RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 RRP7BPQ9NSQ0 103 aa23.62■■□□□ 1.37
TSPAN9-203ENST00000431374 FAM135AQ9P2D6 1515 aa23.62■■□□□ 1.37
TSPAN9-203ENST00000431374 PREX1Q8TCU6 1659 aa23.6■■□□□ 1.37
TSPAN9-203ENST00000431374 PTPRKQ15262 1439 aa23.6■■□□□ 1.37
TSPAN9-203ENST00000431374 KDM5DQ9BY66 1539 aa23.6■■□□□ 1.37
TSPAN9-203ENST00000431374 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
TSPAN9-203ENST00000431374 ANKRD30AQ9BXX3 1397 aa23.59■■□□□ 1.37
TSPAN9-203ENST00000431374 ERBINQ96RT1 1412 aa23.59■■□□□ 1.37
TSPAN9-203ENST00000431374 WASHC2CQ9Y4E1 1318 aa23.59■■□□□ 1.37
TSPAN9-203ENST00000431374 RNF17Q9BXT8 1623 aaKnown RBP23.58■■□□□ 1.36
TSPAN9-203ENST00000431374 EIF2AK4Q9P2K8 1649 aaKnown RBP23.58■■□□□ 1.36
TSPAN9-203ENST00000431374 NCOA1Q15788 1441 aa23.57■■□□□ 1.36
TSPAN9-203ENST00000431374 ADGRL2O95490 1459 aa23.56■■□□□ 1.36
TSPAN9-203ENST00000431374 SETD1BQ9UPS6 1966 aaKnown RBP23.54■■□□□ 1.36
TSPAN9-203ENST00000431374 PZPP20742 1482 aa23.53■■□□□ 1.36
TSPAN9-203ENST00000431374 ABCC3O15438 1527 aa23.53■■□□□ 1.36
TSPAN9-203ENST00000431374 MROH1Q8NDA8 1641 aa23.52■■□□□ 1.36
TSPAN9-203ENST00000431374 FBXO31Q5XUX0 539 aaPredicted RBP23.5■■□□□ 1.35
TSPAN9-203ENST00000431374 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.5■■□□□ 1.35
TSPAN9-203ENST00000431374 TNRQ92752 1358 aa23.47■■□□□ 1.35
TSPAN9-203ENST00000431374 PRDM15P57071 1507 aaPredicted RBP23.47■■□□□ 1.35
TSPAN9-203ENST00000431374 ZC3H13Q5T200 1668 aaKnown RBP23.44■■□□□ 1.34
TSPAN9-203ENST00000431374 MYO3AQ8NEV4 1616 aa23.44■■□□□ 1.34
TSPAN9-203ENST00000431374 ROCK1Q13464 1354 aa23.44■■□□□ 1.34
TSPAN9-203ENST00000431374 RRBP1Q9P2E9 1410 aaKnown RBP23.43■■□□□ 1.34
TSPAN9-203ENST00000431374 ANKRD50Q9ULJ7 1429 aa23.43■■□□□ 1.34
TSPAN9-203ENST00000431374 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.43■■□□□ 1.34
TSPAN9-203ENST00000431374 CEP170BQ9Y4F5 1589 aaPredicted RBP23.42■■□□□ 1.34
TSPAN9-203ENST00000431374 DEPDC5O75140 1603 aa23.41■■□□□ 1.34
TSPAN9-203ENST00000431374 A2ML1A8K2U0 1454 aa23.41■■□□□ 1.34
TSPAN9-203ENST00000431374 KANK1Q14678 1352 aa23.4■■□□□ 1.34
TSPAN9-203ENST00000431374 ITGAEP38570 1179 aa23.4■■□□□ 1.34
TSPAN9-203ENST00000431374 ARHGAP31Q2M1Z3 1444 aa23.39■■□□□ 1.33
TSPAN9-203ENST00000431374 ZNF142P52746 1687 aaPredicted RBP23.38■■□□□ 1.33
TSPAN9-203ENST00000431374 ERVK-7P63135 1459 aa23.38■■□□□ 1.33
TSPAN9-203ENST00000431374 DMRT2Q9Y5R5 561 aa23.38■■□□□ 1.33
TSPAN9-203ENST00000431374 CAMSAP1Q5T5Y3 1602 aa23.37■■□□□ 1.33
TSPAN9-203ENST00000431374 SPATA31D1Q6ZQQ2 1576 aa23.37■■□□□ 1.33
TSPAN9-203ENST00000431374 LMTK2Q8IWU2 1503 aa23.37■■□□□ 1.33
TSPAN9-203ENST00000431374 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
TSPAN9-203ENST00000431374 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
TSPAN9-203ENST00000431374 STRCQ7RTU9 1775 aa23.36■■□□□ 1.33
TSPAN9-203ENST00000431374 PLA2R1Q13018 1463 aa23.36■■□□□ 1.33
TSPAN9-203ENST00000431374 PTPRTO14522 1441 aa23.34■■□□□ 1.33
TSPAN9-203ENST00000431374 CEP152O94986 1710 aa23.34■■□□□ 1.33
TSPAN9-203ENST00000431374 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
TSPAN9-203ENST00000431374 PKD2Q13563 968 aa23.3■■□□□ 1.32
TSPAN9-203ENST00000431374 EFCAB6Q5THR3 1501 aa23.27■■□□□ 1.32
TSPAN9-203ENST00000431374 THEMISQ8N1K5 641 aaPredicted RBP23.26■■□□□ 1.31
TSPAN9-203ENST00000431374 UGGT1Q9NYU2 1555 aa23.26■■□□□ 1.31
TSPAN9-203ENST00000431374 UNC13BO14795 1591 aa23.25■■□□□ 1.31
TSPAN9-203ENST00000431374 ILDR1Q86SU0 546 aaPredicted RBP23.22■■□□□ 1.31
TSPAN9-203ENST00000431374 NOS1P29475 1434 aa23.22■■□□□ 1.31
TSPAN9-203ENST00000431374 RPRD2Q5VT52 1461 aaKnown RBP23.2■■□□□ 1.3
TSPAN9-203ENST00000431374 NAIPQ13075 1403 aa23.19■■□□□ 1.3
TSPAN9-203ENST00000431374 NUP155O75694 1391 aa23.19■■□□□ 1.3
TSPAN9-203ENST00000431374 ANKLE2Q86XL3 938 aa23.19■■□□□ 1.3
TSPAN9-203ENST00000431374 CERKQ8TCT0 537 aa23.18■■□□□ 1.3
TSPAN9-203ENST00000431374 TET3O43151 1660 aa23.16■■□□□ 1.3
TSPAN9-203ENST00000431374 NEURL4Q96JN8 1562 aa23.16■■□□□ 1.3
TSPAN9-203ENST00000431374 IDI1Q13907 227 aa23.16■■□□□ 1.3
TSPAN9-203ENST00000431374 SYNMO15061 1565 aa23.15■■□□□ 1.3
TSPAN9-203ENST00000431374 FBXO41Q8TF61 875 aa23.15■■□□□ 1.3
TSPAN9-203ENST00000431374 HFM1A2PYH4 1435 aa23.15■■□□□ 1.3
TSPAN9-203ENST00000431374 IQGAP3Q86VI3 1631 aa23.15■■□□□ 1.3
TSPAN9-203ENST00000431374 SLC52A1Q9NWF4 448 aa23.13■■□□□ 1.29
TSPAN9-203ENST00000431374 MED14O60244 1454 aa23.12■■□□□ 1.29
TSPAN9-203ENST00000431374 LTBP4Q8N2S1 1624 aa23.12■■□□□ 1.29
TSPAN9-203ENST00000431374 UBR1Q8IWV7 1749 aa23.12■■□□□ 1.29
TSPAN9-203ENST00000431374 CFAP65Q6ZU64 1925 aaKnown RBP23.12■■□□□ 1.29
TSPAN9-203ENST00000431374 ARHGAP23Q9P227 1491 aa23.11■■□□□ 1.29
TSPAN9-203ENST00000431374 ZNF335Q9H4Z2 1342 aaPredicted RBP23.11■■□□□ 1.29
TSPAN9-203ENST00000431374 NPHP4O75161 1426 aaPredicted RBP23.11■■□□□ 1.29
TSPAN9-203ENST00000431374 SLIT1O75093 1534 aa23.1■■□□□ 1.29
TSPAN9-203ENST00000431374 STAG3Q9UJ98 1225 aa23.1■■□□□ 1.29
TSPAN9-203ENST00000431374 PIK3C2BO00750 1634 aa23.1■■□□□ 1.29
TSPAN9-203ENST00000431374 TMEM2Q9UHN6 1383 aa23.09■■□□□ 1.29
TSPAN9-203ENST00000431374 GCC2Q8IWJ2 1684 aa23.09■■□□□ 1.29
TSPAN9-203ENST00000431374 POLR1AO95602 1720 aaPredicted RBP23.08■■□□□ 1.29
TSPAN9-203ENST00000431374 SCAF11Q99590 1463 aaKnown RBP23.08■■□□□ 1.29
TSPAN9-203ENST00000431374 LTKP29376 864 aa23.07■■□□□ 1.28
TSPAN9-203ENST00000431374 TXNDC2Q86VQ3 553 aa23.06■■□□□ 1.28
TSPAN9-203ENST00000431374 ADGRB3O60242 1522 aa23.06■■□□□ 1.28
TSPAN9-203ENST00000431374 E9PCH4 1651 aa23.05■■□□□ 1.28
TSPAN9-203ENST00000431374 EID1Q9Y6B2 187 aa23.04■■□□□ 1.28
TSPAN9-203ENST00000431374 KDM5AP29375 1690 aaKnown RBP23.03■■□□□ 1.28
TSPAN9-203ENST00000431374 IQGAP1P46940 1657 aa23■■□□□ 1.27
TSPAN9-203ENST00000431374 IQSEC2Q5JU85 1478 aa22.99■■□□□ 1.27
TSPAN9-203ENST00000431374 TRIM52Q96A61 297 aa22.99■■□□□ 1.27
TSPAN9-203ENST00000431374 ZFYVE9O95405 1425 aa22.95■■□□□ 1.26
TSPAN9-203ENST00000431374 TMEM131LA2VDJ0 1609 aa22.94■■□□□ 1.26
TSPAN9-203ENST00000431374 CPS1P31327 1500 aa22.94■■□□□ 1.26
TSPAN9-203ENST00000431374 CHGAP10645 457 aaKnown RBP22.94■■□□□ 1.26
TSPAN9-203ENST00000431374 RIMS2Q9UQ26 1411 aa22.93■■□□□ 1.26
TSPAN9-203ENST00000431374 SLC4A1APQ9BWU0 796 aaKnown RBP22.92■■□□□ 1.26
TSPAN9-203ENST00000431374 HDGFP51858 240 aaKnown RBP22.89■■□□□ 1.25
TSPAN9-203ENST00000431374 TRPM2O94759 1503 aa22.88■■□□□ 1.25
TSPAN9-203ENST00000431374 SETD5Q9C0A6 1442 aa22.88■■□□□ 1.25
TSPAN9-203ENST00000431374 PLEKHG1Q9ULL1 1385 aa22.88■■□□□ 1.25
TSPAN9-203ENST00000431374 PPP1R15AO75807 674 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms