RNA–Protein interactions for RNA: ENST00000430278.5

LMBR1-205, Transcript of limb development membrane protein 1, humanhuman

TSL 4

Gene LMBR1, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-205ENST00000430278 ILDR2Q71H61 639 aa32.94■■■□□ 2.86
LMBR1-205ENST00000430278 FBXO31Q5XUX0 539 aaPredicted RBP32.93■■■□□ 2.86
LMBR1-205ENST00000430278 KDM5DQ9BY66 1539 aa32.91■■■□□ 2.86
LMBR1-205ENST00000430278 TNRQ92752 1358 aa32.9■■■□□ 2.86
LMBR1-205ENST00000430278 FAM135AQ9P2D6 1515 aa32.9■■■□□ 2.86
LMBR1-205ENST00000430278 PZPP20742 1482 aa32.89■■■□□ 2.86
LMBR1-205ENST00000430278 WASHC2CQ9Y4E1 1318 aa32.89■■■□□ 2.86
LMBR1-205ENST00000430278 ARHGEF5Q12774 1597 aa32.88■■■□□ 2.85
LMBR1-205ENST00000430278 UBAP1LF5GYI3 381 aa32.88■■■□□ 2.85
LMBR1-205ENST00000430278 SPATA31D1Q6ZQQ2 1576 aa32.87■■■□□ 2.85
LMBR1-205ENST00000430278 TSPY4P0CV99 314 aa32.86■■■□□ 2.85
LMBR1-205ENST00000430278 TSPY10P0CW01 314 aa32.86■■■□□ 2.85
LMBR1-205ENST00000430278 POLR1AO95602 1720 aaPredicted RBP32.82■■■□□ 2.84
LMBR1-205ENST00000430278 LRRC9Q6ZRR7 1453 aa32.81■■■□□ 2.84
LMBR1-205ENST00000430278 NEURL4Q96JN8 1562 aa32.79■■■□□ 2.84
LMBR1-205ENST00000430278 VPS8Q8N3P4 1428 aa32.79■■■□□ 2.84
LMBR1-205ENST00000430278 MIA2Q96PC5 1412 aa32.78■■■□□ 2.84
LMBR1-205ENST00000430278 SOCS7O14512 581 aa32.78■■■□□ 2.84
LMBR1-205ENST00000430278 NLRP1Q9C000 1473 aa32.75■■■□□ 2.83
LMBR1-205ENST00000430278 THEMISQ8N1K5 641 aaPredicted RBP32.75■■■□□ 2.83
LMBR1-205ENST00000430278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.74■■■□□ 2.834e-7■■■■□ 21.6
LMBR1-205ENST00000430278 ANKLE2Q86XL3 938 aa32.74■■■□□ 2.83
LMBR1-205ENST00000430278 LOC105371045A0A1W2PR82 267 aa32.73■■■□□ 2.83
LMBR1-205ENST00000430278 MAST1Q9Y2H9 1570 aa32.73■■■□□ 2.83
LMBR1-205ENST00000430278 RNF17Q9BXT8 1623 aaKnown RBP32.71■■■□□ 2.83
LMBR1-205ENST00000430278 UGGT1Q9NYU2 1555 aa32.7■■■□□ 2.83
LMBR1-205ENST00000430278 SHANK2Q9UPX8 1470 aa32.7■■■□□ 2.83
LMBR1-205ENST00000430278 KANK4Q5T7N3 995 aaPredicted RBP32.7■■■□□ 2.83
LMBR1-205ENST00000430278 CPS1P31327 1500 aa32.7■■■□□ 2.83
LMBR1-205ENST00000430278 ABCC3O15438 1527 aa32.67■■■□□ 2.82
LMBR1-205ENST00000430278 MAP3K1Q13233 1512 aa32.67■■■□□ 2.82
LMBR1-205ENST00000430278 ZC3H13Q5T200 1668 aaKnown RBP32.66■■■□□ 2.82
LMBR1-205ENST00000430278 EIF2AK4Q9P2K8 1649 aaKnown RBP32.65■■■□□ 2.82
LMBR1-205ENST00000430278 MED14O60244 1454 aa32.64■■■□□ 2.82
LMBR1-205ENST00000430278 MYOM3Q5VTT5 1437 aa32.64■■■□□ 2.82
LMBR1-205ENST00000430278 DEPDC5O75140 1603 aa32.63■■■□□ 2.81
LMBR1-205ENST00000430278 VWDEQ8N2E2 1590 aa32.62■■■□□ 2.81
LMBR1-205ENST00000430278 NPHP4O75161 1426 aaPredicted RBP32.62■■■□□ 2.81
LMBR1-205ENST00000430278 TOM1O60784 492 aa32.61■■■□□ 2.81
LMBR1-205ENST00000430278 MROH1Q8NDA8 1641 aa32.59■■■□□ 2.81
LMBR1-205ENST00000430278 SCAF1Q9H7N4 1312 aaKnown RBP32.58■■■□□ 2.81
LMBR1-205ENST00000430278 PIP4K2BP78356 416 aa32.58■■■□□ 2.81
LMBR1-205ENST00000430278 ERVK-7P63135 1459 aa32.57■■■□□ 2.8
LMBR1-205ENST00000430278 HSPA1LP34931 641 aa32.55■■■□□ 2.8
LMBR1-205ENST00000430278 IQGAP1P46940 1657 aa32.55■■■□□ 2.8
LMBR1-205ENST00000430278 DUOX2Q9NRD8 1548 aa32.55■■■□□ 2.8
LMBR1-205ENST00000430278 CEP152O94986 1710 aa32.53■■■□□ 2.8
LMBR1-205ENST00000430278 CFAP65Q6ZU64 1925 aaKnown RBP32.52■■■□□ 2.8
LMBR1-205ENST00000430278 KIF15Q9NS87 1388 aa32.46■■■□□ 2.79
LMBR1-205ENST00000430278 UBR1Q8IWV7 1749 aa32.46■■■□□ 2.79
LMBR1-205ENST00000430278 STRCP1A6NGW2 1772 aa32.45■■■□□ 2.78
LMBR1-205ENST00000430278 ABCC5O15440 1437 aa32.44■■■□□ 2.78
LMBR1-205ENST00000430278 ALKQ9UM73 1620 aa32.44■■■□□ 2.78
LMBR1-205ENST00000430278 CROCC2H7BZ55 1655 aa32.43■■■□□ 2.78
LMBR1-205ENST00000430278 PRDM15P57071 1507 aaPredicted RBP32.42■■■□□ 2.78
LMBR1-205ENST00000430278 RRP7BPQ9NSQ0 103 aa32.42■■■□□ 2.78
LMBR1-205ENST00000430278 ARHGAP31Q2M1Z3 1444 aa32.42■■■□□ 2.78
LMBR1-205ENST00000430278 ERBINQ96RT1 1412 aa32.42■■■□□ 2.78
LMBR1-205ENST00000430278 PTPN23Q9H3S7 1636 aa32.41■■■□□ 2.78
LMBR1-205ENST00000430278 LRRC7Q96NW7 1537 aa32.41■■■□□ 2.78
LMBR1-205ENST00000430278 APLP2Q06481 763 aa32.39■■■□□ 2.78
LMBR1-205ENST00000430278 MED1Q15648 1581 aaPredicted RBP32.39■■■□□ 2.78
LMBR1-205ENST00000430278 SCAF11Q99590 1463 aaKnown RBP32.38■■■□□ 2.77
LMBR1-205ENST00000430278 LTKP29376 864 aa32.37■■■□□ 2.77
LMBR1-205ENST00000430278 ARHGAP23Q9P227 1491 aa32.36■■■□□ 2.77
LMBR1-205ENST00000430278 SYNMO15061 1565 aa32.36■■■□□ 2.77
LMBR1-205ENST00000430278 SLIT1O75093 1534 aa32.36■■■□□ 2.77
LMBR1-205ENST00000430278 DAPK1P53355 1430 aa32.35■■■□□ 2.77
LMBR1-205ENST00000430278 TXNDC2Q86VQ3 553 aa32.35■■■□□ 2.77
LMBR1-205ENST00000430278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP32.35■■■□□ 2.771e-8■■■□□ 15.2
LMBR1-205ENST00000430278 FGD6Q6ZV73 1430 aa32.31■■■□□ 2.76
LMBR1-205ENST00000430278 KANK1Q14678 1352 aa32.3■■■□□ 2.76
LMBR1-205ENST00000430278 EID1Q9Y6B2 187 aa32.29■■■□□ 2.76
LMBR1-205ENST00000430278 PIK3C2BO00750 1634 aa32.29■■■□□ 2.76
LMBR1-205ENST00000430278 CHIC2Q9UKJ5 165 aa32.26■■■□□ 2.75
LMBR1-205ENST00000430278 ANKRD30AQ9BXX3 1397 aa32.25■■■□□ 2.75
LMBR1-205ENST00000430278 TMEM2Q9UHN6 1383 aa32.24■■■□□ 2.75
LMBR1-205ENST00000430278 LMTK2Q8IWU2 1503 aa32.23■■■□□ 2.75
LMBR1-205ENST00000430278 STAG3Q9UJ98 1225 aa32.23■■■□□ 2.75
LMBR1-205ENST00000430278 SENP3Q9H4L4 574 aaPredicted RBP32.22■■■□□ 2.75
LMBR1-205ENST00000430278 IDI1Q13907 227 aa32.2■■■□□ 2.75
LMBR1-205ENST00000430278 KDM5AP29375 1690 aaKnown RBP32.2■■■□□ 2.74
LMBR1-205ENST00000430278 XIRP1Q702N8 1843 aaKnown RBP32.19■■■□□ 2.74
LMBR1-205ENST00000430278 EFCAB6Q5THR3 1501 aa32.18■■■□□ 2.74
LMBR1-205ENST00000430278 PHF23Q9BUL5 403 aaPredicted RBP32.17■■■□□ 2.74
LMBR1-205ENST00000430278 NOS1P29475 1434 aa32.12■■■□□ 2.73
LMBR1-205ENST00000430278 ADGRL2O95490 1459 aa32.1■■■□□ 2.73
LMBR1-205ENST00000430278 KCNA6P17658 529 aa32.08■■■□□ 2.73
LMBR1-205ENST00000430278 TET3O43151 1660 aa32.08■■■□□ 2.73
LMBR1-205ENST00000430278 SLC26A8Q96RN1 970 aa32.07■■■□□ 2.72
LMBR1-205ENST00000430278 SLC52A1Q9NWF4 448 aa32.06■■■□□ 2.72
LMBR1-205ENST00000430278 ADGRB3O60242 1522 aa32.05■■■□□ 2.72
LMBR1-205ENST00000430278 FAM50AQ14320 339 aaKnown RBP32.05■■■□□ 2.72
LMBR1-205ENST00000430278 TMEM94Q12767 1356 aa32.05■■■□□ 2.72
LMBR1-205ENST00000430278 FAM135BQ49AJ0 1406 aa32.03■■■□□ 2.72
LMBR1-205ENST00000430278 ANKRD50Q9ULJ7 1429 aa32.02■■■□□ 2.72
LMBR1-205ENST00000430278 RPRD2Q5VT52 1461 aaKnown RBP32■■■□□ 2.71
LMBR1-205ENST00000430278 PROSER2Q86WR7 435 aaPredicted RBP32■■■□□ 2.71
LMBR1-205ENST00000430278 RBM33Q96EV2 1170 aaKnown RBP31.96■■■□□ 2.71
LMBR1-205ENST00000430278 BCANQ96GW7 911 aa31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms