RNA–Protein interactions for RNA: ENST00000432103.6

RTN1-204, Transcript of reticulon 1, humanhuman

TSL 1 (best)

Gene RTN1, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-204ENST00000432103 TIMELESSQ9UNS1 1208 aa20■□□□□ 0.79
RTN1-204ENST00000432103 ABCA6Q8N139 1617 aa19.98■□□□□ 0.79
RTN1-204ENST00000432103 FAM135AQ9P2D6 1515 aa19.98■□□□□ 0.79
RTN1-204ENST00000432103 KIF3BO15066 747 aa19.97■□□□□ 0.79
RTN1-204ENST00000432103 DIP2CQ9Y2E4 1556 aa19.97■□□□□ 0.79
RTN1-204ENST00000432103 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.97■□□□□ 0.79
RTN1-204ENST00000432103 IQGAP3Q86VI3 1631 aa19.97■□□□□ 0.79
RTN1-204ENST00000432103 DEPDC5O75140 1603 aa19.96■□□□□ 0.79
RTN1-204ENST00000432103 PKD2Q13563 968 aa19.95■□□□□ 0.78
RTN1-204ENST00000432103 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
RTN1-204ENST00000432103 BCORL1Q5H9F3 1711 aa19.94■□□□□ 0.78
RTN1-204ENST00000432103 ATP10AO60312 1499 aa19.94■□□□□ 0.78
RTN1-204ENST00000432103 REREQ9P2R6 1566 aa19.92■□□□□ 0.78
RTN1-204ENST00000432103 YEATS2Q9ULM3 1422 aa19.92■□□□□ 0.78
RTN1-204ENST00000432103 PRDM15P57071 1507 aaPredicted RBP19.92■□□□□ 0.78
RTN1-204ENST00000432103 RNF17Q9BXT8 1623 aaKnown RBP19.91■□□□□ 0.78
RTN1-204ENST00000432103 ANKRD30BQ9BXX2 1392 aa19.91■□□□□ 0.78
RTN1-204ENST00000432103 COL17A1Q9UMD9 1497 aaPredicted RBP19.91■□□□□ 0.78
RTN1-204ENST00000432103 NEUROD1Q13562 356 aa19.91■□□□□ 0.78
RTN1-204ENST00000432103 SIN3AQ96ST3 1273 aa19.89■□□□□ 0.77
RTN1-204ENST00000432103 VWDEQ8N2E2 1590 aa19.88■□□□□ 0.77
RTN1-204ENST00000432103 ARHGEF40Q8TER5 1519 aa19.88■□□□□ 0.77
RTN1-204ENST00000432103 TONSLQ96HA7 1378 aa19.88■□□□□ 0.77
RTN1-204ENST00000432103 FOXD1Q16676 465 aa19.87■□□□□ 0.77
RTN1-204ENST00000432103 AGLP35573 1532 aa19.86■□□□□ 0.77
RTN1-204ENST00000432103 MROH1Q8NDA8 1641 aa19.85■□□□□ 0.77
RTN1-204ENST00000432103 LMTK2Q8IWU2 1503 aa19.84■□□□□ 0.77
RTN1-204ENST00000432103 TET3O43151 1660 aa19.84■□□□□ 0.77
RTN1-204ENST00000432103 GGT6Q6P531 493 aa19.84■□□□□ 0.77
RTN1-204ENST00000432103 PPP6R1Q9UPN7 881 aa19.84■□□□□ 0.77
RTN1-204ENST00000432103 RPRD2Q5VT52 1461 aaKnown RBP19.83■□□□□ 0.77
RTN1-204ENST00000432103 WASHC2CQ9Y4E1 1318 aa19.81■□□□□ 0.76
RTN1-204ENST00000432103 ZC3H13Q5T200 1668 aaKnown RBP19.79■□□□□ 0.76
RTN1-204ENST00000432103 CCDC144AA2RUR9 1427 aa19.78■□□□□ 0.76
RTN1-204ENST00000432103 EFCAB6Q5THR3 1501 aa19.77■□□□□ 0.76
RTN1-204ENST00000432103 E9PCH4 1651 aa19.76■□□□□ 0.75
RTN1-204ENST00000432103 ABCC3O15438 1527 aa19.75■□□□□ 0.75
RTN1-204ENST00000432103 PTPRTO14522 1441 aa19.73■□□□□ 0.75
RTN1-204ENST00000432103 CEP152O94986 1710 aa19.73■□□□□ 0.75
RTN1-204ENST00000432103 PPP1R15AO75807 674 aaPredicted RBP19.73■□□□□ 0.75
RTN1-204ENST00000432103 TRPM2O94759 1503 aa19.72■□□□□ 0.75
RTN1-204ENST00000432103 ARHGAP31Q2M1Z3 1444 aa19.72■□□□□ 0.75
RTN1-204ENST00000432103 ESF1Q9H501 851 aaKnown RBP19.71■□□□□ 0.75
RTN1-204ENST00000432103 SPHKAPQ2M3C7 1700 aa19.7■□□□□ 0.74
RTN1-204ENST00000432103 PLA2R1Q13018 1463 aa19.7■□□□□ 0.74
RTN1-204ENST00000432103 CAMSAP1Q5T5Y3 1602 aa19.7■□□□□ 0.74
RTN1-204ENST00000432103 ARID4BQ4LE39 1312 aaPredicted RBP19.7■□□□□ 0.74
RTN1-204ENST00000432103 L3MBTL2Q969R5 705 aa19.68■□□□□ 0.74
RTN1-204ENST00000432103 NPATQ14207 1427 aa19.68■□□□□ 0.74
RTN1-204ENST00000432103 CNTLNQ9NXG0 1405 aa19.68■□□□□ 0.74
RTN1-204ENST00000432103 MLECQ14165 292 aa19.63■□□□□ 0.73
RTN1-204ENST00000432103 STAC3Q96MF2 364 aa19.63■□□□□ 0.73
RTN1-204ENST00000432103 SIGLEC1Q9BZZ2 1709 aa19.62■□□□□ 0.73
RTN1-204ENST00000432103 NEURL4Q96JN8 1562 aa19.62■□□□□ 0.73
RTN1-204ENST00000432103 NOS1P29475 1434 aa19.61■□□□□ 0.73
RTN1-204ENST00000432103 CLTCL1P53675 1640 aa19.59■□□□□ 0.73
RTN1-204ENST00000432103 CLTCQ00610 1675 aaKnown RBP19.59■□□□□ 0.73
RTN1-204ENST00000432103 SLC52A1Q9NWF4 448 aa19.58■□□□□ 0.73
RTN1-204ENST00000432103 DCAF11Q8TEB1 546 aa19.57■□□□□ 0.72
RTN1-204ENST00000432103 SPATA31E1Q6ZUB1 1445 aa19.56■□□□□ 0.72
RTN1-204ENST00000432103 RGL3Q3MIN7 710 aa19.55■□□□□ 0.72
RTN1-204ENST00000432103 UHRF1BP1Q6BDS2 1440 aa19.55■□□□□ 0.72
RTN1-204ENST00000432103 KIF1BO60333 1816 aa19.55■□□□□ 0.72
RTN1-204ENST00000432103 PREX1Q8TCU6 1659 aa19.54■□□□□ 0.72
RTN1-204ENST00000432103 ZMYM3Q14202 1370 aa19.54■□□□□ 0.72
RTN1-204ENST00000432103 ZNF316A6NFI3 1004 aaPredicted RBP19.54■□□□□ 0.72
RTN1-204ENST00000432103 MROH2AA6NES4 1674 aa19.53■□□□□ 0.72
RTN1-204ENST00000432103 ERVK-7P63135 1459 aa19.53■□□□□ 0.72
RTN1-204ENST00000432103 SCAF1Q9H7N4 1312 aaKnown RBP19.51■□□□□ 0.71
RTN1-204ENST00000432103 PIK3C2BO00750 1634 aa19.51■□□□□ 0.71
RTN1-204ENST00000432103 SYNMO15061 1565 aa19.51■□□□□ 0.71
RTN1-204ENST00000432103 SPATA31D1Q6ZQQ2 1576 aa19.51■□□□□ 0.71
RTN1-204ENST00000432103 KDM2AQ9Y2K7 1162 aa19.5■□□□□ 0.71
RTN1-204ENST00000432103 RPGRIP1LQ68CZ1 1315 aa19.5■□□□□ 0.71
RTN1-204ENST00000432103 UGGT1Q9NYU2 1555 aa19.5■□□□□ 0.71
RTN1-204ENST00000432103 ADGRB3O60242 1522 aa19.48■□□□□ 0.71
RTN1-204ENST00000432103 CHGAP10645 457 aaKnown RBP19.48■□□□□ 0.71
RTN1-204ENST00000432103 ZNF326Q5BKZ1 582 aaKnown RBP19.48■□□□□ 0.71
RTN1-204ENST00000432103 CFAP65Q6ZU64 1925 aaKnown RBP19.47■□□□□ 0.71
RTN1-204ENST00000432103 NBPF8Q3BBV2 869 aa19.47■□□□□ 0.71
RTN1-204ENST00000432103 FBXO31Q5XUX0 539 aaPredicted RBP19.46■□□□□ 0.71
RTN1-204ENST00000432103 PRAG1Q86YV5 1406 aa19.46■□□□□ 0.71
RTN1-204ENST00000432103 IDI1Q13907 227 aa19.46■□□□□ 0.71
RTN1-204ENST00000432103 FER1L4A9Z1Z3 1794 aa19.45■□□□□ 0.7
RTN1-204ENST00000432103 RALGAPBQ86X10 1494 aa19.44■□□□□ 0.7
RTN1-204ENST00000432103 MYOM2P54296 1465 aa19.44■□□□□ 0.7
RTN1-204ENST00000432103 STAG3Q9UJ98 1225 aa19.43■□□□□ 0.7
RTN1-204ENST00000432103 EIF4G2P78344 907 aaKnown RBP eCLIP19.43■□□□□ 0.7
RTN1-204ENST00000432103 TNRQ92752 1358 aa19.42■□□□□ 0.7
RTN1-204ENST00000432103 VGFO15240 615 aaPredicted RBP19.4■□□□□ 0.7
RTN1-204ENST00000432103 ROCK2O75116 1388 aaKnown RBP19.39■□□□□ 0.69
RTN1-204ENST00000432103 TMEM131LA2VDJ0 1609 aa19.38■□□□□ 0.69
RTN1-204ENST00000432103 NLRP1Q9C000 1473 aa19.38■□□□□ 0.69
RTN1-204ENST00000432103 IFT172Q9UG01 1749 aa19.38■□□□□ 0.69
RTN1-204ENST00000432103 CARD11Q9BXL7 1154 aa19.37■□□□□ 0.69
RTN1-204ENST00000432103 MADDQ8WXG6 1647 aa19.37■□□□□ 0.69
RTN1-204ENST00000432103 TRPM1Q7Z4N2 1603 aa19.37■□□□□ 0.69
RTN1-204ENST00000432103 C3P01024 1663 aa19.36■□□□□ 0.69
RTN1-204ENST00000432103 HDGFP51858 240 aaKnown RBP19.36■□□□□ 0.69
RTN1-204ENST00000432103 ADAMTSL3P82987 1691 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms