RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 ZNF518AQ6AHZ1 1483 aa10.47□□□□□ -0.73
SMC6-205ENST00000430591 RIMS1Q86UR5 1692 aaKnown RBP10.47□□□□□ -0.73
SMC6-205ENST00000430591 MLECQ14165 292 aa10.46□□□□□ -0.73
SMC6-205ENST00000430591 PPARGC1BQ86YN6 1023 aaKnown RBP10.46□□□□□ -0.73
SMC6-205ENST00000430591 ARID4BQ4LE39 1312 aaPredicted RBP10.46□□□□□ -0.73
SMC6-205ENST00000430591 CAMSAP2Q08AD1 1489 aa10.45□□□□□ -0.74
SMC6-205ENST00000430591 INO80Q9ULG1 1556 aaPredicted RBP10.44□□□□□ -0.74
SMC6-205ENST00000430591 MAP3K1Q13233 1512 aa10.44□□□□□ -0.74
SMC6-205ENST00000430591 ATP10AO60312 1499 aa10.44□□□□□ -0.74
SMC6-205ENST00000430591 MBD5Q9P267 1494 aa10.44□□□□□ -0.74
SMC6-205ENST00000430591 MYT1LQ9UL68 1186 aa10.43□□□□□ -0.74
SMC6-205ENST00000430591 MAGI2Q86UL8 1455 aa10.42□□□□□ -0.74
SMC6-205ENST00000430591 MLH3Q9UHC1 1453 aa10.42□□□□□ -0.74
SMC6-205ENST00000430591 FER1L4A9Z1Z3 1794 aa10.42□□□□□ -0.74
SMC6-205ENST00000430591 ATP7AQ04656 1500 aa10.42□□□□□ -0.74
SMC6-205ENST00000430591 C9orf84Q5VXU9 1444 aa10.41□□□□□ -0.74
SMC6-205ENST00000430591 ADGBQ8N7X0 1667 aa10.41□□□□□ -0.74
SMC6-205ENST00000430591 PTPRMP28827 1452 aa10.41□□□□□ -0.74
SMC6-205ENST00000430591 MYOM3Q5VTT5 1437 aa10.4□□□□□ -0.75
SMC6-205ENST00000430591 KIAA1107Q9UPP5 1409 aa10.4□□□□□ -0.75
SMC6-205ENST00000430591 SPAG9O60271 1321 aaKnown RBP10.39□□□□□ -0.75
SMC6-205ENST00000430591 FKBP8Q14318 412 aa10.39□□□□□ -0.75
SMC6-205ENST00000430591 STAG3Q9UJ98 1225 aa10.39□□□□□ -0.75
SMC6-205ENST00000430591 PTPN23Q9H3S7 1636 aa10.38□□□□□ -0.75
SMC6-205ENST00000430591 HAX1O00165 279 aa10.38□□□□□ -0.75
SMC6-205ENST00000430591 CEBPAP49715 358 aaPredicted RBP10.38□□□□□ -0.75
SMC6-205ENST00000430591 EVX2Q03828 476 aa10.38□□□□□ -0.75
SMC6-205ENST00000430591 CCDC141Q6ZP82 1450 aa10.37□□□□□ -0.75
SMC6-205ENST00000430591 PLEKHH2Q8IVE3 1493 aa10.37□□□□□ -0.75
SMC6-205ENST00000430591 PLXNC1O60486 1568 aa10.37□□□□□ -0.75
SMC6-205ENST00000430591 CREBZFQ9NS37 354 aa10.37□□□□□ -0.75
SMC6-205ENST00000430591 REREQ9P2R6 1566 aa10.37□□□□□ -0.75
SMC6-205ENST00000430591 ARHGEF5Q12774 1597 aa10.36□□□□□ -0.75
SMC6-205ENST00000430591 CROCC2H7BZ55 1655 aa10.35□□□□□ -0.75
SMC6-205ENST00000430591 FGD6Q6ZV73 1430 aa10.35□□□□□ -0.75
SMC6-205ENST00000430591 A2MP01023 1474 aa10.35□□□□□ -0.75
SMC6-205ENST00000430591 C3P01024 1663 aa10.34□□□□□ -0.75
SMC6-205ENST00000430591 AGLP35573 1532 aa10.34□□□□□ -0.75
SMC6-205ENST00000430591 CLTCQ00610 1675 aaKnown RBP10.34□□□□□ -0.75
SMC6-205ENST00000430591 SP7Q8TDD2 431 aaPredicted RBP10.33□□□□□ -0.76
SMC6-205ENST00000430591 ABCC5O15440 1437 aa10.33□□□□□ -0.76
SMC6-205ENST00000430591 MIA2Q96PC5 1412 aa10.33□□□□□ -0.76
SMC6-205ENST00000430591 TCOF1Q13428 1488 aaKnown RBP10.32□□□□□ -0.76
SMC6-205ENST00000430591 FARP1Q9Y4F1 1045 aaPredicted RBP10.32□□□□□ -0.76
SMC6-205ENST00000430591 DNMT1P26358 1616 aaKnown RBP10.32□□□□□ -0.76
SMC6-205ENST00000430591 MAST1Q9Y2H9 1570 aa10.31□□□□□ -0.76
SMC6-205ENST00000430591 C19orf67A6NJJ6 358 aa10.31□□□□□ -0.76
SMC6-205ENST00000430591 LMTK3Q96Q04 1460 aa10.3□□□□□ -0.76
SMC6-205ENST00000430591 HSPA2P54652 639 aa10.3□□□□□ -0.76
SMC6-205ENST00000430591 GGT6Q6P531 493 aa10.3□□□□□ -0.76
SMC6-205ENST00000430591 CHIC2Q9UKJ5 165 aa10.3□□□□□ -0.76
SMC6-205ENST00000430591 RTEL1-TNFRSF6BF6WH68 1400 aa10.3□□□□□ -0.76
SMC6-205ENST00000430591 DAPK1P53355 1430 aa10.3□□□□□ -0.76
SMC6-205ENST00000430591 PTPRKQ15262 1439 aa10.3□□□□□ -0.76
SMC6-205ENST00000430591 MROH1Q8NDA8 1641 aa10.29□□□□□ -0.76
SMC6-205ENST00000430591 DHX29Q7Z478 1369 aaKnown RBP10.28□□□□□ -0.76
SMC6-205ENST00000430591 FAM50AQ14320 339 aaKnown RBP10.28□□□□□ -0.76
SMC6-205ENST00000430591 CEP152O94986 1710 aa10.27□□□□□ -0.76
SMC6-205ENST00000430591 KIF3BO15066 747 aa10.27□□□□□ -0.77
SMC6-205ENST00000430591 RRP7BPQ9NSQ0 103 aa10.27□□□□□ -0.77
SMC6-205ENST00000430591 MROH2AA6NES4 1674 aa10.25□□□□□ -0.77
SMC6-205ENST00000430591 PREX1Q8TCU6 1659 aa10.25□□□□□ -0.77
SMC6-205ENST00000430591 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
SMC6-205ENST00000430591 TSPY4P0CV99 314 aa10.25□□□□□ -0.77
SMC6-205ENST00000430591 TSPY10P0CW01 314 aa10.25□□□□□ -0.77
SMC6-205ENST00000430591 MNX1P50219 401 aaPredicted RBP10.25□□□□□ -0.77
SMC6-205ENST00000430591 SHANK2Q9UPX8 1470 aa10.24□□□□□ -0.77
SMC6-205ENST00000430591 ITGAEP38570 1179 aa10.24□□□□□ -0.77
SMC6-205ENST00000430591 RNF17Q9BXT8 1623 aaKnown RBP10.24□□□□□ -0.77
SMC6-205ENST00000430591 ZMYM3Q14202 1370 aa10.24□□□□□ -0.77
SMC6-205ENST00000430591 KIF15Q9NS87 1388 aa10.24□□□□□ -0.77
SMC6-205ENST00000430591 FBXO31Q5XUX0 539 aaPredicted RBP10.23□□□□□ -0.77
SMC6-205ENST00000430591 DUOX2Q9NRD8 1548 aa10.23□□□□□ -0.77
SMC6-205ENST00000430591 STRCQ7RTU9 1775 aa10.22□□□□□ -0.77
SMC6-205ENST00000430591 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
SMC6-205ENST00000430591 ABCC3O15438 1527 aa10.22□□□□□ -0.77
SMC6-205ENST00000430591 MYO3AQ8NEV4 1616 aa10.22□□□□□ -0.77
SMC6-205ENST00000430591 EIF2AK4Q9P2K8 1649 aaKnown RBP10.22□□□□□ -0.77
SMC6-205ENST00000430591 NCOA1Q15788 1441 aa10.21□□□□□ -0.78
SMC6-205ENST00000430591 KDM5DQ9BY66 1539 aa10.21□□□□□ -0.78
SMC6-205ENST00000430591 ADGRL2O95490 1459 aa10.2□□□□□ -0.78
SMC6-205ENST00000430591 DEPDC5O75140 1603 aa10.19□□□□□ -0.78
SMC6-205ENST00000430591 CAMSAP1Q5T5Y3 1602 aa10.19□□□□□ -0.78
SMC6-205ENST00000430591 CNTLNQ9NXG0 1405 aa10.19□□□□□ -0.78
SMC6-205ENST00000430591 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
SMC6-205ENST00000430591 ESF1Q9H501 851 aaKnown RBP10.19□□□□□ -0.78
SMC6-205ENST00000430591 SETD1BQ9UPS6 1966 aaKnown RBP10.19□□□□□ -0.78
SMC6-205ENST00000430591 PRDM15P57071 1507 aaPredicted RBP10.18□□□□□ -0.78
SMC6-205ENST00000430591 UHRF1BP1Q6BDS2 1440 aa10.17□□□□□ -0.78
SMC6-205ENST00000430591 ZNF142P52746 1687 aaPredicted RBP10.17□□□□□ -0.78
SMC6-205ENST00000430591 ERBINQ96RT1 1412 aa10.16□□□□□ -0.78
SMC6-205ENST00000430591 RRBP1Q9P2E9 1410 aaKnown RBP10.16□□□□□ -0.78
SMC6-205ENST00000430591 ANKRD30AQ9BXX3 1397 aa10.16□□□□□ -0.78
SMC6-205ENST00000430591 WASHC2CQ9Y4E1 1318 aa10.16□□□□□ -0.78
SMC6-205ENST00000430591 VWDEQ8N2E2 1590 aa10.16□□□□□ -0.78
SMC6-205ENST00000430591 CEP170BQ9Y4F5 1589 aaPredicted RBP10.16□□□□□ -0.78
SMC6-205ENST00000430591 PZPP20742 1482 aa10.16□□□□□ -0.78
SMC6-205ENST00000430591 ZC3H13Q5T200 1668 aaKnown RBP10.15□□□□□ -0.78
SMC6-205ENST00000430591 NPATQ14207 1427 aa10.15□□□□□ -0.79
SMC6-205ENST00000430591 ERVK-7P63135 1459 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms