RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 EIF2AK4Q9P2K8 1649 aaKnown RBP27.4■■□□□ 1.98
NCSTN-208ENST00000438008 NPATQ14207 1427 aa27.4■■□□□ 1.98
NCSTN-208ENST00000438008 CHIC2Q9UKJ5 165 aa27.39■■□□□ 1.98
NCSTN-208ENST00000438008 NCOA1Q15788 1441 aa27.39■■□□□ 1.97
NCSTN-208ENST00000438008 SETD1BQ9UPS6 1966 aaKnown RBP27.38■■□□□ 1.97
NCSTN-208ENST00000438008 ADGRL2O95490 1459 aa27.38■■□□□ 1.97
NCSTN-208ENST00000438008 ERBINQ96RT1 1412 aa27.37■■□□□ 1.97
NCSTN-208ENST00000438008 RNF17Q9BXT8 1623 aaKnown RBP27.37■■□□□ 1.97
NCSTN-208ENST00000438008 WASHC2CQ9Y4E1 1318 aa27.37■■□□□ 1.97
NCSTN-208ENST00000438008 PREX1Q8TCU6 1659 aa27.36■■□□□ 1.97
NCSTN-208ENST00000438008 KDM5DQ9BY66 1539 aa27.36■■□□□ 1.97
NCSTN-208ENST00000438008 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.36■■□□□ 1.97
NCSTN-208ENST00000438008 UHRF1BP1Q6BDS2 1440 aa27.36■■□□□ 1.97
NCSTN-208ENST00000438008 PTPRKQ15262 1439 aa27.34■■□□□ 1.97
NCSTN-208ENST00000438008 HSPA2P54652 639 aa27.34■■□□□ 1.97
NCSTN-208ENST00000438008 MROH1Q8NDA8 1641 aa27.29■■□□□ 1.96
NCSTN-208ENST00000438008 PZPP20742 1482 aa27.27■■□□□ 1.96
NCSTN-208ENST00000438008 ABCC3O15438 1527 aa27.26■■□□□ 1.96
NCSTN-208ENST00000438008 RRBP1Q9P2E9 1410 aaKnown RBP27.26■■□□□ 1.95
NCSTN-208ENST00000438008 ROCK1Q13464 1354 aa27.24■■□□□ 1.95
NCSTN-208ENST00000438008 ZC3H13Q5T200 1668 aaKnown RBP27.24■■□□□ 1.95
NCSTN-208ENST00000438008 PRDM15P57071 1507 aaPredicted RBP27.23■■□□□ 1.95
NCSTN-208ENST00000438008 FBXO31Q5XUX0 539 aaPredicted RBP27.22■■□□□ 1.95
NCSTN-208ENST00000438008 DEPDC5O75140 1603 aa27.21■■□□□ 1.95
NCSTN-208ENST00000438008 ANKRD50Q9ULJ7 1429 aa27.21■■□□□ 1.95
NCSTN-208ENST00000438008 KANK1Q14678 1352 aa27.18■■□□□ 1.94
NCSTN-208ENST00000438008 TNRQ92752 1358 aa27.18■■□□□ 1.94
NCSTN-208ENST00000438008 ITGAEP38570 1179 aa27.17■■□□□ 1.94
NCSTN-208ENST00000438008 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.17■■□□□ 1.94
NCSTN-208ENST00000438008 MYO3AQ8NEV4 1616 aa27.16■■□□□ 1.94
NCSTN-208ENST00000438008 ARHGAP31Q2M1Z3 1444 aa27.15■■□□□ 1.94
NCSTN-208ENST00000438008 VWDEQ8N2E2 1590 aa27.14■■□□□ 1.93
NCSTN-208ENST00000438008 CEP170BQ9Y4F5 1589 aaPredicted RBP27.13■■□□□ 1.93
NCSTN-208ENST00000438008 LMTK2Q8IWU2 1503 aa27.12■■□□□ 1.93
NCSTN-208ENST00000438008 ZNF142P52746 1687 aaPredicted RBP27.12■■□□□ 1.93
NCSTN-208ENST00000438008 CEP152O94986 1710 aa27.12■■□□□ 1.93
NCSTN-208ENST00000438008 A2ML1A8K2U0 1454 aa27.12■■□□□ 1.93
NCSTN-208ENST00000438008 CAMSAP1Q5T5Y3 1602 aa27.12■■□□□ 1.93
NCSTN-208ENST00000438008 SPATA31D1Q6ZQQ2 1576 aa27.1■■□□□ 1.93
NCSTN-208ENST00000438008 ERVK-7P63135 1459 aa27.09■■□□□ 1.93
NCSTN-208ENST00000438008 DMRT2Q9Y5R5 561 aa27.09■■□□□ 1.93
NCSTN-208ENST00000438008 NLRP1Q9C000 1473 aa27.08■■□□□ 1.93
NCSTN-208ENST00000438008 STRCQ7RTU9 1775 aa27.07■■□□□ 1.92
NCSTN-208ENST00000438008 PLA2R1Q13018 1463 aa27.06■■□□□ 1.92
NCSTN-208ENST00000438008 PTPRTO14522 1441 aa27.02■■□□□ 1.92
NCSTN-208ENST00000438008 UNC13BO14795 1591 aa27.01■■□□□ 1.92
NCSTN-208ENST00000438008 PKD2Q13563 968 aa27■■□□□ 1.91
NCSTN-208ENST00000438008 EFCAB6Q5THR3 1501 aa27■■□□□ 1.91
NCSTN-208ENST00000438008 THEMISQ8N1K5 641 aaPredicted RBP26.99■■□□□ 1.91
NCSTN-208ENST00000438008 UGGT1Q9NYU2 1555 aa26.97■■□□□ 1.91
NCSTN-208ENST00000438008 NCKAP5LQ9HCH0 1330 aa26.96■■□□□ 1.91
NCSTN-208ENST00000438008 RPRD2Q5VT52 1461 aaKnown RBP26.95■■□□□ 1.91
NCSTN-208ENST00000438008 NAIPQ13075 1403 aa26.95■■□□□ 1.9
NCSTN-208ENST00000438008 NOS1P29475 1434 aa26.94■■□□□ 1.9
NCSTN-208ENST00000438008 NUP155O75694 1391 aa26.93■■□□□ 1.9
NCSTN-208ENST00000438008 TET3O43151 1660 aa26.92■■□□□ 1.9
NCSTN-208ENST00000438008 CFAP65Q6ZU64 1925 aaKnown RBP26.92■■□□□ 1.9
NCSTN-208ENST00000438008 HFM1A2PYH4 1435 aa26.91■■□□□ 1.9
NCSTN-208ENST00000438008 IQGAP3Q86VI3 1631 aa26.9■■□□□ 1.9
NCSTN-208ENST00000438008 ANKLE2Q86XL3 938 aa26.88■■□□□ 1.89
NCSTN-208ENST00000438008 IDI1Q13907 227 aa26.87■■□□□ 1.89
NCSTN-208ENST00000438008 SLC52A1Q9NWF4 448 aa26.87■■□□□ 1.89
NCSTN-208ENST00000438008 GCC2Q8IWJ2 1684 aa26.86■■□□□ 1.89
NCSTN-208ENST00000438008 SYNMO15061 1565 aa26.86■■□□□ 1.89
NCSTN-208ENST00000438008 UBR1Q8IWV7 1749 aa26.84■■□□□ 1.89
NCSTN-208ENST00000438008 NEURL4Q96JN8 1562 aa26.81■■□□□ 1.88
NCSTN-208ENST00000438008 MED14O60244 1454 aa26.81■■□□□ 1.88
NCSTN-208ENST00000438008 PIK3C2BO00750 1634 aa26.8■■□□□ 1.88
NCSTN-208ENST00000438008 ARHGAP23Q9P227 1491 aa26.8■■□□□ 1.88
NCSTN-208ENST00000438008 E9PCH4 1651 aa26.79■■□□□ 1.88
NCSTN-208ENST00000438008 CERKQ8TCT0 537 aa26.79■■□□□ 1.88
NCSTN-208ENST00000438008 STAG3Q9UJ98 1225 aa26.79■■□□□ 1.88
NCSTN-208ENST00000438008 SLIT1O75093 1534 aa26.79■■□□□ 1.88
NCSTN-208ENST00000438008 KDM5AP29375 1690 aaKnown RBP26.79■■□□□ 1.88
NCSTN-208ENST00000438008 POLR1AO95602 1720 aaPredicted RBP26.79■■□□□ 1.88
NCSTN-208ENST00000438008 NPHP4O75161 1426 aaPredicted RBP26.76■■□□□ 1.87
NCSTN-208ENST00000438008 TMEM2Q9UHN6 1383 aa26.76■■□□□ 1.87
NCSTN-208ENST00000438008 LTBP4Q8N2S1 1624 aa26.74■■□□□ 1.87
NCSTN-208ENST00000438008 LTKP29376 864 aa26.73■■□□□ 1.87
NCSTN-208ENST00000438008 ILDR1Q86SU0 546 aaPredicted RBP26.73■■□□□ 1.87
NCSTN-208ENST00000438008 TXNDC2Q86VQ3 553 aa26.73■■□□□ 1.87
NCSTN-208ENST00000438008 ADGRB3O60242 1522 aa26.73■■□□□ 1.87
NCSTN-208ENST00000438008 SCAF11Q99590 1463 aaKnown RBP26.73■■□□□ 1.87
NCSTN-208ENST00000438008 EID1Q9Y6B2 187 aa26.72■■□□□ 1.87
NCSTN-208ENST00000438008 ZNF335Q9H4Z2 1342 aaPredicted RBP26.71■■□□□ 1.87
NCSTN-208ENST00000438008 FBXO41Q8TF61 875 aa26.71■■□□□ 1.87
NCSTN-208ENST00000438008 TRIM52Q96A61 297 aa26.71■■□□□ 1.87
NCSTN-208ENST00000438008 IQGAP1P46940 1657 aa26.66■■□□□ 1.86
NCSTN-208ENST00000438008 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
NCSTN-208ENST00000438008 TMEM131LA2VDJ0 1609 aa26.65■■□□□ 1.86
NCSTN-208ENST00000438008 SLC4A1APQ9BWU0 796 aaKnown RBP26.64■■□□□ 1.86
NCSTN-208ENST00000438008 SETD5Q9C0A6 1442 aa26.64■■□□□ 1.85
NCSTN-208ENST00000438008 IQSEC2Q5JU85 1478 aa26.62■■□□□ 1.85
NCSTN-208ENST00000438008 SPHKAPQ2M3C7 1700 aa26.6■■□□□ 1.85
NCSTN-208ENST00000438008 ZFYVE9O95405 1425 aa26.6■■□□□ 1.85
NCSTN-208ENST00000438008 CHGAP10645 457 aaKnown RBP26.6■■□□□ 1.85
NCSTN-208ENST00000438008 HDGFP51858 240 aaKnown RBP26.6■■□□□ 1.85
NCSTN-208ENST00000438008 RIMS2Q9UQ26 1411 aa26.58■■□□□ 1.85
NCSTN-208ENST00000438008 TRPM2O94759 1503 aa26.58■■□□□ 1.85
NCSTN-208ENST00000438008 CPS1P31327 1500 aa26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms