1-206ENST00000438647 IDI1Q13907 227 aa37.3■■■■□ 3.56
RAPGEF1-206ENST00000438647 PIK3C2BO00750 1634 aa37.29■■■■□ 3.56
RAPGEF1-206ENST00000438647 FBXO41Q8TF61 875 aa37.29■■■■□ 3.56
RAPGEF1-206ENST00000438647 MED14O60244 1454 aa37.26■■■■□ 3.56
RAPGEF1-206ENST00000438647 KDM5AP29375 1690 aaKnown RBP37.26■■■■□ 3.56
RAPGEF1-206ENST00000438647 NPHP4O75161 1426 aaPredicted RBP37.24■■■■□ 3.55
RAPGEF1-206ENST00000438647 SLIT1O75093 1534 aa37.24■■■■□ 3.55
RAPGEF1-206ENST00000438647 E9PCH4 1651 aa37.23■■■■□ 3.55
RAPGEF1-206ENST00000438647 ARHGAP23Q9P227 1491 aa37.23■■■■□ 3.55
RAPGEF1-206ENST00000438647 LTBP4Q8N2S1 1624 aa37.22■■■■□ 3.55
RAPGEF1-206ENST00000438647 EID1Q9Y6B2 187 aa37.2■■■■□ 3.55
RAPGEF1-206ENST00000438647 SCAF11Q99590 1463 aaKnown RBP37.2■■■■□ 3.54
RAPGEF1-206ENST00000438647 ZNF335Q9H4Z2 1342 aaPredicted RBP37.19■■■■□ 3.54
RAPGEF1-206ENST00000438647 ADGRB3O60242 1522 aa37.19■■■■□ 3.54
RAPGEF1-206ENST00000438647 TMEM2Q9UHN6 1383 aa37.18■■■■□ 3.54
RAPGEF1-206ENST00000438647 TXNDC2Q86VQ3 553 aa37.17■■■■□ 3.54
RAPGEF1-206ENST00000438647 IQGAP1P46940 1657 aa37.15■■■■□ 3.54
RAPGEF1-206ENST00000438647 LTKP29376 864 aa37.12■■■■□ 3.53
RAPGEF1-206ENST00000438647 IQSEC2Q5JU85 1478 aa37.1■■■■□ 3.53
RAPGEF1-206ENST00000438647 TRIM52Q96A61 297 aa37.1■■■■□ 3.53
RAPGEF1-206ENST00000438647 TMEM131LA2VDJ0 1609 aa37.02■■■■□ 3.52
RAPGEF1-206ENST00000438647 CPS1P31327 1500 aa37.01■■■■□ 3.52
RAPGEF1-206ENST00000438647 CHGAP10645 457 aaKnown RBP37.01■■■■□ 3.52
RAPGEF1-206ENST00000438647 HDGFP51858 240 aaKnown RBP37.01■■■■□ 3.52
RAPGEF1-206ENST00000438647 SPHKAPQ2M3C7 1700 aa37.01■■■■□ 3.51
RAPGEF1-206ENST00000438647 SLC4A1APQ9BWU0 796 aaKnown RBP36.98■■■■□ 3.51
RAPGEF1-206ENST00000438647 ACIN1Q9UKV3 1341 aaKnown RBP36.97■■■■□ 3.51
RAPGEF1-206ENST00000438647 MYO5BQ9ULV0 1848 aa36.95■■■■□ 3.51
RAPGEF1-206ENST00000438647 ZFYVE9O95405 1425 aa36.94■■■■□ 3.5
RAPGEF1-206ENST00000438647 RIMS2Q9UQ26 1411 aa36.94■■■■□ 3.5
RAPGEF1-206ENST00000438647 PPP1R15AO75807 674 aaPredicted RBP36.92■■■■□ 3.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms