RNA–Protein interactions for RNA: ENST00000435138.5

SSUH2-207, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 2

Gene SSUH2, Length 2,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-207ENST00000435138 DENND4BO75064 1496 aaPredicted RBP17.32■□□□□ 0.36
SSUH2-207ENST00000435138 AEBP2Q6ZN18 517 aaPredicted RBP17.32■□□□□ 0.36
SSUH2-207ENST00000435138 CDC42BPBQ9Y5S2 1711 aa17.31■□□□□ 0.36
SSUH2-207ENST00000435138 NCOA1Q15788 1441 aa17.31■□□□□ 0.36
SSUH2-207ENST00000435138 DNMT1P26358 1616 aaKnown RBP17.31■□□□□ 0.36
SSUH2-207ENST00000435138 NFKBIBQ15653 356 aa17.3■□□□□ 0.36
SSUH2-207ENST00000435138 NPM1P06748 294 aaKnown RBP eCLIP17.3■□□□□ 0.36
SSUH2-207ENST00000435138 AKNAQ7Z591 1439 aa17.29■□□□□ 0.36
SSUH2-207ENST00000435138 NPM2Q86SE8 214 aaKnown RBP17.29■□□□□ 0.36
SSUH2-207ENST00000435138 SYCP2Q9BX26 1530 aa17.29■□□□□ 0.36
SSUH2-207ENST00000435138 SAMD9LQ8IVG5 1584 aa17.29■□□□□ 0.36
SSUH2-207ENST00000435138 KDM5BQ9UGL1 1544 aa17.29■□□□□ 0.36
SSUH2-207ENST00000435138 NAP1L5Q96NT1 182 aaPredicted RBP17.29■□□□□ 0.36
SSUH2-207ENST00000435138 C9orf84Q5VXU9 1444 aa17.28■□□□□ 0.36
SSUH2-207ENST00000435138 ARHGEF12Q9NZN5 1544 aa17.28■□□□□ 0.36
SSUH2-207ENST00000435138 ASXL2Q76L83 1435 aa17.27■□□□□ 0.36
SSUH2-207ENST00000435138 ITSN2Q9NZM3 1697 aa17.27■□□□□ 0.36
SSUH2-207ENST00000435138 MBD5Q9P267 1494 aa17.26■□□□□ 0.35
SSUH2-207ENST00000435138 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
SSUH2-207ENST00000435138 PKD2Q13563 968 aa17.24■□□□□ 0.35
SSUH2-207ENST00000435138 KIF15Q9NS87 1388 aa17.24■□□□□ 0.35
SSUH2-207ENST00000435138 EFCAB2Q5VUJ9 269 aa17.23■□□□□ 0.35
SSUH2-207ENST00000435138 ANKRD30AQ9BXX3 1397 aa17.23■□□□□ 0.35
SSUH2-207ENST00000435138 TRAPPC8Q9Y2L5 1435 aa17.23■□□□□ 0.35
SSUH2-207ENST00000435138 ZNF326Q5BKZ1 582 aaKnown RBP17.23■□□□□ 0.35
SSUH2-207ENST00000435138 ANKRD50Q9ULJ7 1429 aa17.23■□□□□ 0.35
SSUH2-207ENST00000435138 TAF7LQ5H9L4 462 aa17.22■□□□□ 0.35
SSUH2-207ENST00000435138 TONSLQ96HA7 1378 aa17.22■□□□□ 0.35
SSUH2-207ENST00000435138 NUP155O75694 1391 aa17.22■□□□□ 0.35
SSUH2-207ENST00000435138 WDR7Q9Y4E6 1490 aa17.21■□□□□ 0.35
SSUH2-207ENST00000435138 RGS3P49796 1198 aa17.21■□□□□ 0.35
SSUH2-207ENST00000435138 UHRF1BP1LA0JNW5 1464 aa17.21■□□□□ 0.34
SSUH2-207ENST00000435138 PREX2Q70Z35 1606 aa17.2■□□□□ 0.34
SSUH2-207ENST00000435138 GCC2Q8IWJ2 1684 aa17.2■□□□□ 0.34
SSUH2-207ENST00000435138 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
SSUH2-207ENST00000435138 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
SSUH2-207ENST00000435138 ROCK1Q13464 1354 aa17.19■□□□□ 0.34
SSUH2-207ENST00000435138 L3MBTL2Q969R5 705 aa17.19■□□□□ 0.34
SSUH2-207ENST00000435138 PLCH2O75038 1416 aa17.19■□□□□ 0.34
SSUH2-207ENST00000435138 RAPGEF3O95398 923 aa17.17■□□□□ 0.34
SSUH2-207ENST00000435138 MYO5CQ9NQX4 1742 aa17.16■□□□□ 0.34
SSUH2-207ENST00000435138 CCDC141Q6ZP82 1450 aa17.16■□□□□ 0.34
SSUH2-207ENST00000435138 PZPP20742 1482 aa17.14■□□□□ 0.33
SSUH2-207ENST00000435138 PLEKHH2Q8IVE3 1493 aa17.14■□□□□ 0.33
SSUH2-207ENST00000435138 KDM2AQ9Y2K7 1162 aa17.14■□□□□ 0.33
SSUH2-207ENST00000435138 CROCC2H7BZ55 1655 aa17.13■□□□□ 0.33
SSUH2-207ENST00000435138 CLCN1P35523 988 aa17.13■□□□□ 0.33
SSUH2-207ENST00000435138 PDCL3Q9H2J4 239 aa17.13■□□□□ 0.33
SSUH2-207ENST00000435138 FANCAO15360 1455 aa17.13■□□□□ 0.33
SSUH2-207ENST00000435138 SPAG9O60271 1321 aaKnown RBP17.13■□□□□ 0.33
SSUH2-207ENST00000435138 SCAPERQ9BY12 1400 aa17.12■□□□□ 0.33
SSUH2-207ENST00000435138 RGL3Q3MIN7 710 aa17.12■□□□□ 0.33
SSUH2-207ENST00000435138 PDE4AP27815 886 aa17.12■□□□□ 0.33
SSUH2-207ENST00000435138 KLHL34Q8N239 644 aa17.11■□□□□ 0.33
SSUH2-207ENST00000435138 ANKRD30BQ9BXX2 1392 aa17.11■□□□□ 0.33
SSUH2-207ENST00000435138 NBPF8Q3BBV2 869 aa17.1■□□□□ 0.33
SSUH2-207ENST00000435138 NAP1L2Q9ULW6 460 aaPredicted RBP17.1■□□□□ 0.33
SSUH2-207ENST00000435138 FAM69CQ0P6D2 419 aa17.1■□□□□ 0.33
SSUH2-207ENST00000435138 BBXQ8WY36 941 aaPredicted RBP17.1■□□□□ 0.33
SSUH2-207ENST00000435138 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
SSUH2-207ENST00000435138 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
SSUH2-207ENST00000435138 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
SSUH2-207ENST00000435138 BACH2Q9BYV9 841 aa17.09■□□□□ 0.33
SSUH2-207ENST00000435138 SENP3Q9H4L4 574 aaPredicted RBP17.09■□□□□ 0.33
SSUH2-207ENST00000435138 ADGRL2O95490 1459 aa17.09■□□□□ 0.33
SSUH2-207ENST00000435138 DDRGK1Q96HY6 314 aa17.09■□□□□ 0.33
SSUH2-207ENST00000435138 ADGBQ8N7X0 1667 aa17.08■□□□□ 0.33
SSUH2-207ENST00000435138 CD109Q6YHK3 1445 aa17.08■□□□□ 0.32
SSUH2-207ENST00000435138 TCERG1O14776 1098 aaKnown RBP17.07■□□□□ 0.32
SSUH2-207ENST00000435138 KIF3BO15066 747 aa17.06■□□□□ 0.32
SSUH2-207ENST00000435138 GTF2E1P29083 439 aaPredicted RBP17.06■□□□□ 0.32
SSUH2-207ENST00000435138 ADGRL1O94910 1474 aa17.06■□□□□ 0.32
SSUH2-207ENST00000435138 CNGB1Q14028 1251 aaPredicted RBP17.06■□□□□ 0.32
SSUH2-207ENST00000435138 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
SSUH2-207ENST00000435138 ZBED9Q6R2W3 1325 aa17.04■□□□□ 0.32
SSUH2-207ENST00000435138 ABCC1P33527 1531 aa17.04■□□□□ 0.32
SSUH2-207ENST00000435138 ARHGEF5Q12774 1597 aa17.03■□□□□ 0.32
SSUH2-207ENST00000435138 RSPH4AQ5TD94 716 aa17.02■□□□□ 0.32
SSUH2-207ENST00000435138 GGT6Q6P531 493 aa17.02■□□□□ 0.32
SSUH2-207ENST00000435138 CHMP4BQ9H444 224 aaKnown RBP17.02■□□□□ 0.32
SSUH2-207ENST00000435138 RNF123Q5XPI4 1314 aa17.02■□□□□ 0.31
SSUH2-207ENST00000435138 SHANK2Q9UPX8 1470 aa17.02■□□□□ 0.31
SSUH2-207ENST00000435138 KIAA1107Q9UPP5 1409 aa17.01■□□□□ 0.31
SSUH2-207ENST00000435138 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
SSUH2-207ENST00000435138 STAC3Q96MF2 364 aa16.99■□□□□ 0.31
SSUH2-207ENST00000435138 POLR3GLQ9BT43 218 aa16.99■□□□□ 0.31
SSUH2-207ENST00000435138 ABCA9Q8IUA7 1624 aa16.99■□□□□ 0.31
SSUH2-207ENST00000435138 MS4A1P11836 297 aa16.99■□□□□ 0.31
SSUH2-207ENST00000435138 SLC4A3P48751 1232 aa16.99■□□□□ 0.31
SSUH2-207ENST00000435138 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
SSUH2-207ENST00000435138 TSPOAP1O95153 1857 aa16.98■□□□□ 0.31
SSUH2-207ENST00000435138 HSPA5P11021 654 aaKnown RBP16.98■□□□□ 0.31
SSUH2-207ENST00000435138 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.31
SSUH2-207ENST00000435138 RPRD2Q5VT52 1461 aaKnown RBP16.96■□□□□ 0.31
SSUH2-207ENST00000435138 TPM2P07951 284 aa16.96■□□□□ 0.3
SSUH2-207ENST00000435138 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
SSUH2-207ENST00000435138 CCDC184Q52MB2 194 aa16.95■□□□□ 0.3
SSUH2-207ENST00000435138 IPO4Q8TEX9 1081 aaKnown RBP16.95■□□□□ 0.3
SSUH2-207ENST00000435138 CANXP27824 592 aaKnown RBP16.94■□□□□ 0.3
SSUH2-207ENST00000435138 POGKQ9P215 609 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms