RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 ARHGEF40Q8TER5 1519 aa21.36■■□□□ 1.01
CD4-202ENST00000437800 A2MP01023 1474 aa21.36■■□□□ 1.01
CD4-202ENST00000437800 UNC13BO14795 1591 aa21.35■■□□□ 1.01
CD4-202ENST00000437800 MAGI2Q86UL8 1455 aa21.35■■□□□ 1.01
CD4-202ENST00000437800 EIF2AK4Q9P2K8 1649 aaKnown RBP21.34■■□□□ 1.01
CD4-202ENST00000437800 DHX29Q7Z478 1369 aaKnown RBP21.33■■□□□ 1.01
CD4-202ENST00000437800 TRIM52Q96A61 297 aa21.33■■□□□ 1.01
CD4-202ENST00000437800 SIGLEC1Q9BZZ2 1709 aa21.31■■□□□ 1
CD4-202ENST00000437800 DEPDC5O75140 1603 aa21.31■■□□□ 1
CD4-202ENST00000437800 PZPP20742 1482 aa21.3■■□□□ 1
CD4-202ENST00000437800 KDM5DQ9BY66 1539 aa21.29■■□□□ 1
CD4-202ENST00000437800 MROH1Q8NDA8 1641 aa21.29■■□□□ 1
CD4-202ENST00000437800 BCL11AQ9H165 835 aa21.29■■□□□ 1
CD4-202ENST00000437800 BCORL1Q5H9F3 1711 aa21.27■■□□□ 1
CD4-202ENST00000437800 ATP10AO60312 1499 aa21.27■■□□□ 1
CD4-202ENST00000437800 RNF17Q9BXT8 1623 aaKnown RBP21.27■■□□□ 1
CD4-202ENST00000437800 NUP155O75694 1391 aa21.26■□□□□ 0.99
CD4-202ENST00000437800 IQGAP3Q86VI3 1631 aa21.26■□□□□ 0.99
CD4-202ENST00000437800 REREQ9P2R6 1566 aa21.25■□□□□ 0.99
CD4-202ENST00000437800 KIF3BO15066 747 aa21.25■□□□□ 0.99
CD4-202ENST00000437800 PRDM15P57071 1507 aaPredicted RBP21.25■□□□□ 0.99
CD4-202ENST00000437800 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.25■□□□□ 0.99
CD4-202ENST00000437800 FAM135AQ9P2D6 1515 aa21.24■□□□□ 0.99
CD4-202ENST00000437800 MIER1Q8N108 512 aa21.21■□□□□ 0.99
CD4-202ENST00000437800 MPHOSPH9Q99550 1183 aa21.21■□□□□ 0.99
CD4-202ENST00000437800 CEP152O94986 1710 aa21.2■□□□□ 0.98
CD4-202ENST00000437800 SLC4A1APQ9BWU0 796 aaKnown RBP21.2■□□□□ 0.98
CD4-202ENST00000437800 VWDEQ8N2E2 1590 aa21.19■□□□□ 0.98
CD4-202ENST00000437800 FOXD1Q16676 465 aa21.18■□□□□ 0.98
CD4-202ENST00000437800 AGLP35573 1532 aa21.17■□□□□ 0.98
CD4-202ENST00000437800 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
CD4-202ENST00000437800 GGT6Q6P531 493 aa21.15■□□□□ 0.98
CD4-202ENST00000437800 TET3O43151 1660 aa21.14■□□□□ 0.97
CD4-202ENST00000437800 PKD2Q13563 968 aa21.13■□□□□ 0.97
CD4-202ENST00000437800 KANK1Q14678 1352 aa21.13■□□□□ 0.97
CD4-202ENST00000437800 E9PCH4 1651 aa21.12■□□□□ 0.97
CD4-202ENST00000437800 ABCC3O15438 1527 aa21.12■□□□□ 0.97
CD4-202ENST00000437800 EFCAB6Q5THR3 1501 aa21.1■□□□□ 0.97
CD4-202ENST00000437800 ZC3H13Q5T200 1668 aaKnown RBP21.1■□□□□ 0.97
CD4-202ENST00000437800 CAMSAP1Q5T5Y3 1602 aa21.09■□□□□ 0.97
CD4-202ENST00000437800 ANP32EQ9BTT0 268 aa21.09■□□□□ 0.97
CD4-202ENST00000437800 LMTK2Q8IWU2 1503 aa21.09■□□□□ 0.97
CD4-202ENST00000437800 TIMELESSQ9UNS1 1208 aa21.08■□□□□ 0.97
CD4-202ENST00000437800 MLECQ14165 292 aa21.07■□□□□ 0.96
CD4-202ENST00000437800 ARID4BQ4LE39 1312 aaPredicted RBP21.07■□□□□ 0.96
CD4-202ENST00000437800 CLTCQ00610 1675 aaKnown RBP21.06■□□□□ 0.96
CD4-202ENST00000437800 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
CD4-202ENST00000437800 WASHC2CQ9Y4E1 1318 aa21.04■□□□□ 0.96
CD4-202ENST00000437800 SPHKAPQ2M3C7 1700 aa21.03■□□□□ 0.96
CD4-202ENST00000437800 CFAP65Q6ZU64 1925 aaKnown RBP21.02■□□□□ 0.96
CD4-202ENST00000437800 PLA2R1Q13018 1463 aa21.01■□□□□ 0.95
CD4-202ENST00000437800 NPATQ14207 1427 aa21■□□□□ 0.95
CD4-202ENST00000437800 YTHDC1Q96MU7 727 aaKnown RBP20.99■□□□□ 0.95
CD4-202ENST00000437800 FER1L4A9Z1Z3 1794 aa20.98■□□□□ 0.95
CD4-202ENST00000437800 TRPM2O94759 1503 aa20.97■□□□□ 0.95
CD4-202ENST00000437800 PPP1R15AO75807 674 aaPredicted RBP20.96■□□□□ 0.95
CD4-202ENST00000437800 RPRD2Q5VT52 1461 aaKnown RBP20.95■□□□□ 0.94
CD4-202ENST00000437800 CLTCL1P53675 1640 aa20.94■□□□□ 0.94
CD4-202ENST00000437800 UGGT1Q9NYU2 1555 aa20.94■□□□□ 0.94
CD4-202ENST00000437800 TONSLQ96HA7 1378 aa20.94■□□□□ 0.94
CD4-202ENST00000437800 PREX1Q8TCU6 1659 aa20.94■□□□□ 0.94
CD4-202ENST00000437800 PTPRTO14522 1441 aa20.93■□□□□ 0.94
CD4-202ENST00000437800 CCDC144AA2RUR9 1427 aa20.93■□□□□ 0.94
CD4-202ENST00000437800 ARHGAP31Q2M1Z3 1444 aa20.93■□□□□ 0.94
CD4-202ENST00000437800 MADDQ8WXG6 1647 aa20.91■□□□□ 0.94
CD4-202ENST00000437800 SYNMO15061 1565 aa20.91■□□□□ 0.94
CD4-202ENST00000437800 PPP6R1Q9UPN7 881 aa20.91■□□□□ 0.94
CD4-202ENST00000437800 MROH2AA6NES4 1674 aa20.91■□□□□ 0.94
CD4-202ENST00000437800 ESF1Q9H501 851 aaKnown RBP20.89■□□□□ 0.93
CD4-202ENST00000437800 NOS1P29475 1434 aa20.87■□□□□ 0.93
CD4-202ENST00000437800 RIMS1Q86UR5 1692 aaKnown RBP20.87■□□□□ 0.93
CD4-202ENST00000437800 ERVK-7P63135 1459 aa20.87■□□□□ 0.93
CD4-202ENST00000437800 ADAMTSL3P82987 1691 aa20.87■□□□□ 0.93
CD4-202ENST00000437800 CNTLNQ9NXG0 1405 aa20.86■□□□□ 0.93
CD4-202ENST00000437800 C3P01024 1663 aa20.86■□□□□ 0.93
CD4-202ENST00000437800 ZMYM3Q14202 1370 aa20.85■□□□□ 0.93
CD4-202ENST00000437800 PIK3C2BO00750 1634 aa20.85■□□□□ 0.93
CD4-202ENST00000437800 FBXO31Q5XUX0 539 aaPredicted RBP20.84■□□□□ 0.93
CD4-202ENST00000437800 SPATA31D1Q6ZQQ2 1576 aa20.84■□□□□ 0.93
CD4-202ENST00000437800 KIF1BO60333 1816 aa20.82■□□□□ 0.92
CD4-202ENST00000437800 L3MBTL2Q969R5 705 aa20.81■□□□□ 0.92
CD4-202ENST00000437800 SPATA31E1Q6ZUB1 1445 aa20.79■□□□□ 0.92
CD4-202ENST00000437800 CEBPAP49715 358 aaPredicted RBP20.78■□□□□ 0.92
CD4-202ENST00000437800 PLPPR3Q6T4P5 718 aa20.78■□□□□ 0.92
CD4-202ENST00000437800 ADGRB3O60242 1522 aa20.77■□□□□ 0.92
CD4-202ENST00000437800 PRKCSHP14314 528 aaPredicted RBP20.77■□□□□ 0.92
CD4-202ENST00000437800 MYO5BQ9ULV0 1848 aa20.77■□□□□ 0.92
CD4-202ENST00000437800 RGL3Q3MIN7 710 aa20.75■□□□□ 0.91
CD4-202ENST00000437800 NEURL4Q96JN8 1562 aa20.72■□□□□ 0.91
CD4-202ENST00000437800 TNRQ92752 1358 aa20.72■□□□□ 0.91
CD4-202ENST00000437800 TMEM131LA2VDJ0 1609 aa20.71■□□□□ 0.91
CD4-202ENST00000437800 CHGAP10645 457 aaKnown RBP20.71■□□□□ 0.91
CD4-202ENST00000437800 IDI1Q13907 227 aa20.71■□□□□ 0.91
CD4-202ENST00000437800 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
CD4-202ENST00000437800 TSHZ2Q9NRE2 1034 aa20.71■□□□□ 0.91
CD4-202ENST00000437800 MYO3AQ8NEV4 1616 aa20.69■□□□□ 0.9
CD4-202ENST00000437800 SLC52A1Q9NWF4 448 aa20.68■□□□□ 0.9
CD4-202ENST00000437800 DCAF11Q8TEB1 546 aa20.68■□□□□ 0.9
CD4-202ENST00000437800 SUPT16HQ9Y5B9 1047 aaKnown RBP20.68■□□□□ 0.9
CD4-202ENST00000437800 PPLO60437 1756 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms