RNA–Protein interactions for RNA: ENST00000437900.1

LINC01007-202, Transcript of long intergenic non-protein coding RNA 1007, humanhuman

TSL 1 (best)

Gene LINC01007, Length 1,485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01007-202ENST00000437900 DEPDC5O75140 1603 aa21.13■□□□□ 0.97
LINC01007-202ENST00000437900 ATP10AO60312 1499 aa21.12■□□□□ 0.97
LINC01007-202ENST00000437900 PZPP20742 1482 aa21.12■□□□□ 0.97
LINC01007-202ENST00000437900 TRIM52Q96A61 297 aa21.12■□□□□ 0.97
LINC01007-202ENST00000437900 NUP155O75694 1391 aa21.1■□□□□ 0.97
LINC01007-202ENST00000437900 RNF17Q9BXT8 1623 aaKnown RBP21.09■□□□□ 0.97
LINC01007-202ENST00000437900 MPHOSPH9Q99550 1183 aa21.08■□□□□ 0.97
LINC01007-202ENST00000437900 PRDM15P57071 1507 aaPredicted RBP21.08■□□□□ 0.97
LINC01007-202ENST00000437900 IQGAP3Q86VI3 1631 aa21.08■□□□□ 0.97
LINC01007-202ENST00000437900 AGLP35573 1532 aa21.07■□□□□ 0.96
LINC01007-202ENST00000437900 VWDEQ8N2E2 1590 aa21.06■□□□□ 0.96
LINC01007-202ENST00000437900 FAM135AQ9P2D6 1515 aa21.06■□□□□ 0.96
LINC01007-202ENST00000437900 MROH1Q8NDA8 1641 aa21.06■□□□□ 0.96
LINC01007-202ENST00000437900 KIF3BO15066 747 aa21.06■□□□□ 0.96
LINC01007-202ENST00000437900 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
LINC01007-202ENST00000437900 KANK1Q14678 1352 aa21.01■□□□□ 0.95
LINC01007-202ENST00000437900 ZEB1P37275 1124 aaPredicted RBP21.01■□□□□ 0.95
LINC01007-202ENST00000437900 LMTK2Q8IWU2 1503 aa20.99■□□□□ 0.95
LINC01007-202ENST00000437900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.98■□□□□ 0.95
LINC01007-202ENST00000437900 PKD2Q13563 968 aa20.96■□□□□ 0.95
LINC01007-202ENST00000437900 ANKRD30BQ9BXX2 1392 aa20.96■□□□□ 0.95
LINC01007-202ENST00000437900 TET3O43151 1660 aa20.95■□□□□ 0.94
LINC01007-202ENST00000437900 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
LINC01007-202ENST00000437900 PPP6R1Q9UPN7 881 aa20.94■□□□□ 0.94
LINC01007-202ENST00000437900 ABCC3O15438 1527 aa20.92■□□□□ 0.94
LINC01007-202ENST00000437900 ZC3H13Q5T200 1668 aaKnown RBP20.92■□□□□ 0.94
LINC01007-202ENST00000437900 GGT6Q6P531 493 aa20.91■□□□□ 0.94
LINC01007-202ENST00000437900 EFCAB6Q5THR3 1501 aa20.91■□□□□ 0.94
LINC01007-202ENST00000437900 FOXD1Q16676 465 aa20.89■□□□□ 0.94
LINC01007-202ENST00000437900 RPRD2Q5VT52 1461 aaKnown RBP20.88■□□□□ 0.93
LINC01007-202ENST00000437900 E9PCH4 1651 aa20.88■□□□□ 0.93
LINC01007-202ENST00000437900 CEP152O94986 1710 aa20.87■□□□□ 0.93
LINC01007-202ENST00000437900 WASHC2CQ9Y4E1 1318 aa20.86■□□□□ 0.93
LINC01007-202ENST00000437900 ARHGAP31Q2M1Z3 1444 aa20.86■□□□□ 0.93
LINC01007-202ENST00000437900 TIMELESSQ9UNS1 1208 aa20.86■□□□□ 0.93
LINC01007-202ENST00000437900 PTPRTO14522 1441 aa20.85■□□□□ 0.93
LINC01007-202ENST00000437900 SIN3AQ96ST3 1273 aa20.85■□□□□ 0.93
LINC01007-202ENST00000437900 PLA2R1Q13018 1463 aa20.85■□□□□ 0.93
LINC01007-202ENST00000437900 CAMSAP1Q5T5Y3 1602 aa20.84■□□□□ 0.93
LINC01007-202ENST00000437900 NPATQ14207 1427 aa20.83■□□□□ 0.92
LINC01007-202ENST00000437900 TRPM2O94759 1503 aa20.81■□□□□ 0.92
LINC01007-202ENST00000437900 ARID4BQ4LE39 1312 aaPredicted RBP20.79■□□□□ 0.92
LINC01007-202ENST00000437900 SPHKAPQ2M3C7 1700 aa20.78■□□□□ 0.92
LINC01007-202ENST00000437900 CCDC144AA2RUR9 1427 aa20.77■□□□□ 0.92
LINC01007-202ENST00000437900 CNTLNQ9NXG0 1405 aa20.77■□□□□ 0.92
LINC01007-202ENST00000437900 NEUROD1Q13562 356 aa20.77■□□□□ 0.92
LINC01007-202ENST00000437900 NOS1P29475 1434 aa20.76■□□□□ 0.91
LINC01007-202ENST00000437900 MLECQ14165 292 aa20.75■□□□□ 0.91
LINC01007-202ENST00000437900 CLTCQ00610 1675 aaKnown RBP20.74■□□□□ 0.91
LINC01007-202ENST00000437900 TONSLQ96HA7 1378 aa20.74■□□□□ 0.91
LINC01007-202ENST00000437900 MROH2AA6NES4 1674 aa20.72■□□□□ 0.91
LINC01007-202ENST00000437900 NEURL4Q96JN8 1562 aa20.71■□□□□ 0.91
LINC01007-202ENST00000437900 ESF1Q9H501 851 aaKnown RBP20.7■□□□□ 0.9
LINC01007-202ENST00000437900 CLTCL1P53675 1640 aa20.69■□□□□ 0.9
LINC01007-202ENST00000437900 ZMYM3Q14202 1370 aa20.69■□□□□ 0.9
LINC01007-202ENST00000437900 ERVK-7P63135 1459 aa20.68■□□□□ 0.9
LINC01007-202ENST00000437900 PREX1Q8TCU6 1659 aa20.68■□□□□ 0.9
LINC01007-202ENST00000437900 SPATA31E1Q6ZUB1 1445 aa20.67■□□□□ 0.9
LINC01007-202ENST00000437900 SYNMO15061 1565 aa20.67■□□□□ 0.9
LINC01007-202ENST00000437900 SPATA31D1Q6ZQQ2 1576 aa20.67■□□□□ 0.9
LINC01007-202ENST00000437900 PIK3C2BO00750 1634 aa20.66■□□□□ 0.9
LINC01007-202ENST00000437900 FER1L4A9Z1Z3 1794 aa20.65■□□□□ 0.9
LINC01007-202ENST00000437900 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
LINC01007-202ENST00000437900 PPP1R15AO75807 674 aaPredicted RBP20.64■□□□□ 0.89
LINC01007-202ENST00000437900 ADAMTSL3P82987 1691 aa20.64■□□□□ 0.89
LINC01007-202ENST00000437900 SLC52A1Q9NWF4 448 aa20.63■□□□□ 0.89
LINC01007-202ENST00000437900 UGGT1Q9NYU2 1555 aa20.63■□□□□ 0.89
LINC01007-202ENST00000437900 CFAP65Q6ZU64 1925 aaKnown RBP20.61■□□□□ 0.89
LINC01007-202ENST00000437900 FBXO31Q5XUX0 539 aaPredicted RBP20.6■□□□□ 0.89
LINC01007-202ENST00000437900 MADDQ8WXG6 1647 aa20.6■□□□□ 0.89
LINC01007-202ENST00000437900 ADGRB3O60242 1522 aa20.6■□□□□ 0.89
LINC01007-202ENST00000437900 KIF1BO60333 1816 aa20.57■□□□□ 0.88
LINC01007-202ENST00000437900 C3P01024 1663 aa20.57■□□□□ 0.88
LINC01007-202ENST00000437900 STAC3Q96MF2 364 aa20.56■□□□□ 0.88
LINC01007-202ENST00000437900 UHRF1BP1Q6BDS2 1440 aa20.56■□□□□ 0.88
LINC01007-202ENST00000437900 IDI1Q13907 227 aa20.56■□□□□ 0.88
LINC01007-202ENST00000437900 TNRQ92752 1358 aa20.54■□□□□ 0.88
LINC01007-202ENST00000437900 RIMS1Q86UR5 1692 aaKnown RBP20.52■□□□□ 0.88
LINC01007-202ENST00000437900 RGL3Q3MIN7 710 aa20.52■□□□□ 0.88
LINC01007-202ENST00000437900 TMEM131LA2VDJ0 1609 aa20.52■□□□□ 0.87
LINC01007-202ENST00000437900 DCAF11Q8TEB1 546 aa20.5■□□□□ 0.87
LINC01007-202ENST00000437900 RPGRIP1LQ68CZ1 1315 aa20.5■□□□□ 0.87
LINC01007-202ENST00000437900 NLRP1Q9C000 1473 aa20.5■□□□□ 0.87
LINC01007-202ENST00000437900 KDM5AP29375 1690 aaKnown RBP20.49■□□□□ 0.87
LINC01007-202ENST00000437900 MYOM2P54296 1465 aa20.49■□□□□ 0.87
LINC01007-202ENST00000437900 PRAG1Q86YV5 1406 aa20.48■□□□□ 0.87
LINC01007-202ENST00000437900 CEBPAP49715 358 aaPredicted RBP20.48■□□□□ 0.87
LINC01007-202ENST00000437900 IFT172Q9UG01 1749 aa20.48■□□□□ 0.87
LINC01007-202ENST00000437900 NBPF8Q3BBV2 869 aa20.47■□□□□ 0.87
LINC01007-202ENST00000437900 A2ML1A8K2U0 1454 aa20.46■□□□□ 0.87
LINC01007-202ENST00000437900 NRXN1Q9ULB1 1477 aa20.45■□□□□ 0.86
LINC01007-202ENST00000437900 PTPRMP28827 1452 aa20.44■□□□□ 0.86
LINC01007-202ENST00000437900 NEXMIFQ5QGS0 1516 aa20.44■□□□□ 0.86
LINC01007-202ENST00000437900 RALGAPBQ86X10 1494 aa20.44■□□□□ 0.86
LINC01007-202ENST00000437900 CHGAP10645 457 aaKnown RBP20.43■□□□□ 0.86
LINC01007-202ENST00000437900 PPLO60437 1756 aa20.43■□□□□ 0.86
LINC01007-202ENST00000437900 ZFYVE9O95405 1425 aa20.43■□□□□ 0.86
LINC01007-202ENST00000437900 KDM2AQ9Y2K7 1162 aa20.43■□□□□ 0.86
LINC01007-202ENST00000437900 ZNF326Q5BKZ1 582 aaKnown RBP20.42■□□□□ 0.86
LINC01007-202ENST00000437900 MYO3AQ8NEV4 1616 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms