RNA–Protein interactions for RNA: ENST00000437072.5

H2AFV-206, Transcript of H2A histone family member V, humanhuman

TSL 4 BASIC

Gene H2AFV, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-206ENST00000437072 NPHP4O75161 1426 aaPredicted RBP23.94■■□□□ 1.42
H2AFV-206ENST00000437072 INO80Q9ULG1 1556 aaPredicted RBP23.93■■□□□ 1.42
H2AFV-206ENST00000437072 MED14O60244 1454 aa23.91■■□□□ 1.42
H2AFV-206ENST00000437072 SETD1AO15047 1707 aaKnown RBP23.89■■□□□ 1.41
H2AFV-206ENST00000437072 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
H2AFV-206ENST00000437072 SRCAPQ6ZRS2 3230 aa23.88■■□□□ 1.41
H2AFV-206ENST00000437072 GPATCH8Q9UKJ3 1502 aaKnown RBP23.88■■□□□ 1.41
H2AFV-206ENST00000437072 UBTFP17480 764 aaKnown RBP23.87■■□□□ 1.41
H2AFV-206ENST00000437072 THEMISQ8N1K5 641 aaPredicted RBP23.86■■□□□ 1.41
H2AFV-206ENST00000437072 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
H2AFV-206ENST00000437072 KIAA1107Q9UPP5 1409 aa23.83■■□□□ 1.4
H2AFV-206ENST00000437072 IQGAP1P46940 1657 aa23.83■■□□□ 1.4
H2AFV-206ENST00000437072 PZPP20742 1482 aa23.81■■□□□ 1.4
H2AFV-206ENST00000437072 MIA2Q96PC5 1412 aa23.8■■□□□ 1.4
H2AFV-206ENST00000437072 UGGT1Q9NYU2 1555 aa23.8■■□□□ 1.4
H2AFV-206ENST00000437072 SYNMO15061 1565 aa23.79■■□□□ 1.4
H2AFV-206ENST00000437072 CCDC18Q5T9S5 1454 aa23.78■■□□□ 1.4
H2AFV-206ENST00000437072 ADGBQ8N7X0 1667 aa23.78■■□□□ 1.4
H2AFV-206ENST00000437072 FAM135AQ9P2D6 1515 aa23.78■■□□□ 1.4
H2AFV-206ENST00000437072 CASKIN1Q8WXD9 1431 aa23.77■■□□□ 1.4
H2AFV-206ENST00000437072 CFDP1Q9UEE9 299 aaPredicted RBP23.77■■□□□ 1.4
H2AFV-206ENST00000437072 NLRP1Q9C000 1473 aa23.75■■□□□ 1.39
H2AFV-206ENST00000437072 ZNF644Q9H582 1327 aaPredicted RBP23.75■■□□□ 1.39
H2AFV-206ENST00000437072 KIF3BO15066 747 aa23.74■■□□□ 1.39
H2AFV-206ENST00000437072 DHX29Q7Z478 1369 aaKnown RBP23.74■■□□□ 1.39
H2AFV-206ENST00000437072 UPF1Q92900 1129 aaKnown RBP eCLIP23.73■■□□□ 1.392e-12■■■■□ 25.3
H2AFV-206ENST00000437072 PLEKHH2Q8IVE3 1493 aa23.73■■□□□ 1.39
H2AFV-206ENST00000437072 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
H2AFV-206ENST00000437072 FAM135BQ49AJ0 1406 aa23.72■■□□□ 1.39
H2AFV-206ENST00000437072 KDM5DQ9BY66 1539 aa23.72■■□□□ 1.39
H2AFV-206ENST00000437072 WASHC2CQ9Y4E1 1318 aa23.71■■□□□ 1.39
H2AFV-206ENST00000437072 ZC3H13Q5T200 1668 aaKnown RBP23.7■■□□□ 1.38
H2AFV-206ENST00000437072 MBD5Q9P267 1494 aa23.68■■□□□ 1.38
H2AFV-206ENST00000437072 CCNB3Q8WWL7 1395 aa23.65■■□□□ 1.38
H2AFV-206ENST00000437072 RTEL1-TNFRSF6BF6WH68 1400 aa23.64■■□□□ 1.37
H2AFV-206ENST00000437072 LTKP29376 864 aa23.63■■□□□ 1.37
H2AFV-206ENST00000437072 ROBO1Q9Y6N7 1651 aa23.6■■□□□ 1.37
H2AFV-206ENST00000437072 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
H2AFV-206ENST00000437072 RBM33Q96EV2 1170 aaKnown RBP23.58■■□□□ 1.37
H2AFV-206ENST00000437072 SCAF11Q99590 1463 aaKnown RBP23.57■■□□□ 1.36
H2AFV-206ENST00000437072 TRIM52Q96A61 297 aa23.57■■□□□ 1.36
H2AFV-206ENST00000437072 FYCO1Q9BQS8 1478 aa23.56■■□□□ 1.36
H2AFV-206ENST00000437072 TMEM94Q12767 1356 aa23.56■■□□□ 1.36
H2AFV-206ENST00000437072 NCOA2Q15596 1464 aa23.56■■□□□ 1.36
H2AFV-206ENST00000437072 TXNDC2Q86VQ3 553 aa23.54■■□□□ 1.36
H2AFV-206ENST00000437072 ERVK-7P63135 1459 aa23.53■■□□□ 1.36
H2AFV-206ENST00000437072 UBR1Q8IWV7 1749 aa23.52■■□□□ 1.36
H2AFV-206ENST00000437072 ARHGAP23Q9P227 1491 aa23.5■■□□□ 1.35
H2AFV-206ENST00000437072 MAP3K1Q13233 1512 aa23.5■■□□□ 1.35
H2AFV-206ENST00000437072 TIAM1Q13009 1591 aa23.5■■□□□ 1.35
H2AFV-206ENST00000437072 ABCC3O15438 1527 aa23.49■■□□□ 1.35
H2AFV-206ENST00000437072 LRP6O75581 1613 aa23.49■■□□□ 1.35
H2AFV-206ENST00000437072 JCADQ9P266 1359 aa23.49■■□□□ 1.35
H2AFV-206ENST00000437072 SLIT1O75093 1534 aa23.46■■□□□ 1.35
H2AFV-206ENST00000437072 CFAP65Q6ZU64 1925 aaKnown RBP23.45■■□□□ 1.35
H2AFV-206ENST00000437072 PHLPP1O60346 1717 aa23.45■■□□□ 1.34
H2AFV-206ENST00000437072 CCDC141Q6ZP82 1450 aa23.44■■□□□ 1.34
H2AFV-206ENST00000437072 MTUS2Q5JR59 1369 aa23.44■■□□□ 1.34
H2AFV-206ENST00000437072 PROSER2Q86WR7 435 aaPredicted RBP23.44■■□□□ 1.34
H2AFV-206ENST00000437072 KCNA6P17658 529 aa23.42■■□□□ 1.34
H2AFV-206ENST00000437072 ZNF772Q68DY9 489 aaPredicted RBP23.41■■□□□ 1.34
H2AFV-206ENST00000437072 SLAIN2Q9P270 581 aa23.4■■□□□ 1.34
H2AFV-206ENST00000437072 LRRC9Q6ZRR7 1453 aa23.4■■□□□ 1.34
H2AFV-206ENST00000437072 EID1Q9Y6B2 187 aa23.39■■□□□ 1.33
H2AFV-206ENST00000437072 COL16A1Q07092 1604 aaPredicted RBP23.38■■□□□ 1.33
H2AFV-206ENST00000437072 RXRBP28702 533 aa23.38■■□□□ 1.33
H2AFV-206ENST00000437072 MEX3CQ5U5Q3 659 aaKnown RBP23.38■■□□□ 1.33
H2AFV-206ENST00000437072 SLC26A8Q96RN1 970 aa23.38■■□□□ 1.33
H2AFV-206ENST00000437072 PRDM15P57071 1507 aaPredicted RBP23.35■■□□□ 1.33
H2AFV-206ENST00000437072 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
H2AFV-206ENST00000437072 TMEM2Q9UHN6 1383 aa23.35■■□□□ 1.33
H2AFV-206ENST00000437072 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
H2AFV-206ENST00000437072 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.33
H2AFV-206ENST00000437072 MSH6P52701 1360 aa23.32■■□□□ 1.32
H2AFV-206ENST00000437072 CEP152O94986 1710 aa23.32■■□□□ 1.32
H2AFV-206ENST00000437072 TET3O43151 1660 aa23.32■■□□□ 1.32
H2AFV-206ENST00000437072 RSPH4AQ5TD94 716 aa23.3■■□□□ 1.32
H2AFV-206ENST00000437072 CEP162Q5TB80 1403 aa23.3■■□□□ 1.32
H2AFV-206ENST00000437072 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
H2AFV-206ENST00000437072 CDK12Q9NYV4 1490 aaPredicted RBP23.28■■□□□ 1.32
H2AFV-206ENST00000437072 FGD6Q6ZV73 1430 aa23.27■■□□□ 1.32
H2AFV-206ENST00000437072 TSPY4P0CV99 314 aa23.27■■□□□ 1.32
H2AFV-206ENST00000437072 TSPY10P0CW01 314 aa23.27■■□□□ 1.32
H2AFV-206ENST00000437072 EHBP1L1Q8N3D4 1523 aa23.27■■□□□ 1.32
H2AFV-206ENST00000437072 NKTRP30414 1462 aaKnown RBP23.26■■□□□ 1.31
H2AFV-206ENST00000437072 NWD1Q149M9 1564 aa23.26■■□□□ 1.31
H2AFV-206ENST00000437072 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
H2AFV-206ENST00000437072 NUTM2BA6NNL0 878 aaPredicted RBP23.23■■□□□ 1.31
H2AFV-206ENST00000437072 NUTM2EB1AL46 878 aaPredicted RBP23.23■■□□□ 1.31
H2AFV-206ENST00000437072 NUTM2AQ8IVF1 878 aaPredicted RBP23.23■■□□□ 1.31
H2AFV-206ENST00000437072 RGS12O14924 1447 aa23.23■■□□□ 1.31
H2AFV-206ENST00000437072 STAG3Q9UJ98 1225 aa23.22■■□□□ 1.31
H2AFV-206ENST00000437072 AFF2P51816 1311 aa23.22■■□□□ 1.31
H2AFV-206ENST00000437072 ARHGAP31Q2M1Z3 1444 aa23.21■■□□□ 1.31
H2AFV-206ENST00000437072 SHPRHQ149N8 1683 aa23.2■■□□□ 1.3
H2AFV-206ENST00000437072 EIF2AK4Q9P2K8 1649 aaKnown RBP23.2■■□□□ 1.3
H2AFV-206ENST00000437072 IDI1Q13907 227 aa23.2■■□□□ 1.3
H2AFV-206ENST00000437072 EFCAB6Q5THR3 1501 aa23.19■■□□□ 1.3
H2AFV-206ENST00000437072 KDM5AP29375 1690 aaKnown RBP23.18■■□□□ 1.3
H2AFV-206ENST00000437072 AHDC1Q5TGY3 1603 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms