RNA–Protein interactions for RNA: ENST00000436280.5

GPN1-204, Transcript of GPN-loop GTPase 1, humanhuman

TSL 2

Gene GPN1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-204ENST00000436280 PTPRKQ15262 1439 aa21.71■■□□□ 1.07
GPN1-204ENST00000436280 DUOX2Q9NRD8 1548 aa21.7■■□□□ 1.06
GPN1-204ENST00000436280 DNMT1P26358 1616 aaKnown RBP21.69■■□□□ 1.06
GPN1-204ENST00000436280 DMRT2Q9Y5R5 561 aa21.69■■□□□ 1.06
GPN1-204ENST00000436280 EIF2AK4Q9P2K8 1649 aaKnown RBP21.69■■□□□ 1.06
GPN1-204ENST00000436280 KIF15Q9NS87 1388 aa21.67■■□□□ 1.06
GPN1-204ENST00000436280 RNF17Q9BXT8 1623 aaKnown RBP21.66■■□□□ 1.06
GPN1-204ENST00000436280 ERBINQ96RT1 1412 aa21.64■■□□□ 1.06
GPN1-204ENST00000436280 RRP7BPQ9NSQ0 103 aa21.64■■□□□ 1.05
GPN1-204ENST00000436280 PZPP20742 1482 aa21.64■■□□□ 1.05
GPN1-204ENST00000436280 ANKRD30AQ9BXX3 1397 aa21.63■■□□□ 1.05
GPN1-204ENST00000436280 MYO3AQ8NEV4 1616 aa21.63■■□□□ 1.05
GPN1-204ENST00000436280 FAM50AQ14320 339 aaKnown RBP21.63■■□□□ 1.05
GPN1-204ENST00000436280 STRCQ7RTU9 1775 aa21.62■■□□□ 1.05
GPN1-204ENST00000436280 ZC3H13Q5T200 1668 aaKnown RBP21.61■■□□□ 1.05
GPN1-204ENST00000436280 ILDR1Q86SU0 546 aaPredicted RBP21.61■■□□□ 1.05
GPN1-204ENST00000436280 ZNF142P52746 1687 aaPredicted RBP21.6■■□□□ 1.05
GPN1-204ENST00000436280 CHIC2Q9UKJ5 165 aa21.6■■□□□ 1.05
GPN1-204ENST00000436280 NCOA1Q15788 1441 aa21.6■■□□□ 1.05
GPN1-204ENST00000436280 CEP170BQ9Y4F5 1589 aaPredicted RBP21.6■■□□□ 1.05
GPN1-204ENST00000436280 ABCC3O15438 1527 aa21.6■■□□□ 1.05
GPN1-204ENST00000436280 TNRQ92752 1358 aa21.59■■□□□ 1.05
GPN1-204ENST00000436280 CAMSAP1Q5T5Y3 1602 aa21.58■■□□□ 1.05
GPN1-204ENST00000436280 FBXO31Q5XUX0 539 aaPredicted RBP21.58■■□□□ 1.05
GPN1-204ENST00000436280 PTPRTO14522 1441 aa21.57■■□□□ 1.04
GPN1-204ENST00000436280 MROH1Q8NDA8 1641 aa21.57■■□□□ 1.04
GPN1-204ENST00000436280 A2ML1A8K2U0 1454 aa21.56■■□□□ 1.04
GPN1-204ENST00000436280 ADGRL2O95490 1459 aa21.55■■□□□ 1.04
GPN1-204ENST00000436280 PLA2R1Q13018 1463 aa21.55■■□□□ 1.04
GPN1-204ENST00000436280 CEP152O94986 1710 aa21.55■■□□□ 1.04
GPN1-204ENST00000436280 PRDM15P57071 1507 aaPredicted RBP21.55■■□□□ 1.04
GPN1-204ENST00000436280 KANK1Q14678 1352 aa21.53■■□□□ 1.04
GPN1-204ENST00000436280 PKD2Q13563 968 aa21.52■■□□□ 1.04
GPN1-204ENST00000436280 FBXO41Q8TF61 875 aa21.52■■□□□ 1.04
GPN1-204ENST00000436280 NLRP1Q9C000 1473 aa21.52■■□□□ 1.03
GPN1-204ENST00000436280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.51■■□□□ 1.039e-6■□□□□ 10.7
GPN1-204ENST00000436280 DEPDC5O75140 1603 aa21.5■■□□□ 1.03
GPN1-204ENST00000436280 CFAP65Q6ZU64 1925 aaKnown RBP21.49■■□□□ 1.03
GPN1-204ENST00000436280 PPARGC1BQ86YN6 1023 aaKnown RBP21.49■■□□□ 1.03
GPN1-204ENST00000436280 SPATA31D1Q6ZQQ2 1576 aa21.48■■□□□ 1.03
GPN1-204ENST00000436280 CERKQ8TCT0 537 aa21.48■■□□□ 1.03
GPN1-204ENST00000436280 NCKAP5LQ9HCH0 1330 aa21.48■■□□□ 1.03
GPN1-204ENST00000436280 ARHGAP31Q2M1Z3 1444 aa21.47■■□□□ 1.03
GPN1-204ENST00000436280 ERVK-7P63135 1459 aa21.47■■□□□ 1.03
GPN1-204ENST00000436280 ANKRD50Q9ULJ7 1429 aa21.46■■□□□ 1.03
GPN1-204ENST00000436280 THEMISQ8N1K5 641 aaPredicted RBP21.46■■□□□ 1.03
GPN1-204ENST00000436280 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.46■■□□□ 1.03
GPN1-204ENST00000436280 UGGT1Q9NYU2 1555 aa21.44■■□□□ 1.02
GPN1-204ENST00000436280 ROCK1Q13464 1354 aa21.44■■□□□ 1.02
GPN1-204ENST00000436280 LMTK2Q8IWU2 1503 aa21.43■■□□□ 1.02
GPN1-204ENST00000436280 VWDEQ8N2E2 1590 aa21.41■■□□□ 1.02
GPN1-204ENST00000436280 POLR1AO95602 1720 aaPredicted RBP21.41■■□□□ 1.02
GPN1-204ENST00000436280 ANKLE2Q86XL3 938 aa21.4■■□□□ 1.02
GPN1-204ENST00000436280 ITGAEP38570 1179 aa21.38■■□□□ 1.01
GPN1-204ENST00000436280 EFCAB6Q5THR3 1501 aa21.35■■□□□ 1.01
GPN1-204ENST00000436280 LTBP4Q8N2S1 1624 aa21.35■■□□□ 1.01
GPN1-204ENST00000436280 RRBP1Q9P2E9 1410 aaKnown RBP21.35■■□□□ 1.01
GPN1-204ENST00000436280 NEURL4Q96JN8 1562 aa21.32■■□□□ 1
GPN1-204ENST00000436280 RPRD2Q5VT52 1461 aaKnown RBP21.32■■□□□ 1
GPN1-204ENST00000436280 UNC13BO14795 1591 aa21.31■■□□□ 1
GPN1-204ENST00000436280 ZNF335Q9H4Z2 1342 aaPredicted RBP21.31■■□□□ 1
GPN1-204ENST00000436280 MED14O60244 1454 aa21.31■■□□□ 1
GPN1-204ENST00000436280 IQSEC2Q5JU85 1478 aa21.31■■□□□ 1
GPN1-204ENST00000436280 UBR1Q8IWV7 1749 aa21.3■■□□□ 1
GPN1-204ENST00000436280 STAG3Q9UJ98 1225 aa21.3■■□□□ 1
GPN1-204ENST00000436280 NPHP4O75161 1426 aaPredicted RBP21.29■■□□□ 1
GPN1-204ENST00000436280 NOS1P29475 1434 aa21.29■■□□□ 1
GPN1-204ENST00000436280 TET3O43151 1660 aa21.28■■□□□ 1
GPN1-204ENST00000436280 SLC52A1Q9NWF4 448 aa21.26■□□□□ 0.99
GPN1-204ENST00000436280 PIK3C2BO00750 1634 aa21.26■□□□□ 0.99
GPN1-204ENST00000436280 SLIT1O75093 1534 aa21.25■□□□□ 0.99
GPN1-204ENST00000436280 SYNMO15061 1565 aa21.25■□□□□ 0.99
GPN1-204ENST00000436280 IDI1Q13907 227 aa21.25■□□□□ 0.99
GPN1-204ENST00000436280 EID1Q9Y6B2 187 aa21.25■□□□□ 0.99
GPN1-204ENST00000436280 SCAF11Q99590 1463 aaKnown RBP21.25■□□□□ 0.99
GPN1-204ENST00000436280 KDM5AP29375 1690 aaKnown RBP21.24■□□□□ 0.99
GPN1-204ENST00000436280 IQGAP1P46940 1657 aa21.24■□□□□ 0.99
GPN1-204ENST00000436280 GCC2Q8IWJ2 1684 aa21.24■□□□□ 0.99
GPN1-204ENST00000436280 NUP155O75694 1391 aa21.24■□□□□ 0.99
GPN1-204ENST00000436280 ARHGAP23Q9P227 1491 aa21.24■□□□□ 0.99
GPN1-204ENST00000436280 IQGAP3Q86VI3 1631 aa21.23■□□□□ 0.99
GPN1-204ENST00000436280 TXNDC2Q86VQ3 553 aa21.23■□□□□ 0.99
GPN1-204ENST00000436280 TMEM2Q9UHN6 1383 aa21.22■□□□□ 0.99
GPN1-204ENST00000436280 CPS1P31327 1500 aa21.21■□□□□ 0.99
GPN1-204ENST00000436280 ADGRB3O60242 1522 aa21.19■□□□□ 0.98
GPN1-204ENST00000436280 LTKP29376 864 aa21.19■□□□□ 0.98
GPN1-204ENST00000436280 MYO5BQ9ULV0 1848 aa21.17■□□□□ 0.98
GPN1-204ENST00000436280 E9PCH4 1651 aa21.16■□□□□ 0.98
GPN1-204ENST00000436280 NAIPQ13075 1403 aa21.16■□□□□ 0.98
GPN1-204ENST00000436280 HFM1A2PYH4 1435 aa21.13■□□□□ 0.97
GPN1-204ENST00000436280 UBAP1LF5GYI3 381 aa21.12■□□□□ 0.97
GPN1-204ENST00000436280 HDGFP51858 240 aaKnown RBP21.12■□□□□ 0.97
GPN1-204ENST00000436280 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
GPN1-204ENST00000436280 CHGAP10645 457 aaKnown RBP21.09■□□□□ 0.97
GPN1-204ENST00000436280 TMEM131LA2VDJ0 1609 aa21.08■□□□□ 0.97
GPN1-204ENST00000436280 TOM1O60784 492 aa21.06■□□□□ 0.96
GPN1-204ENST00000436280 PPP1R15AO75807 674 aaPredicted RBP21.06■□□□□ 0.96
GPN1-204ENST00000436280 BCANQ96GW7 911 aa21.06■□□□□ 0.96
GPN1-204ENST00000436280 ZFYVE9O95405 1425 aa21.05■□□□□ 0.96
GPN1-204ENST00000436280 RIMS2Q9UQ26 1411 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms