RNA–Protein interactions for RNA: ENST00000436883.5

PTPA-220, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 4 BASIC

Gene PTPA, Length 532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-220ENST00000436883 VPS8Q8N3P4 1428 aa24.66■■□□□ 1.54
PTPA-220ENST00000436883 DISP3Q9P2K9 1392 aa24.66■■□□□ 1.54
PTPA-220ENST00000436883 TNRQ92752 1358 aa24.65■■□□□ 1.54
PTPA-220ENST00000436883 A2ML1A8K2U0 1454 aa24.64■■□□□ 1.54
PTPA-220ENST00000436883 IQSEC2Q5JU85 1478 aa24.64■■□□□ 1.53
PTPA-220ENST00000436883 LRRC9Q6ZRR7 1453 aa24.64■■□□□ 1.53
PTPA-220ENST00000436883 TCOF1Q13428 1488 aaKnown RBP24.63■■□□□ 1.53
PTPA-220ENST00000436883 KANK4Q5T7N3 995 aaPredicted RBP24.62■■□□□ 1.53
PTPA-220ENST00000436883 UBAP1LF5GYI3 381 aa24.61■■□□□ 1.53
PTPA-220ENST00000436883 KDM5DQ9BY66 1539 aa24.61■■□□□ 1.53
PTPA-220ENST00000436883 ARHGEF5Q12774 1597 aa24.6■■□□□ 1.53
PTPA-220ENST00000436883 DNMT1P26358 1616 aaKnown RBP24.6■■□□□ 1.53
PTPA-220ENST00000436883 PZPP20742 1482 aa24.58■■□□□ 1.53
PTPA-220ENST00000436883 THEMISQ8N1K5 641 aaPredicted RBP24.55■■□□□ 1.52
PTPA-220ENST00000436883 FAM135AQ9P2D6 1515 aa24.55■■□□□ 1.52
PTPA-220ENST00000436883 MIA2Q96PC5 1412 aa24.54■■□□□ 1.52
PTPA-220ENST00000436883 ANKLE2Q86XL3 938 aa24.54■■□□□ 1.52
PTPA-220ENST00000436883 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.53■■□□□ 1.52
PTPA-220ENST00000436883 ILDR2Q71H61 639 aa24.52■■□□□ 1.52
PTPA-220ENST00000436883 APLP2Q06481 763 aa24.51■■□□□ 1.51
PTPA-220ENST00000436883 MYOM3Q5VTT5 1437 aa24.5■■□□□ 1.51
PTPA-220ENST00000436883 MAP3K1Q13233 1512 aa24.5■■□□□ 1.51
PTPA-220ENST00000436883 MAST1Q9Y2H9 1570 aa24.47■■□□□ 1.51
PTPA-220ENST00000436883 NLRP1Q9C000 1473 aa24.47■■□□□ 1.51
PTPA-220ENST00000436883 SCAF1Q9H7N4 1312 aaKnown RBP24.47■■□□□ 1.51
PTPA-220ENST00000436883 UGGT1Q9NYU2 1555 aa24.46■■□□□ 1.51
PTPA-220ENST00000436883 POLR1AO95602 1720 aaPredicted RBP24.46■■□□□ 1.51
PTPA-220ENST00000436883 ABCC3O15438 1527 aa24.44■■□□□ 1.5
PTPA-220ENST00000436883 RNF17Q9BXT8 1623 aaKnown RBP24.43■■□□□ 1.5
PTPA-220ENST00000436883 SPATA31D1Q6ZQQ2 1576 aa24.43■■□□□ 1.5
PTPA-220ENST00000436883 NEURL4Q96JN8 1562 aa24.43■■□□□ 1.5
PTPA-220ENST00000436883 PIP4K2BP78356 416 aa24.43■■□□□ 1.5
PTPA-220ENST00000436883 RRP7BPQ9NSQ0 103 aa24.42■■□□□ 1.5
PTPA-220ENST00000436883 SHANK2Q9UPX8 1470 aa24.42■■□□□ 1.5
PTPA-220ENST00000436883 NPHP4O75161 1426 aaPredicted RBP24.41■■□□□ 1.5
PTPA-220ENST00000436883 CFAP65Q6ZU64 1925 aaKnown RBP24.4■■□□□ 1.5
PTPA-220ENST00000436883 TOM1O60784 492 aa24.4■■□□□ 1.5
PTPA-220ENST00000436883 EIF2AK4Q9P2K8 1649 aaKnown RBP24.39■■□□□ 1.5
PTPA-220ENST00000436883 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.49
PTPA-220ENST00000436883 CPS1P31327 1500 aa24.39■■□□□ 1.49
PTPA-220ENST00000436883 DUOX2Q9NRD8 1548 aa24.39■■□□□ 1.49
PTPA-220ENST00000436883 ZC3H13Q5T200 1668 aaKnown RBP24.38■■□□□ 1.49
PTPA-220ENST00000436883 SOCS7O14512 581 aa24.37■■□□□ 1.49
PTPA-220ENST00000436883 KIF15Q9NS87 1388 aa24.37■■□□□ 1.49
PTPA-220ENST00000436883 ERVK-7P63135 1459 aa24.37■■□□□ 1.49
PTPA-220ENST00000436883 ABCC5O15440 1437 aa24.35■■□□□ 1.49
PTPA-220ENST00000436883 CEP152O94986 1710 aa24.35■■□□□ 1.49
PTPA-220ENST00000436883 MED14O60244 1454 aa24.34■■□□□ 1.49
PTPA-220ENST00000436883 DEPDC5O75140 1603 aa24.34■■□□□ 1.49
PTPA-220ENST00000436883 MROH1Q8NDA8 1641 aa24.34■■□□□ 1.49
PTPA-220ENST00000436883 HSPA1LP34931 641 aa24.33■■□□□ 1.49
PTPA-220ENST00000436883 CHIC2Q9UKJ5 165 aa24.33■■□□□ 1.49
PTPA-220ENST00000436883 PTPN23Q9H3S7 1636 aa24.32■■□□□ 1.48
PTPA-220ENST00000436883 VWDEQ8N2E2 1590 aa24.32■■□□□ 1.48
PTPA-220ENST00000436883 IQGAP1P46940 1657 aa24.3■■□□□ 1.48
PTPA-220ENST00000436883 DAPK1P53355 1430 aa24.29■■□□□ 1.48
PTPA-220ENST00000436883 KANK1Q14678 1352 aa24.29■■□□□ 1.48
PTPA-220ENST00000436883 ERBINQ96RT1 1412 aa24.28■■□□□ 1.48
PTPA-220ENST00000436883 TXNDC2Q86VQ3 553 aa24.28■■□□□ 1.48
PTPA-220ENST00000436883 FGD6Q6ZV73 1430 aa24.27■■□□□ 1.48
PTPA-220ENST00000436883 STAG3Q9UJ98 1225 aa24.27■■□□□ 1.48
PTPA-220ENST00000436883 CROCC2H7BZ55 1655 aa24.26■■□□□ 1.47
PTPA-220ENST00000436883 LTKP29376 864 aa24.25■■□□□ 1.47
PTPA-220ENST00000436883 EID1Q9Y6B2 187 aa24.25■■□□□ 1.47
PTPA-220ENST00000436883 ANKRD30AQ9BXX3 1397 aa24.25■■□□□ 1.47
PTPA-220ENST00000436883 ARHGAP31Q2M1Z3 1444 aa24.25■■□□□ 1.47
PTPA-220ENST00000436883 PRDM15P57071 1507 aaPredicted RBP24.24■■□□□ 1.47
PTPA-220ENST00000436883 UBR1Q8IWV7 1749 aa24.24■■□□□ 1.47
PTPA-220ENST00000436883 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
PTPA-220ENST00000436883 SCAF11Q99590 1463 aaKnown RBP24.23■■□□□ 1.47
PTPA-220ENST00000436883 FAM50AQ14320 339 aaKnown RBP24.21■■□□□ 1.47
PTPA-220ENST00000436883 LRRC7Q96NW7 1537 aa24.19■■□□□ 1.46
PTPA-220ENST00000436883 STRCP1A6NGW2 1772 aa24.19■■□□□ 1.46
PTPA-220ENST00000436883 ARHGAP23Q9P227 1491 aa24.16■■□□□ 1.46
PTPA-220ENST00000436883 IDI1Q13907 227 aa24.16■■□□□ 1.46
PTPA-220ENST00000436883 SLIT1O75093 1534 aa24.15■■□□□ 1.46
PTPA-220ENST00000436883 PIK3C2BO00750 1634 aa24.14■■□□□ 1.46
PTPA-220ENST00000436883 TMEM2Q9UHN6 1383 aa24.14■■□□□ 1.45
PTPA-220ENST00000436883 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
PTPA-220ENST00000436883 SYNMO15061 1565 aa24.1■■□□□ 1.45
PTPA-220ENST00000436883 MED1Q15648 1581 aaPredicted RBP24.1■■□□□ 1.45
PTPA-220ENST00000436883 LMTK2Q8IWU2 1503 aa24.1■■□□□ 1.45
PTPA-220ENST00000436883 BCANQ96GW7 911 aa24.09■■□□□ 1.45
PTPA-220ENST00000436883 PHF23Q9BUL5 403 aaPredicted RBP24.09■■□□□ 1.45
PTPA-220ENST00000436883 EFCAB6Q5THR3 1501 aa24.08■■□□□ 1.45
PTPA-220ENST00000436883 SLC26A8Q96RN1 970 aa24.07■■□□□ 1.44
PTPA-220ENST00000436883 ADGRL2O95490 1459 aa24.06■■□□□ 1.44
PTPA-220ENST00000436883 ANKRD50Q9ULJ7 1429 aa24.05■■□□□ 1.44
PTPA-220ENST00000436883 SLC52A1Q9NWF4 448 aa24.05■■□□□ 1.44
PTPA-220ENST00000436883 NOS1P29475 1434 aa24.03■■□□□ 1.44
PTPA-220ENST00000436883 KCNA6P17658 529 aa24.02■■□□□ 1.44
PTPA-220ENST00000436883 PROSER2Q86WR7 435 aaPredicted RBP24.02■■□□□ 1.44
PTPA-220ENST00000436883 KDM5AP29375 1690 aaKnown RBP24■■□□□ 1.43
PTPA-220ENST00000436883 RBM33Q96EV2 1170 aaKnown RBP24■■□□□ 1.43
PTPA-220ENST00000436883 TMEM94Q12767 1356 aa23.99■■□□□ 1.43
PTPA-220ENST00000436883 ADGRB3O60242 1522 aa23.97■■□□□ 1.43
PTPA-220ENST00000436883 CHGAP10645 457 aaKnown RBP23.97■■□□□ 1.43
PTPA-220ENST00000436883 XIRP1Q702N8 1843 aaKnown RBP23.97■■□□□ 1.43
PTPA-220ENST00000436883 PPP1R15AO75807 674 aaPredicted RBP23.96■■□□□ 1.43
PTPA-220ENST00000436883 HDGFP51858 240 aaKnown RBP23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms