RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 DNMT1P26358 1616 aaKnown RBP26.42■■□□□ 1.82
UBE3D-204ENST00000430071 RNF17Q9BXT8 1623 aaKnown RBP26.42■■□□□ 1.82
UBE3D-204ENST00000430071 FBXO31Q5XUX0 539 aaPredicted RBP26.42■■□□□ 1.82
UBE3D-204ENST00000430071 KDM5DQ9BY66 1539 aa26.41■■□□□ 1.82
UBE3D-204ENST00000430071 TCOF1Q13428 1488 aaKnown RBP26.41■■□□□ 1.82
UBE3D-204ENST00000430071 CAMSAP1Q5T5Y3 1602 aa26.4■■□□□ 1.82
UBE3D-204ENST00000430071 MROH1Q8NDA8 1641 aa26.4■■□□□ 1.82
UBE3D-204ENST00000430071 CEP152O94986 1710 aa26.4■■□□□ 1.82
UBE3D-204ENST00000430071 EIF2AK4Q9P2K8 1649 aaKnown RBP26.39■■□□□ 1.81
UBE3D-204ENST00000430071 CEP170BQ9Y4F5 1589 aaPredicted RBP26.38■■□□□ 1.81
UBE3D-204ENST00000430071 DAPK1P53355 1430 aa26.38■■□□□ 1.81
UBE3D-204ENST00000430071 WASHC2CQ9Y4E1 1318 aa26.37■■□□□ 1.81
UBE3D-204ENST00000430071 NCOA1Q15788 1441 aa26.37■■□□□ 1.81
UBE3D-204ENST00000430071 DUOX2Q9NRD8 1548 aa26.35■■□□□ 1.81
UBE3D-204ENST00000430071 SHANK2Q9UPX8 1470 aa26.35■■□□□ 1.81
UBE3D-204ENST00000430071 RRP7BPQ9NSQ0 103 aa26.34■■□□□ 1.81
UBE3D-204ENST00000430071 PZPP20742 1482 aa26.33■■□□□ 1.81
UBE3D-204ENST00000430071 FAM135AQ9P2D6 1515 aa26.33■■□□□ 1.81
UBE3D-204ENST00000430071 FBXO41Q8TF61 875 aa26.33■■□□□ 1.8
UBE3D-204ENST00000430071 CHIC2Q9UKJ5 165 aa26.33■■□□□ 1.8
UBE3D-204ENST00000430071 ABCC3O15438 1527 aa26.32■■□□□ 1.8
UBE3D-204ENST00000430071 KIF15Q9NS87 1388 aa26.32■■□□□ 1.8
UBE3D-204ENST00000430071 NCKAP5LQ9HCH0 1330 aa26.31■■□□□ 1.8
UBE3D-204ENST00000430071 ZC3H13Q5T200 1668 aaKnown RBP26.3■■□□□ 1.8
UBE3D-204ENST00000430071 PTPRTO14522 1441 aa26.29■■□□□ 1.8
UBE3D-204ENST00000430071 DMRT2Q9Y5R5 561 aa26.29■■□□□ 1.8
UBE3D-204ENST00000430071 TNRQ92752 1358 aa26.29■■□□□ 1.8
UBE3D-204ENST00000430071 PPARGC1BQ86YN6 1023 aaKnown RBP26.28■■□□□ 1.8
UBE3D-204ENST00000430071 CERKQ8TCT0 537 aa26.28■■□□□ 1.8
UBE3D-204ENST00000430071 A2ML1A8K2U0 1454 aa26.27■■□□□ 1.8
UBE3D-204ENST00000430071 FAM50AQ14320 339 aaKnown RBP26.26■■□□□ 1.79
UBE3D-204ENST00000430071 DEPDC5O75140 1603 aa26.23■■□□□ 1.79
UBE3D-204ENST00000430071 PRDM15P57071 1507 aaPredicted RBP26.22■■□□□ 1.79
UBE3D-204ENST00000430071 PLA2R1Q13018 1463 aa26.22■■□□□ 1.79
UBE3D-204ENST00000430071 ERBINQ96RT1 1412 aa26.22■■□□□ 1.79
UBE3D-204ENST00000430071 POLR1AO95602 1720 aaPredicted RBP26.2■■□□□ 1.79
UBE3D-204ENST00000430071 LTBP4Q8N2S1 1624 aa26.2■■□□□ 1.78
UBE3D-204ENST00000430071 SPATA31D1Q6ZQQ2 1576 aa26.2■■□□□ 1.78
UBE3D-204ENST00000430071 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.2■■□□□ 1.78
UBE3D-204ENST00000430071 ANKRD30AQ9BXX3 1397 aa26.19■■□□□ 1.78
UBE3D-204ENST00000430071 ADGRL2O95490 1459 aa26.17■■□□□ 1.78
UBE3D-204ENST00000430071 ERVK-7P63135 1459 aa26.17■■□□□ 1.78
UBE3D-204ENST00000430071 NEURL4Q96JN8 1562 aa26.15■■□□□ 1.78
UBE3D-204ENST00000430071 PKD2Q13563 968 aa26.14■■□□□ 1.78
UBE3D-204ENST00000430071 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.13■■□□□ 1.77
UBE3D-204ENST00000430071 NLRP1Q9C000 1473 aa26.13■■□□□ 1.77
UBE3D-204ENST00000430071 UGGT1Q9NYU2 1555 aa26.13■■□□□ 1.77
UBE3D-204ENST00000430071 ZNF335Q9H4Z2 1342 aaPredicted RBP26.12■■□□□ 1.77
UBE3D-204ENST00000430071 VWDEQ8N2E2 1590 aa26.12■■□□□ 1.77
UBE3D-204ENST00000430071 UBR1Q8IWV7 1749 aa26.1■■□□□ 1.77
UBE3D-204ENST00000430071 ARHGAP31Q2M1Z3 1444 aa26.07■■□□□ 1.76
UBE3D-204ENST00000430071 THEMISQ8N1K5 641 aaPredicted RBP26.05■■□□□ 1.76
UBE3D-204ENST00000430071 KANK1Q14678 1352 aa26.04■■□□□ 1.76
UBE3D-204ENST00000430071 ANKRD50Q9ULJ7 1429 aa26.03■■□□□ 1.76
UBE3D-204ENST00000430071 LMTK2Q8IWU2 1503 aa26.03■■□□□ 1.76
UBE3D-204ENST00000430071 PIK3C2BO00750 1634 aa26.02■■□□□ 1.76
UBE3D-204ENST00000430071 ITGAEP38570 1179 aa26.02■■□□□ 1.76
UBE3D-204ENST00000430071 ANKLE2Q86XL3 938 aa26.01■■□□□ 1.75
UBE3D-204ENST00000430071 SYNMO15061 1565 aa26■■□□□ 1.75
UBE3D-204ENST00000430071 EFCAB6Q5THR3 1501 aa25.99■■□□□ 1.75
UBE3D-204ENST00000430071 IQGAP1P46940 1657 aa25.98■■□□□ 1.75
UBE3D-204ENST00000430071 STRCP1A6NGW2 1772 aa25.97■■□□□ 1.75
UBE3D-204ENST00000430071 MYO5BQ9ULV0 1848 aa25.96■■□□□ 1.75
UBE3D-204ENST00000430071 MED14O60244 1454 aa25.96■■□□□ 1.75
UBE3D-204ENST00000430071 UNC13BO14795 1591 aa25.96■■□□□ 1.75
UBE3D-204ENST00000430071 NPHP4O75161 1426 aaPredicted RBP25.95■■□□□ 1.75
UBE3D-204ENST00000430071 TET3O43151 1660 aa25.94■■□□□ 1.74
UBE3D-204ENST00000430071 GCC2Q8IWJ2 1684 aa25.93■■□□□ 1.74
UBE3D-204ENST00000430071 ROCK1Q13464 1354 aa25.92■■□□□ 1.74
UBE3D-204ENST00000430071 NOS1P29475 1434 aa25.92■■□□□ 1.74
UBE3D-204ENST00000430071 LTKP29376 864 aa25.92■■□□□ 1.74
UBE3D-204ENST00000430071 IDI1Q13907 227 aa25.92■■□□□ 1.74
UBE3D-204ENST00000430071 IQSEC2Q5JU85 1478 aa25.91■■□□□ 1.74
UBE3D-204ENST00000430071 ARHGAP23Q9P227 1491 aa25.91■■□□□ 1.74
UBE3D-204ENST00000430071 E9PCH4 1651 aa25.9■■□□□ 1.74
UBE3D-204ENST00000430071 SLIT1O75093 1534 aa25.89■■□□□ 1.74
UBE3D-204ENST00000430071 KDM5AP29375 1690 aaKnown RBP25.87■■□□□ 1.73
UBE3D-204ENST00000430071 SCAF11Q99590 1463 aaKnown RBP25.87■■□□□ 1.73
UBE3D-204ENST00000430071 RRBP1Q9P2E9 1410 aaKnown RBP25.86■■□□□ 1.73
UBE3D-204ENST00000430071 IQGAP3Q86VI3 1631 aa25.86■■□□□ 1.73
UBE3D-204ENST00000430071 TXNDC2Q86VQ3 553 aa25.84■■□□□ 1.73
UBE3D-204ENST00000430071 TMEM2Q9UHN6 1383 aa25.82■■□□□ 1.72
UBE3D-204ENST00000430071 STAG3Q9UJ98 1225 aa25.82■■□□□ 1.72
UBE3D-204ENST00000430071 RPRD2Q5VT52 1461 aaKnown RBP25.81■■□□□ 1.72
UBE3D-204ENST00000430071 ADGRB3O60242 1522 aa25.81■■□□□ 1.72
UBE3D-204ENST00000430071 CPS1P31327 1500 aa25.81■■□□□ 1.72
UBE3D-204ENST00000430071 UBAP1LF5GYI3 381 aa25.8■■□□□ 1.72
UBE3D-204ENST00000430071 NUP155O75694 1391 aa25.78■■□□□ 1.72
UBE3D-204ENST00000430071 XIRP1Q702N8 1843 aaKnown RBP25.78■■□□□ 1.72
UBE3D-204ENST00000430071 TMEM131LA2VDJ0 1609 aa25.76■■□□□ 1.71
UBE3D-204ENST00000430071 SENP3Q9H4L4 574 aaPredicted RBP25.74■■□□□ 1.71
UBE3D-204ENST00000430071 SLC52A1Q9NWF4 448 aa25.74■■□□□ 1.71
UBE3D-204ENST00000430071 EID1Q9Y6B2 187 aa25.74■■□□□ 1.71
UBE3D-204ENST00000430071 ALKQ9UM73 1620 aa25.73■■□□□ 1.71
UBE3D-204ENST00000430071 LRRC7Q96NW7 1537 aa25.72■■□□□ 1.71
UBE3D-204ENST00000430071 NAIPQ13075 1403 aa25.71■■□□□ 1.71
UBE3D-204ENST00000430071 SPHKAPQ2M3C7 1700 aa25.69■■□□□ 1.7
UBE3D-204ENST00000430071 ZFYVE9O95405 1425 aa25.68■■□□□ 1.7
UBE3D-204ENST00000430071 SLC26A8Q96RN1 970 aa25.67■■□□□ 1.7
UBE3D-204ENST00000430071 CHGAP10645 457 aaKnown RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms