RNA–Protein interactions for RNA: ENST00000431611.5

CSNK1E-208, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 814 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-208ENST00000431611 ARHGEF5Q12774 1597 aa23.96■■□□□ 1.43
CSNK1E-208ENST00000431611 FBXO31Q5XUX0 539 aaPredicted RBP23.96■■□□□ 1.43
CSNK1E-208ENST00000431611 KANK4Q5T7N3 995 aaPredicted RBP23.95■■□□□ 1.42
CSNK1E-208ENST00000431611 TCOF1Q13428 1488 aaKnown RBP23.94■■□□□ 1.42
CSNK1E-208ENST00000431611 KDM5DQ9BY66 1539 aa23.94■■□□□ 1.42
CSNK1E-208ENST00000431611 A2ML1A8K2U0 1454 aa23.94■■□□□ 1.42
CSNK1E-208ENST00000431611 IQSEC2Q5JU85 1478 aa23.94■■□□□ 1.42
CSNK1E-208ENST00000431611 TNRQ92752 1358 aa23.93■■□□□ 1.42
CSNK1E-208ENST00000431611 ZNF335Q9H4Z2 1342 aaPredicted RBP23.93■■□□□ 1.42
CSNK1E-208ENST00000431611 FAM135AQ9P2D6 1515 aa23.92■■□□□ 1.42
CSNK1E-208ENST00000431611 MAP3K1Q13233 1512 aa23.91■■□□□ 1.42
CSNK1E-208ENST00000431611 PZPP20742 1482 aa23.91■■□□□ 1.42
CSNK1E-208ENST00000431611 DNMT1P26358 1616 aaKnown RBP23.88■■□□□ 1.41
CSNK1E-208ENST00000431611 MIA2Q96PC5 1412 aa23.87■■□□□ 1.41
CSNK1E-208ENST00000431611 MYOM3Q5VTT5 1437 aa23.86■■□□□ 1.41
CSNK1E-208ENST00000431611 MAST1Q9Y2H9 1570 aa23.84■■□□□ 1.41
CSNK1E-208ENST00000431611 THEMISQ8N1K5 641 aaPredicted RBP23.83■■□□□ 1.41
CSNK1E-208ENST00000431611 DISP3Q9P2K9 1392 aa23.81■■□□□ 1.4
CSNK1E-208ENST00000431611 UBAP1LF5GYI3 381 aa23.81■■□□□ 1.4
CSNK1E-208ENST00000431611 APLP2Q06481 763 aa23.81■■□□□ 1.4
CSNK1E-208ENST00000431611 NLRP1Q9C000 1473 aa23.81■■□□□ 1.4
CSNK1E-208ENST00000431611 ANKLE2Q86XL3 938 aa23.8■■□□□ 1.4
CSNK1E-208ENST00000431611 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.79■■□□□ 1.48e-8■■■■□ 24.8
CSNK1E-208ENST00000431611 RNF17Q9BXT8 1623 aaKnown RBP23.77■■□□□ 1.4
CSNK1E-208ENST00000431611 ABCC3O15438 1527 aa23.77■■□□□ 1.4
CSNK1E-208ENST00000431611 UGGT1Q9NYU2 1555 aa23.75■■□□□ 1.39
CSNK1E-208ENST00000431611 NEURL4Q96JN8 1562 aa23.74■■□□□ 1.39
CSNK1E-208ENST00000431611 EIF2AK4Q9P2K8 1649 aaKnown RBP23.74■■□□□ 1.39
CSNK1E-208ENST00000431611 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
CSNK1E-208ENST00000431611 ZC3H13Q5T200 1668 aaKnown RBP23.72■■□□□ 1.39
CSNK1E-208ENST00000431611 POLR1AO95602 1720 aaPredicted RBP23.71■■□□□ 1.39
CSNK1E-208ENST00000431611 ABCC5O15440 1437 aa23.71■■□□□ 1.39
CSNK1E-208ENST00000431611 KIF15Q9NS87 1388 aa23.71■■□□□ 1.39
CSNK1E-208ENST00000431611 RRP7BPQ9NSQ0 103 aa23.71■■□□□ 1.39
CSNK1E-208ENST00000431611 SPATA31D1Q6ZQQ2 1576 aa23.7■■□□□ 1.38
CSNK1E-208ENST00000431611 ERVK-7P63135 1459 aa23.7■■□□□ 1.38
CSNK1E-208ENST00000431611 SHANK2Q9UPX8 1470 aa23.7■■□□□ 1.38
CSNK1E-208ENST00000431611 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.38
CSNK1E-208ENST00000431611 NPHP4O75161 1426 aaPredicted RBP23.69■■□□□ 1.38
CSNK1E-208ENST00000431611 CPS1P31327 1500 aa23.69■■□□□ 1.38
CSNK1E-208ENST00000431611 ILDR2Q71H61 639 aa23.68■■□□□ 1.38
CSNK1E-208ENST00000431611 MED14O60244 1454 aa23.68■■□□□ 1.38
CSNK1E-208ENST00000431611 PTPN23Q9H3S7 1636 aa23.66■■□□□ 1.38
CSNK1E-208ENST00000431611 ERBINQ96RT1 1412 aa23.66■■□□□ 1.38
CSNK1E-208ENST00000431611 DEPDC5O75140 1603 aa23.65■■□□□ 1.38
CSNK1E-208ENST00000431611 DAPK1P53355 1430 aa23.65■■□□□ 1.38
CSNK1E-208ENST00000431611 FGD6Q6ZV73 1430 aa23.65■■□□□ 1.38
CSNK1E-208ENST00000431611 TOM1O60784 492 aa23.64■■□□□ 1.37
CSNK1E-208ENST00000431611 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.64■■□□□ 1.375e-9■□□□□ 10.5
CSNK1E-208ENST00000431611 SCAF1Q9H7N4 1312 aaKnown RBP23.62■■□□□ 1.37
CSNK1E-208ENST00000431611 VWDEQ8N2E2 1590 aa23.62■■□□□ 1.37
CSNK1E-208ENST00000431611 ARHGAP31Q2M1Z3 1444 aa23.61■■□□□ 1.37
CSNK1E-208ENST00000431611 PIP4K2BP78356 416 aa23.61■■□□□ 1.37
CSNK1E-208ENST00000431611 CHIC2Q9UKJ5 165 aa23.61■■□□□ 1.37
CSNK1E-208ENST00000431611 CEP152O94986 1710 aa23.61■■□□□ 1.37
CSNK1E-208ENST00000431611 PRDM15P57071 1507 aaPredicted RBP23.6■■□□□ 1.37
CSNK1E-208ENST00000431611 CROCC2H7BZ55 1655 aa23.6■■□□□ 1.37
CSNK1E-208ENST00000431611 KANK1Q14678 1352 aa23.59■■□□□ 1.37
CSNK1E-208ENST00000431611 ANKRD30AQ9BXX3 1397 aa23.59■■□□□ 1.37
CSNK1E-208ENST00000431611 IQGAP1P46940 1657 aa23.57■■□□□ 1.36
CSNK1E-208ENST00000431611 SOCS7O14512 581 aa23.55■■□□□ 1.36
CSNK1E-208ENST00000431611 HSPA1LP34931 641 aa23.55■■□□□ 1.36
CSNK1E-208ENST00000431611 TXNDC2Q86VQ3 553 aa23.55■■□□□ 1.36
CSNK1E-208ENST00000431611 SCAF11Q99590 1463 aaKnown RBP23.54■■□□□ 1.36
CSNK1E-208ENST00000431611 UBR1Q8IWV7 1749 aa23.53■■□□□ 1.36
CSNK1E-208ENST00000431611 LTKP29376 864 aa23.53■■□□□ 1.36
CSNK1E-208ENST00000431611 EID1Q9Y6B2 187 aa23.52■■□□□ 1.36
CSNK1E-208ENST00000431611 ARHGAP23Q9P227 1491 aa23.51■■□□□ 1.35
CSNK1E-208ENST00000431611 STAG3Q9UJ98 1225 aa23.51■■□□□ 1.35
CSNK1E-208ENST00000431611 SLIT1O75093 1534 aa23.5■■□□□ 1.35
CSNK1E-208ENST00000431611 FAM50AQ14320 339 aaKnown RBP23.5■■□□□ 1.35
CSNK1E-208ENST00000431611 CFAP65Q6ZU64 1925 aaKnown RBP23.5■■□□□ 1.35
CSNK1E-208ENST00000431611 LMTK2Q8IWU2 1503 aa23.49■■□□□ 1.35
CSNK1E-208ENST00000431611 LRRC7Q96NW7 1537 aa23.49■■□□□ 1.35
CSNK1E-208ENST00000431611 TMEM2Q9UHN6 1383 aa23.47■■□□□ 1.35
CSNK1E-208ENST00000431611 ADGRL2O95490 1459 aa23.46■■□□□ 1.35
CSNK1E-208ENST00000431611 IDI1Q13907 227 aa23.46■■□□□ 1.35
CSNK1E-208ENST00000431611 PIK3C2BO00750 1634 aa23.44■■□□□ 1.34
CSNK1E-208ENST00000431611 STRCP1A6NGW2 1772 aa23.43■■□□□ 1.34
CSNK1E-208ENST00000431611 ALKQ9UM73 1620 aa23.43■■□□□ 1.34
CSNK1E-208ENST00000431611 SYNMO15061 1565 aa23.42■■□□□ 1.34
CSNK1E-208ENST00000431611 EFCAB6Q5THR3 1501 aa23.41■■□□□ 1.34
CSNK1E-208ENST00000431611 NOS1P29475 1434 aa23.41■■□□□ 1.34
CSNK1E-208ENST00000431611 ANKRD50Q9ULJ7 1429 aa23.41■■□□□ 1.34
CSNK1E-208ENST00000431611 SLC52A1Q9NWF4 448 aa23.39■■□□□ 1.33
CSNK1E-208ENST00000431611 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
CSNK1E-208ENST00000431611 MED1Q15648 1581 aaPredicted RBP23.35■■□□□ 1.33
CSNK1E-208ENST00000431611 KDM5AP29375 1690 aaKnown RBP23.35■■□□□ 1.33
CSNK1E-208ENST00000431611 SLC26A8Q96RN1 970 aa23.34■■□□□ 1.33
CSNK1E-208ENST00000431611 RPRD2Q5VT52 1461 aaKnown RBP23.33■■□□□ 1.33
CSNK1E-208ENST00000431611 KCNA6P17658 529 aa23.32■■□□□ 1.32
CSNK1E-208ENST00000431611 ADGRB3O60242 1522 aa23.32■■□□□ 1.32
CSNK1E-208ENST00000431611 BCANQ96GW7 911 aa23.3■■□□□ 1.32
CSNK1E-208ENST00000431611 TET3O43151 1660 aa23.28■■□□□ 1.32
CSNK1E-208ENST00000431611 TMEM94Q12767 1356 aa23.28■■□□□ 1.32
CSNK1E-208ENST00000431611 PHF23Q9BUL5 403 aaPredicted RBP23.28■■□□□ 1.32
CSNK1E-208ENST00000431611 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
CSNK1E-208ENST00000431611 ROCK1Q13464 1354 aa23.26■■□□□ 1.31
CSNK1E-208ENST00000431611 HDGFP51858 240 aaKnown RBP23.25■■□□□ 1.31
CSNK1E-208ENST00000431611 PPP1R15AO75807 674 aaPredicted RBP23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms