RNA–Protein interactions for RNA: ENST00000434559.1

LINC01878-201, Transcript of long intergenic non-protein coding RNA 1878, humanhuman

TSL 3 BASIC

Gene LINC01878, Length 769 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01878-201ENST00000434559 PCDHGA4Q9Y5G9 962 aa10.76□□□□□ -0.69
LINC01878-201ENST00000434559 MAP3K7O43318 606 aa10.75□□□□□ -0.69
LINC01878-201ENST00000434559 CDAN1Q8IWY9 1227 aa10.74□□□□□ -0.69
LINC01878-201ENST00000434559 NPDC1Q9NQX5 325 aaPredicted RBP10.74□□□□□ -0.69
LINC01878-201ENST00000434559 PCDHGA10Q9Y5H3 936 aa10.74□□□□□ -0.69
LINC01878-201ENST00000434559 TTLL12Q14166 644 aaPredicted RBP10.73□□□□□ -0.69
LINC01878-201ENST00000434559 SLAIN1Q8ND83 568 aa10.73□□□□□ -0.69
LINC01878-201ENST00000434559 CDHR5Q9HBB8 845 aa10.73□□□□□ -0.69
LINC01878-201ENST00000434559 PLEKHG3A1L390 1219 aa10.72□□□□□ -0.69
LINC01878-201ENST00000434559 TYW1BQ6NUM6 668 aa10.72□□□□□ -0.69
LINC01878-201ENST00000434559 FBXW7Q969H0 707 aa10.71□□□□□ -0.69
LINC01878-201ENST00000434559 RBM33Q96EV2 1170 aaKnown RBP10.71□□□□□ -0.69
LINC01878-201ENST00000434559 JPH4Q96JJ6 628 aa10.71□□□□□ -0.69
LINC01878-201ENST00000434559 KDM4FA0A1W2PPD8 638 aa10.7□□□□□ -0.7
LINC01878-201ENST00000434559 TSR1Q2NL82 804 aaKnown RBP10.68□□□□□ -0.7
LINC01878-201ENST00000434559 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
LINC01878-201ENST00000434559 FOSBP53539 338 aa10.66□□□□□ -0.7
LINC01878-201ENST00000434559 CERKQ8TCT0 537 aa10.65□□□□□ -0.7
LINC01878-201ENST00000434559 ARXQ96QS3 562 aa10.65□□□□□ -0.7
LINC01878-201ENST00000434559 GOPCQ9HD26 462 aa10.65□□□□□ -0.7
LINC01878-201ENST00000434559 CLCN1P35523 988 aa10.64□□□□□ -0.71
LINC01878-201ENST00000434559 MS4A1P11836 297 aa10.63□□□□□ -0.71
LINC01878-201ENST00000434559 DOK7Q18PE1 504 aa10.63□□□□□ -0.71
LINC01878-201ENST00000434559 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
LINC01878-201ENST00000434559 REPIN1Q9BWE0 567 aaKnown RBP10.63□□□□□ -0.71
LINC01878-201ENST00000434559 C6orf132Q5T0Z8 1188 aa10.61□□□□□ -0.71
LINC01878-201ENST00000434559 ZNF454Q8N9F8 522 aa10.61□□□□□ -0.71
LINC01878-201ENST00000434559 ZDHHC16Q969W1 377 aa10.61□□□□□ -0.71
LINC01878-201ENST00000434559 PHOX2BQ99453 314 aa10.61□□□□□ -0.71
LINC01878-201ENST00000434559 GPCPD1Q9NPB8 672 aa10.61□□□□□ -0.71
LINC01878-201ENST00000434559 OATP04181 439 aa10.6□□□□□ -0.71
LINC01878-201ENST00000434559 MDM2Q00987 491 aaPredicted RBP10.6□□□□□ -0.71
LINC01878-201ENST00000434559 SUPT5HO00267 1087 aaKnown RBP10.59□□□□□ -0.71
LINC01878-201ENST00000434559 RIMBP2O15034 1052 aa10.59□□□□□ -0.71
LINC01878-201ENST00000434559 NUDT7P0C024 238 aa10.59□□□□□ -0.71
LINC01878-201ENST00000434559 HOXB3P14651 431 aaPredicted RBP10.59□□□□□ -0.71
LINC01878-201ENST00000434559 ZSWIM6Q9HCJ5 1215 aa10.59□□□□□ -0.71
LINC01878-201ENST00000434559 RBM27Q9P2N5 1060 aaKnown RBP10.59□□□□□ -0.71
LINC01878-201ENST00000434559 ST18O60284 1047 aa10.58□□□□□ -0.72
LINC01878-201ENST00000434559 ARSIQ5FYB1 569 aa10.58□□□□□ -0.72
LINC01878-201ENST00000434559 PADI6Q6TGC4 694 aa10.58□□□□□ -0.72
LINC01878-201ENST00000434559 METTL3Q86U44 580 aaKnown RBP10.58□□□□□ -0.72
LINC01878-201ENST00000434559 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
LINC01878-201ENST00000434559 FAM161AQ3B820 660 aa10.56□□□□□ -0.72
LINC01878-201ENST00000434559 KHSRPQ92945 711 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINC01878-201ENST00000434559 PCMTD1Q96MG8 357 aaPredicted RBP10.56□□□□□ -0.72
LINC01878-201ENST00000434559 ADAM33Q9BZ11 813 aa10.56□□□□□ -0.72
LINC01878-201ENST00000434559 ADGRG1Q9Y653 693 aa10.56□□□□□ -0.72
LINC01878-201ENST00000434559 SSTR3P32745 418 aaPredicted RBP10.55□□□□□ -0.72
LINC01878-201ENST00000434559 GPR153Q6NV75 609 aa10.55□□□□□ -0.72
LINC01878-201ENST00000434559 TTC13Q8NBP0 860 aa10.55□□□□□ -0.72
LINC01878-201ENST00000434559 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
LINC01878-201ENST00000434559 FLIIQ13045 1269 aa10.54□□□□□ -0.72
LINC01878-201ENST00000434559 SH3D19Q5HYK7 790 aa10.54□□□□□ -0.72
LINC01878-201ENST00000434559 FAM217BQ9NTX9 383 aaPredicted RBP10.53□□□□□ -0.72
LINC01878-201ENST00000434559 PRSS12P56730 875 aa10.52□□□□□ -0.73
LINC01878-201ENST00000434559 ZNF710Q8N1W2 664 aa10.52□□□□□ -0.73
LINC01878-201ENST00000434559 RSPH6AQ9H0K4 717 aa10.52□□□□□ -0.73
LINC01878-201ENST00000434559 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
LINC01878-201ENST00000434559 CDCA7LQ96GN5 454 aa10.5□□□□□ -0.73
LINC01878-201ENST00000434559 PSDA5PKW4 1024 aaPredicted RBP10.49□□□□□ -0.73
LINC01878-201ENST00000434559 SKIV2LQ15477 1246 aaKnown RBP10.49□□□□□ -0.73
LINC01878-201ENST00000434559 PPP4R3BQ5MIZ7 849 aa10.49□□□□□ -0.73
LINC01878-201ENST00000434559 HOMEZQ8IX15 550 aa10.49□□□□□ -0.73
LINC01878-201ENST00000434559 RBM46Q8TBY0 533 aaKnown RBP10.49□□□□□ -0.73
LINC01878-201ENST00000434559 NLRP7Q8WX94 980 aa10.49□□□□□ -0.73
LINC01878-201ENST00000434559 MMRN1Q13201 1228 aa10.48□□□□□ -0.73
LINC01878-201ENST00000434559 LHX6Q9UPM6 363 aa10.48□□□□□ -0.73
LINC01878-201ENST00000434559 ONECUT3O60422 494 aaPredicted RBP10.47□□□□□ -0.73
LINC01878-201ENST00000434559 BCL2L12Q9HB09 334 aa10.47□□□□□ -0.73
LINC01878-201ENST00000434559 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.44□□□□□ -0.74
LINC01878-201ENST00000434559 COL9A1P20849 921 aa10.44□□□□□ -0.74
LINC01878-201ENST00000434559 SPNS2Q8IVW8 549 aa10.44□□□□□ -0.74
LINC01878-201ENST00000434559 PPP1R3GB7ZBB8 358 aa10.43□□□□□ -0.74
LINC01878-201ENST00000434559 SNPHO15079 494 aa10.43□□□□□ -0.74
LINC01878-201ENST00000434559 FAM198AQ9UFP1 575 aa10.43□□□□□ -0.74
LINC01878-201ENST00000434559 PTPREP23469 700 aa10.42□□□□□ -0.74
LINC01878-201ENST00000434559 MARVELD3Q96A59 401 aa10.42□□□□□ -0.74
LINC01878-201ENST00000434559 EYA1Q99502 592 aa10.42□□□□□ -0.74
LINC01878-201ENST00000434559 RCCD1A6NED2 376 aa10.41□□□□□ -0.74
LINC01878-201ENST00000434559 DIXDC1Q155Q3 683 aa10.41□□□□□ -0.74
LINC01878-201ENST00000434559 MYSM1Q5VVJ2 828 aa10.41□□□□□ -0.74
LINC01878-201ENST00000434559 POLR3EQ9NVU0 708 aa10.41□□□□□ -0.74
LINC01878-201ENST00000434559 PROCA1Q8NCQ7 364 aaPredicted RBP10.4□□□□□ -0.74
LINC01878-201ENST00000434559 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
LINC01878-201ENST00000434559 HOXB1P14653 301 aaPredicted RBP10.39□□□□□ -0.75
LINC01878-201ENST00000434559 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
LINC01878-201ENST00000434559 ATP1B4Q9UN42 357 aaPredicted RBP10.39□□□□□ -0.75
LINC01878-201ENST00000434559 NBPF26B4DH59 902 aa10.38□□□□□ -0.75
LINC01878-201ENST00000434559 CLK2P49760 499 aaKnown RBP10.38□□□□□ -0.75
LINC01878-201ENST00000434559 MCM6Q14566 821 aa10.38□□□□□ -0.75
LINC01878-201ENST00000434559 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.38□□□□□ -0.75
LINC01878-201ENST00000434559 TRIM6-TRIM34B2RNG4 842 aa10.37□□□□□ -0.75
LINC01878-201ENST00000434559 NUDT18Q6ZVK8 323 aa10.37□□□□□ -0.75
LINC01878-201ENST00000434559 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
LINC01878-201ENST00000434559 A6NJR5 290 aa10.36□□□□□ -0.75
LINC01878-201ENST00000434559 DNAJB2P25686 324 aa10.36□□□□□ -0.75
LINC01878-201ENST00000434559 PACS2Q86VP3 889 aa10.36□□□□□ -0.75
LINC01878-201ENST00000434559 CD46P15529 392 aa10.35□□□□□ -0.75
LINC01878-201ENST00000434559 UBTFP17480 764 aaKnown RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms