RNA–Protein interactions for RNA: ENST00000434476.6

SCRN1-207, Transcript of secernin 1, humanhuman

TSL 2 BASIC

Gene SCRN1, Length 1,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN1-207ENST00000434476 TRAPPC8Q9Y2L5 1435 aa18.26■□□□□ 0.51
SCRN1-207ENST00000434476 KDM5CP41229 1560 aa18.26■□□□□ 0.51
SCRN1-207ENST00000434476 DCAF11Q8TEB1 546 aa18.25■□□□□ 0.51
SCRN1-207ENST00000434476 CARD11Q9BXL7 1154 aa18.25■□□□□ 0.51
SCRN1-207ENST00000434476 SPAG9O60271 1321 aaKnown RBP18.24■□□□□ 0.51
SCRN1-207ENST00000434476 PLA2R1Q13018 1463 aa18.24■□□□□ 0.51
SCRN1-207ENST00000434476 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.24■□□□□ 0.513e-8■□□□□ 8.7
SCRN1-207ENST00000434476 ROCK2O75116 1388 aaKnown RBP18.24■□□□□ 0.51
SCRN1-207ENST00000434476 KDM2AQ9Y2K7 1162 aa18.21■□□□□ 0.51
SCRN1-207ENST00000434476 ABCA9Q8IUA7 1624 aa18.2■□□□□ 0.5
SCRN1-207ENST00000434476 OSCARQ8IYS5 282 aa18.2■□□□□ 0.5
SCRN1-207ENST00000434476 PRAG1Q86YV5 1406 aa18.19■□□□□ 0.5
SCRN1-207ENST00000434476 FANCAO15360 1455 aa18.18■□□□□ 0.5
SCRN1-207ENST00000434476 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
SCRN1-207ENST00000434476 AFAP1Q8N556 730 aa18.17■□□□□ 0.5
SCRN1-207ENST00000434476 ZFYVE16Q7Z3T8 1539 aa18.16■□□□□ 0.5
SCRN1-207ENST00000434476 ASXL2Q76L83 1435 aa18.16■□□□□ 0.5
SCRN1-207ENST00000434476 GPRASP1Q5JY77 1395 aa18.15■□□□□ 0.5
SCRN1-207ENST00000434476 DHX29Q7Z478 1369 aaKnown RBP18.15■□□□□ 0.5
SCRN1-207ENST00000434476 NPM1P06748 294 aaKnown RBP eCLIP18.14■□□□□ 0.5
SCRN1-207ENST00000434476 HNRNPUQ00839 825 aaKnown RBP eCLIP18.14■□□□□ 0.5
SCRN1-207ENST00000434476 STAC3Q96MF2 364 aa18.14■□□□□ 0.5
SCRN1-207ENST00000434476 ST20-MTHFSA0A0A6YYL1 179 aa18.14■□□□□ 0.49
SCRN1-207ENST00000434476 A2MP01023 1474 aa18.13■□□□□ 0.49
SCRN1-207ENST00000434476 MRS2Q9HD23 443 aa18.13■□□□□ 0.49
SCRN1-207ENST00000434476 TRPM1Q7Z4N2 1603 aa18.12■□□□□ 0.49
SCRN1-207ENST00000434476 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
SCRN1-207ENST00000434476 LAMC1P11047 1609 aa18.12■□□□□ 0.49
SCRN1-207ENST00000434476 SCAPERQ9BY12 1400 aa18.11■□□□□ 0.49
SCRN1-207ENST00000434476 ATP7AQ04656 1500 aa18.11■□□□□ 0.49
SCRN1-207ENST00000434476 INO80Q9ULG1 1556 aaPredicted RBP18.11■□□□□ 0.49
SCRN1-207ENST00000434476 NEFLP07196 543 aa18.11■□□□□ 0.49
SCRN1-207ENST00000434476 KANK1Q14678 1352 aa18.11■□□□□ 0.49
SCRN1-207ENST00000434476 ADGRL1O94910 1474 aa18.1■□□□□ 0.49
SCRN1-207ENST00000434476 CCDC184Q52MB2 194 aa18.1■□□□□ 0.49
SCRN1-207ENST00000434476 PTPRTO14522 1441 aa18.1■□□□□ 0.49
SCRN1-207ENST00000434476 DEPDC5O75140 1603 aa18.1■□□□□ 0.49
SCRN1-207ENST00000434476 EIF2AK4Q9P2K8 1649 aaKnown RBP18.1■□□□□ 0.49
SCRN1-207ENST00000434476 KTN1Q86UP2 1357 aaKnown RBP18.09■□□□□ 0.49
SCRN1-207ENST00000434476 VWDEQ8N2E2 1590 aa18.07■□□□□ 0.48
SCRN1-207ENST00000434476 FKBP8Q14318 412 aa18.07■□□□□ 0.48
SCRN1-207ENST00000434476 POLR3GLQ9BT43 218 aa18.07■□□□□ 0.48
SCRN1-207ENST00000434476 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
SCRN1-207ENST00000434476 TRPM2O94759 1503 aa18.06■□□□□ 0.48
SCRN1-207ENST00000434476 NBPF1Q3BBV0 1214 aa18.05■□□□□ 0.48
SCRN1-207ENST00000434476 E9PCH4 1651 aa18.04■□□□□ 0.48
SCRN1-207ENST00000434476 TET3O43151 1660 aa18.04■□□□□ 0.48
SCRN1-207ENST00000434476 PRDM15P57071 1507 aaPredicted RBP18.04■□□□□ 0.48
SCRN1-207ENST00000434476 FAM9BQ8IZU0 186 aa18.03■□□□□ 0.48
SCRN1-207ENST00000434476 ZBED9Q6R2W3 1325 aa18.02■□□□□ 0.48
SCRN1-207ENST00000434476 KIF3BO15066 747 aa18.02■□□□□ 0.48
SCRN1-207ENST00000434476 RALBP1Q15311 655 aa18.02■□□□□ 0.48
SCRN1-207ENST00000434476 ZNF518AQ6AHZ1 1483 aa18.02■□□□□ 0.47
SCRN1-207ENST00000434476 NEURL4Q96JN8 1562 aa18.01■□□□□ 0.47
SCRN1-207ENST00000434476 CFAP74Q9C0B2 1584 aa18.01■□□□□ 0.47
SCRN1-207ENST00000434476 MYT1LQ9UL68 1186 aa18.01■□□□□ 0.47
SCRN1-207ENST00000434476 CD109Q6YHK3 1445 aa18■□□□□ 0.47
SCRN1-207ENST00000434476 WASHC2CQ9Y4E1 1318 aa17.99■□□□□ 0.47
SCRN1-207ENST00000434476 TESK2Q96S53 571 aa17.99■□□□□ 0.47
SCRN1-207ENST00000434476 SPHKAPQ2M3C7 1700 aa17.99■□□□□ 0.47
SCRN1-207ENST00000434476 COL17A1Q9UMD9 1497 aaPredicted RBP17.97■□□□□ 0.47
SCRN1-207ENST00000434476 BRD4O60885 1362 aaPredicted RBP17.96■□□□□ 0.47
SCRN1-207ENST00000434476 TMF1P82094 1093 aa17.96■□□□□ 0.47
SCRN1-207ENST00000434476 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
SCRN1-207ENST00000434476 CEP152O94986 1710 aa17.96■□□□□ 0.47
SCRN1-207ENST00000434476 RNF17Q9BXT8 1623 aaKnown RBP17.96■□□□□ 0.47
SCRN1-207ENST00000434476 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
SCRN1-207ENST00000434476 MYBBP1AQ9BQG0 1328 aaKnown RBP17.96■□□□□ 0.47
SCRN1-207ENST00000434476 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.46
SCRN1-207ENST00000434476 MROH1Q8NDA8 1641 aa17.95■□□□□ 0.46
SCRN1-207ENST00000434476 KIDINS220Q9ULH0 1771 aa17.95■□□□□ 0.46
SCRN1-207ENST00000434476 CLTCL1P53675 1640 aa17.95■□□□□ 0.46
SCRN1-207ENST00000434476 TMC1Q8TDI8 760 aa17.95■□□□□ 0.46
SCRN1-207ENST00000434476 PNISRQ8TF01 805 aaKnown RBP17.95■□□□□ 0.46
SCRN1-207ENST00000434476 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
SCRN1-207ENST00000434476 POGZQ7Z3K3 1410 aa17.94■□□□□ 0.46
SCRN1-207ENST00000434476 PER1O15534 1290 aaPredicted RBP17.93■□□□□ 0.46
SCRN1-207ENST00000434476 NEO1Q92859 1461 aa17.92■□□□□ 0.46
SCRN1-207ENST00000434476 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
SCRN1-207ENST00000434476 EFCAB6Q5THR3 1501 aa17.91■□□□□ 0.46
SCRN1-207ENST00000434476 PARD3Q8TEW0 1356 aa17.9■□□□□ 0.46
SCRN1-207ENST00000434476 DISP3Q9P2K9 1392 aa17.9■□□□□ 0.46
SCRN1-207ENST00000434476 SCAF11Q99590 1463 aaKnown RBP17.9■□□□□ 0.46
SCRN1-207ENST00000434476 CDCA8Q53HL2 280 aa17.89■□□□□ 0.45
SCRN1-207ENST00000434476 BCANQ96GW7 911 aa17.89■□□□□ 0.45
SCRN1-207ENST00000434476 LRPPRCP42704 1394 aaKnown RBP17.88■□□□□ 0.45
SCRN1-207ENST00000434476 KIAA1210Q9ULL0 1709 aa17.88■□□□□ 0.45
SCRN1-207ENST00000434476 NLRP13Q86W25 1043 aa17.88■□□□□ 0.45
SCRN1-207ENST00000434476 MYOM2P54296 1465 aa17.87■□□□□ 0.45
SCRN1-207ENST00000434476 IQGAP1P46940 1657 aa17.86■□□□□ 0.45
SCRN1-207ENST00000434476 SMG6Q86US8 1419 aaKnown RBP17.86■□□□□ 0.45
SCRN1-207ENST00000434476 HECW2Q9P2P5 1572 aa17.86■□□□□ 0.45
SCRN1-207ENST00000434476 EIF3AQ14152 1382 aaKnown RBP17.85■□□□□ 0.45
SCRN1-207ENST00000434476 CNGB1Q14028 1251 aaPredicted RBP17.85■□□□□ 0.45
SCRN1-207ENST00000434476 PANK3Q9H999 370 aa17.85■□□□□ 0.45
SCRN1-207ENST00000434476 INSRP06213 1382 aa17.83■□□□□ 0.45
SCRN1-207ENST00000434476 PPRC1Q5VV67 1664 aaKnown RBP17.82■□□□□ 0.44
SCRN1-207ENST00000434476 FRMPD1Q5SYB0 1578 aa17.82■□□□□ 0.44
SCRN1-207ENST00000434476 MAP3K4Q9Y6R4 1608 aa17.81■□□□□ 0.44
SCRN1-207ENST00000434476 TSHZ2Q9NRE2 1034 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms