RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 PLXNC1O60486 1568 aa12.06□□□□□ -0.48
SRGAP3-203ENST00000433332 HNRNPMP52272 730 aaKnown RBP eCLIP12.06□□□□□ -0.48
SRGAP3-203ENST00000433332 DENND4BO75064 1496 aaPredicted RBP12.05□□□□□ -0.48
SRGAP3-203ENST00000433332 TRIM52Q96A61 297 aa12.05□□□□□ -0.48
SRGAP3-203ENST00000433332 ANKRD50Q9ULJ7 1429 aa12.05□□□□□ -0.48
SRGAP3-203ENST00000433332 EFCAB2Q5VUJ9 269 aa12.05□□□□□ -0.48
SRGAP3-203ENST00000433332 ERICH6BQ5W0A0 696 aa12.05□□□□□ -0.48
SRGAP3-203ENST00000433332 KIF15Q9NS87 1388 aa12.04□□□□□ -0.48
SRGAP3-203ENST00000433332 NPM1P06748 294 aaKnown RBP eCLIP12.04□□□□□ -0.48
SRGAP3-203ENST00000433332 TAF7LQ5H9L4 462 aa12.04□□□□□ -0.48
SRGAP3-203ENST00000433332 ARHGEF12Q9NZN5 1544 aa12.03□□□□□ -0.48
SRGAP3-203ENST00000433332 ZNF316A6NFI3 1004 aaPredicted RBP12.03□□□□□ -0.48
SRGAP3-203ENST00000433332 KDM5DQ9BY66 1539 aa12.03□□□□□ -0.48
SRGAP3-203ENST00000433332 RIMBP3CA6NJZ7 1639 aa12.02□□□□□ -0.49
SRGAP3-203ENST00000433332 RIMBP3BA6NNM3 1639 aa12.02□□□□□ -0.49
SRGAP3-203ENST00000433332 RIMBP3Q9UFD9 1639 aa12.02□□□□□ -0.49
SRGAP3-203ENST00000433332 PZPP20742 1482 aa12.02□□□□□ -0.49
SRGAP3-203ENST00000433332 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
SRGAP3-203ENST00000433332 MPHOSPH9Q99550 1183 aa12.02□□□□□ -0.49
SRGAP3-203ENST00000433332 FANCAO15360 1455 aa12.01□□□□□ -0.49
SRGAP3-203ENST00000433332 CFAP74Q9C0B2 1584 aa12.01□□□□□ -0.49
SRGAP3-203ENST00000433332 FGD1P98174 961 aa12.01□□□□□ -0.49
SRGAP3-203ENST00000433332 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
SRGAP3-203ENST00000433332 DHX37Q8IY37 1157 aaKnown RBP11.99□□□□□ -0.49
SRGAP3-203ENST00000433332 TONSLQ96HA7 1378 aa11.99□□□□□ -0.49
SRGAP3-203ENST00000433332 FOXD4L1Q9NU39 408 aa11.99□□□□□ -0.49
SRGAP3-203ENST00000433332 DUOX2Q9NRD8 1548 aa11.99□□□□□ -0.49
SRGAP3-203ENST00000433332 UNC13BO14795 1591 aa11.98□□□□□ -0.49
SRGAP3-203ENST00000433332 ZFYVE16Q7Z3T8 1539 aa11.97□□□□□ -0.49
SRGAP3-203ENST00000433332 TRAPPC8Q9Y2L5 1435 aa11.97□□□□□ -0.49
SRGAP3-203ENST00000433332 PAXIP1Q6ZW49 1069 aaPredicted RBP11.97□□□□□ -0.49
SRGAP3-203ENST00000433332 INO80Q9ULG1 1556 aaPredicted RBP11.96□□□□□ -0.49
SRGAP3-203ENST00000433332 ADGRL1O94910 1474 aa11.96□□□□□ -0.49
SRGAP3-203ENST00000433332 RTEL1-TNFRSF6BF6WH68 1400 aa11.96□□□□□ -0.49
SRGAP3-203ENST00000433332 ERBINQ96RT1 1412 aa11.96□□□□□ -0.49
SRGAP3-203ENST00000433332 ANKRD30BQ9BXX2 1392 aa11.96□□□□□ -0.5
SRGAP3-203ENST00000433332 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
SRGAP3-203ENST00000433332 RPRD2Q5VT52 1461 aaKnown RBP11.94□□□□□ -0.5
SRGAP3-203ENST00000433332 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-203ENST00000433332 NUP155O75694 1391 aa11.94□□□□□ -0.5
SRGAP3-203ENST00000433332 BCL11BQ9C0K0 894 aaPredicted RBP11.94□□□□□ -0.5
SRGAP3-203ENST00000433332 CD109Q6YHK3 1445 aa11.94□□□□□ -0.5
SRGAP3-203ENST00000433332 ATP7AQ04656 1500 aa11.93□□□□□ -0.5
SRGAP3-203ENST00000433332 MAGI2Q86UL8 1455 aa11.93□□□□□ -0.5
SRGAP3-203ENST00000433332 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
SRGAP3-203ENST00000433332 SPAG9O60271 1321 aaKnown RBP11.93□□□□□ -0.5
SRGAP3-203ENST00000433332 PPP1R15AO75807 674 aaPredicted RBP11.92□□□□□ -0.5
SRGAP3-203ENST00000433332 DIEXFQ68CQ4 756 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-203ENST00000433332 PUS7Q96PZ0 661 aaKnown RBP11.92□□□□□ -0.5
SRGAP3-203ENST00000433332 FAM135AQ9P2D6 1515 aa11.92□□□□□ -0.5
SRGAP3-203ENST00000433332 IQGAP3Q86VI3 1631 aa11.92□□□□□ -0.5
SRGAP3-203ENST00000433332 SCAPERQ9BY12 1400 aa11.92□□□□□ -0.5
SRGAP3-203ENST00000433332 GLI2P10070 1586 aa11.91□□□□□ -0.5
SRGAP3-203ENST00000433332 MAP3K4Q9Y6R4 1608 aa11.91□□□□□ -0.5
SRGAP3-203ENST00000433332 ZNF518AQ6AHZ1 1483 aa11.91□□□□□ -0.5
SRGAP3-203ENST00000433332 FOXD1Q16676 465 aa11.91□□□□□ -0.5
SRGAP3-203ENST00000433332 TEX14Q8IWB6 1497 aa11.9□□□□□ -0.5
SRGAP3-203ENST00000433332 NEO1Q92859 1461 aa11.9□□□□□ -0.5
SRGAP3-203ENST00000433332 PKD2Q13563 968 aa11.9□□□□□ -0.51
SRGAP3-203ENST00000433332 CYB5RLQ6IPT4 315 aa11.9□□□□□ -0.51
SRGAP3-203ENST00000433332 TSHZ2Q9NRE2 1034 aa11.9□□□□□ -0.51
SRGAP3-203ENST00000433332 EIF2AK4Q9P2K8 1649 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-203ENST00000433332 ZBTB7CA1YPR0 619 aa11.89□□□□□ -0.51
SRGAP3-203ENST00000433332 KDM5CP41229 1560 aa11.89□□□□□ -0.51
SRGAP3-203ENST00000433332 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
SRGAP3-203ENST00000433332 POGZQ7Z3K3 1410 aa11.88□□□□□ -0.51
SRGAP3-203ENST00000433332 DEPDC5O75140 1603 aa11.88□□□□□ -0.51
SRGAP3-203ENST00000433332 AFAP1Q8N556 730 aa11.88□□□□□ -0.51
SRGAP3-203ENST00000433332 BBXQ8WY36 941 aaPredicted RBP11.87□□□□□ -0.51
SRGAP3-203ENST00000433332 KIDINS220Q9ULH0 1771 aa11.86□□□□□ -0.51
SRGAP3-203ENST00000433332 DIP2BQ9P265 1576 aa11.86□□□□□ -0.51
SRGAP3-203ENST00000433332 HECW2Q9P2P5 1572 aa11.86□□□□□ -0.51
SRGAP3-203ENST00000433332 MYT1LQ9UL68 1186 aa11.86□□□□□ -0.51
SRGAP3-203ENST00000433332 MLH3Q9UHC1 1453 aa11.84□□□□□ -0.51
SRGAP3-203ENST00000433332 PRDM15P57071 1507 aaPredicted RBP11.83□□□□□ -0.52
SRGAP3-203ENST00000433332 L3MBTL2Q969R5 705 aa11.83□□□□□ -0.52
SRGAP3-203ENST00000433332 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
SRGAP3-203ENST00000433332 VWDEQ8N2E2 1590 aa11.82□□□□□ -0.52
SRGAP3-203ENST00000433332 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
SRGAP3-203ENST00000433332 TET3O43151 1660 aa11.81□□□□□ -0.52
SRGAP3-203ENST00000433332 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.81□□□□□ -0.52
SRGAP3-203ENST00000433332 ATP10AO60312 1499 aa11.81□□□□□ -0.52
SRGAP3-203ENST00000433332 RICTORQ6R327 1708 aa11.81□□□□□ -0.52
SRGAP3-203ENST00000433332 MROH1Q8NDA8 1641 aa11.81□□□□□ -0.52
SRGAP3-203ENST00000433332 RNF17Q9BXT8 1623 aaKnown RBP11.81□□□□□ -0.52
SRGAP3-203ENST00000433332 BCORL1Q5H9F3 1711 aa11.8□□□□□ -0.52
SRGAP3-203ENST00000433332 ABCA6Q8N139 1617 aa11.8□□□□□ -0.52
SRGAP3-203ENST00000433332 A2MP01023 1474 aa11.8□□□□□ -0.52
SRGAP3-203ENST00000433332 AAMPQ13685 434 aa11.8□□□□□ -0.52
SRGAP3-203ENST00000433332 KANK1Q14678 1352 aa11.8□□□□□ -0.52
SRGAP3-203ENST00000433332 CCDC144AA2RUR9 1427 aa11.79□□□□□ -0.52
SRGAP3-203ENST00000433332 E9PCH4 1651 aa11.79□□□□□ -0.52
SRGAP3-203ENST00000433332 PLA2R1Q13018 1463 aa11.78□□□□□ -0.52
SRGAP3-203ENST00000433332 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
SRGAP3-203ENST00000433332 PPRC1Q5VV67 1664 aaKnown RBP11.78□□□□□ -0.52
SRGAP3-203ENST00000433332 DIP2CQ9Y2E4 1556 aa11.77□□□□□ -0.53
SRGAP3-203ENST00000433332 UHRF1BP1Q6BDS2 1440 aa11.77□□□□□ -0.53
SRGAP3-203ENST00000433332 TRPM2O94759 1503 aa11.77□□□□□ -0.53
SRGAP3-203ENST00000433332 ZMYM4Q5VZL5 1548 aa11.77□□□□□ -0.53
SRGAP3-203ENST00000433332 NECTIN2Q92692 538 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms