RNA–Protein interactions for RNA: ENST00000437124.6

DDR1-237, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-237ENST00000437124 DHX29Q7Z478 1369 aaKnown RBP24.25■■□□□ 1.47
DDR1-237ENST00000437124 FAM135AQ9P2D6 1515 aa24.25■■□□□ 1.47
DDR1-237ENST00000437124 MTUS2Q5JR59 1369 aa24.22■■□□□ 1.47
DDR1-237ENST00000437124 TNRQ92752 1358 aa24.22■■□□□ 1.47
DDR1-237ENST00000437124 PZPP20742 1482 aa24.21■■□□□ 1.47
DDR1-237ENST00000437124 SCAF1Q9H7N4 1312 aaKnown RBP24.21■■□□□ 1.47
DDR1-237ENST00000437124 PIP4K2BP78356 416 aa24.21■■□□□ 1.47
DDR1-237ENST00000437124 CEP162Q5TB80 1403 aa24.2■■□□□ 1.46
DDR1-237ENST00000437124 ZNF644Q9H582 1327 aaPredicted RBP24.2■■□□□ 1.46
DDR1-237ENST00000437124 TIAM1Q13009 1591 aa24.19■■□□□ 1.46
DDR1-237ENST00000437124 KDM5DQ9BY66 1539 aa24.19■■□□□ 1.46
DDR1-237ENST00000437124 FBXO31Q5XUX0 539 aaPredicted RBP24.18■■□□□ 1.46
DDR1-237ENST00000437124 VWDEQ8N2E2 1590 aa24.17■■□□□ 1.46
DDR1-237ENST00000437124 ANKLE2Q86XL3 938 aa24.17■■□□□ 1.46
DDR1-237ENST00000437124 MED14O60244 1454 aa24.16■■□□□ 1.46
DDR1-237ENST00000437124 NLRP1Q9C000 1473 aa24.15■■□□□ 1.46
DDR1-237ENST00000437124 THEMISQ8N1K5 641 aaPredicted RBP24.15■■□□□ 1.46
DDR1-237ENST00000437124 DEPDC5O75140 1603 aa24.14■■□□□ 1.46
DDR1-237ENST00000437124 KIF3BO15066 747 aa24.14■■□□□ 1.45
DDR1-237ENST00000437124 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.14■■□□□ 1.45
DDR1-237ENST00000437124 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
DDR1-237ENST00000437124 MIA2Q96PC5 1412 aa24.13■■□□□ 1.45
DDR1-237ENST00000437124 EHBP1L1Q8N3D4 1523 aa24.13■■□□□ 1.45
DDR1-237ENST00000437124 WASHC2CQ9Y4E1 1318 aa24.11■■□□□ 1.45
DDR1-237ENST00000437124 NPHP4O75161 1426 aaPredicted RBP24.11■■□□□ 1.45
DDR1-237ENST00000437124 CCDC141Q6ZP82 1450 aa24.1■■□□□ 1.45
DDR1-237ENST00000437124 UGGT1Q9NYU2 1555 aa24.1■■□□□ 1.45
DDR1-237ENST00000437124 RSPH4AQ5TD94 716 aa24.09■■□□□ 1.45
DDR1-237ENST00000437124 PHF23Q9BUL5 403 aaPredicted RBP24.07■■□□□ 1.44
DDR1-237ENST00000437124 IQGAP1P46940 1657 aa24.04■■□□□ 1.44
DDR1-237ENST00000437124 LOC105371045A0A1W2PR82 267 aa24.03■■□□□ 1.44
DDR1-237ENST00000437124 CAMSAP2Q08AD1 1489 aa24.02■■□□□ 1.44
DDR1-237ENST00000437124 LRRC7Q96NW7 1537 aa24.02■■□□□ 1.44
DDR1-237ENST00000437124 SYNMO15061 1565 aa24.01■■□□□ 1.43
DDR1-237ENST00000437124 RNF17Q9BXT8 1623 aaKnown RBP24■■□□□ 1.43
DDR1-237ENST00000437124 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
DDR1-237ENST00000437124 NCOA2Q15596 1464 aa23.98■■□□□ 1.43
DDR1-237ENST00000437124 STRCP1A6NGW2 1772 aa23.97■■□□□ 1.43
DDR1-237ENST00000437124 ZC3H13Q5T200 1668 aaKnown RBP23.95■■□□□ 1.43
DDR1-237ENST00000437124 ABCC3O15438 1527 aa23.95■■□□□ 1.43
DDR1-237ENST00000437124 VPS8Q8N3P4 1428 aa23.95■■□□□ 1.42
DDR1-237ENST00000437124 TSPY4P0CV99 314 aa23.94■■□□□ 1.42
DDR1-237ENST00000437124 TSPY10P0CW01 314 aa23.94■■□□□ 1.42
DDR1-237ENST00000437124 ERVK-7P63135 1459 aa23.92■■□□□ 1.42
DDR1-237ENST00000437124 EIF2AK4Q9P2K8 1649 aaKnown RBP23.88■■□□□ 1.41
DDR1-237ENST00000437124 LRRC9Q6ZRR7 1453 aa23.88■■□□□ 1.41
DDR1-237ENST00000437124 MAST1Q9Y2H9 1570 aa23.88■■□□□ 1.41
DDR1-237ENST00000437124 SCAF11Q99590 1463 aaKnown RBP23.87■■□□□ 1.41
DDR1-237ENST00000437124 RGS17Q9UGC6 210 aaPredicted RBP23.87■■□□□ 1.41
DDR1-237ENST00000437124 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
DDR1-237ENST00000437124 MROH1Q8NDA8 1641 aa23.85■■□□□ 1.41
DDR1-237ENST00000437124 ARHGAP23Q9P227 1491 aa23.85■■□□□ 1.41
DDR1-237ENST00000437124 SLIT1O75093 1534 aa23.84■■□□□ 1.41
DDR1-237ENST00000437124 SENP3Q9H4L4 574 aaPredicted RBP23.83■■□□□ 1.41
DDR1-237ENST00000437124 MAP3K1Q13233 1512 aa23.83■■□□□ 1.41
DDR1-237ENST00000437124 KANK4Q5T7N3 995 aaPredicted RBP23.82■■□□□ 1.4
DDR1-237ENST00000437124 LTKP29376 864 aa23.8■■□□□ 1.4
DDR1-237ENST00000437124 FAM135BQ49AJ0 1406 aa23.8■■□□□ 1.4
DDR1-237ENST00000437124 ARHGAP31Q2M1Z3 1444 aa23.79■■□□□ 1.4
DDR1-237ENST00000437124 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
DDR1-237ENST00000437124 XIRP1Q702N8 1843 aaKnown RBP23.77■■□□□ 1.4
DDR1-237ENST00000437124 CEP152O94986 1710 aa23.76■■□□□ 1.39
DDR1-237ENST00000437124 EID1Q9Y6B2 187 aa23.75■■□□□ 1.39
DDR1-237ENST00000437124 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
DDR1-237ENST00000437124 PRDM15P57071 1507 aaPredicted RBP23.73■■□□□ 1.39
DDR1-237ENST00000437124 MYOM3Q5VTT5 1437 aa23.72■■□□□ 1.39
DDR1-237ENST00000437124 TMEM2Q9UHN6 1383 aa23.71■■□□□ 1.39
DDR1-237ENST00000437124 TMEM94Q12767 1356 aa23.68■■□□□ 1.38
DDR1-237ENST00000437124 KDM5AP29375 1690 aaKnown RBP23.68■■□□□ 1.38
DDR1-237ENST00000437124 POTEAQ6S8J7 498 aa23.68■■□□□ 1.38
DDR1-237ENST00000437124 CFAP65Q6ZU64 1925 aaKnown RBP23.67■■□□□ 1.38
DDR1-237ENST00000437124 ERBINQ96RT1 1412 aa23.67■■□□□ 1.38
DDR1-237ENST00000437124 PIK3C2BO00750 1634 aa23.66■■□□□ 1.38
DDR1-237ENST00000437124 KCNA6P17658 529 aa23.65■■□□□ 1.38
DDR1-237ENST00000437124 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
DDR1-237ENST00000437124 ROBO1Q9Y6N7 1651 aa23.64■■□□□ 1.37
DDR1-237ENST00000437124 APLP2Q06481 763 aa23.63■■□□□ 1.37
DDR1-237ENST00000437124 TET3O43151 1660 aa23.63■■□□□ 1.37
DDR1-237ENST00000437124 EFCAB6Q5THR3 1501 aa23.63■■□□□ 1.37
DDR1-237ENST00000437124 STAG3Q9UJ98 1225 aa23.6■■□□□ 1.37
DDR1-237ENST00000437124 NKTRP30414 1462 aaKnown RBP23.6■■□□□ 1.37
DDR1-237ENST00000437124 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
DDR1-237ENST00000437124 NWD1Q149M9 1564 aa23.58■■□□□ 1.37
DDR1-237ENST00000437124 KANK1Q14678 1352 aa23.58■■□□□ 1.37
DDR1-237ENST00000437124 IDI1Q13907 227 aa23.58■■□□□ 1.37
DDR1-237ENST00000437124 PROSER2Q86WR7 435 aaPredicted RBP23.58■■□□□ 1.37
DDR1-237ENST00000437124 SLC26A8Q96RN1 970 aa23.56■■□□□ 1.36
DDR1-237ENST00000437124 CROCC2H7BZ55 1655 aa23.56■■□□□ 1.36
DDR1-237ENST00000437124 ABCC5O15440 1437 aa23.56■■□□□ 1.36
DDR1-237ENST00000437124 PTPN23Q9H3S7 1636 aa23.55■■□□□ 1.36
DDR1-237ENST00000437124 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.54■■□□□ 1.36
DDR1-237ENST00000437124 RRP7BPQ9NSQ0 103 aa23.54■■□□□ 1.36
DDR1-237ENST00000437124 MSH6P52701 1360 aa23.52■■□□□ 1.36
DDR1-237ENST00000437124 JCADQ9P266 1359 aa23.52■■□□□ 1.36
DDR1-237ENST00000437124 NOS1P29475 1434 aa23.52■■□□□ 1.36
DDR1-237ENST00000437124 FGD6Q6ZV73 1430 aa23.51■■□□□ 1.35
DDR1-237ENST00000437124 ADGRB3O60242 1522 aa23.51■■□□□ 1.35
DDR1-237ENST00000437124 RBM33Q96EV2 1170 aaKnown RBP23.51■■□□□ 1.35
DDR1-237ENST00000437124 SLAIN2Q9P270 581 aa23.51■■□□□ 1.35
DDR1-237ENST00000437124 DAPK1P53355 1430 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms