RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 KDM5AP29375 1690 aaKnown RBP14.47□□□□□ -0.09
NEDD1-203ENST00000429527 KANK4Q5T7N3 995 aaPredicted RBP14.47□□□□□ -0.09
NEDD1-203ENST00000429527 ABCC5O15440 1437 aa14.46□□□□□ -0.09
NEDD1-203ENST00000429527 DAPK1P53355 1430 aa14.46□□□□□ -0.1
NEDD1-203ENST00000429527 HNRNPMP52272 730 aaKnown RBP eCLIP14.45□□□□□ -0.1
NEDD1-203ENST00000429527 STRCQ7RTU9 1775 aa14.44□□□□□ -0.1
NEDD1-203ENST00000429527 PZPP20742 1482 aa14.44□□□□□ -0.1
NEDD1-203ENST00000429527 PTPRKQ15262 1439 aa14.44□□□□□ -0.1
NEDD1-203ENST00000429527 ZNF644Q9H582 1327 aaPredicted RBP14.44□□□□□ -0.1
NEDD1-203ENST00000429527 SPATA31D1Q6ZQQ2 1576 aa14.43□□□□□ -0.1
NEDD1-203ENST00000429527 CAMSAP1Q5T5Y3 1602 aa14.43□□□□□ -0.1
NEDD1-203ENST00000429527 UNC13BO14795 1591 aa14.43□□□□□ -0.1
NEDD1-203ENST00000429527 ABCC3O15438 1527 aa14.42□□□□□ -0.1
NEDD1-203ENST00000429527 ARHGAP31Q2M1Z3 1444 aa14.42□□□□□ -0.1
NEDD1-203ENST00000429527 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
NEDD1-203ENST00000429527 ROCK1Q13464 1354 aa14.39□□□□□ -0.11
NEDD1-203ENST00000429527 SCAF1Q9H7N4 1312 aaKnown RBP14.38□□□□□ -0.11
NEDD1-203ENST00000429527 CEP170BQ9Y4F5 1589 aaPredicted RBP14.38□□□□□ -0.11
NEDD1-203ENST00000429527 CEP152O94986 1710 aa14.38□□□□□ -0.11
NEDD1-203ENST00000429527 ARID4BQ4LE39 1312 aaPredicted RBP14.37□□□□□ -0.11
NEDD1-203ENST00000429527 GCC2Q8IWJ2 1684 aa14.37□□□□□ -0.11
NEDD1-203ENST00000429527 PTPRTO14522 1441 aa14.37□□□□□ -0.11
NEDD1-203ENST00000429527 UHRF1BP1Q6BDS2 1440 aa14.37□□□□□ -0.11
NEDD1-203ENST00000429527 RRBP1Q9P2E9 1410 aaKnown RBP14.36□□□□□ -0.11
NEDD1-203ENST00000429527 POLR1AO95602 1720 aaPredicted RBP14.36□□□□□ -0.11
NEDD1-203ENST00000429527 ZMYM3Q14202 1370 aa14.36□□□□□ -0.11
NEDD1-203ENST00000429527 A2ML1A8K2U0 1454 aa14.35□□□□□ -0.11
NEDD1-203ENST00000429527 NCOA1Q15788 1441 aa14.35□□□□□ -0.11
NEDD1-203ENST00000429527 ZNF777Q9ULD5 760 aaPredicted RBP14.35□□□□□ -0.11
NEDD1-203ENST00000429527 NLRP1Q9C000 1473 aa14.35□□□□□ -0.11
NEDD1-203ENST00000429527 TET3O43151 1660 aa14.34□□□□□ -0.11
NEDD1-203ENST00000429527 IQGAP3Q86VI3 1631 aa14.33□□□□□ -0.11
NEDD1-203ENST00000429527 IQSEC2Q5JU85 1478 aa14.33□□□□□ -0.12
NEDD1-203ENST00000429527 EFCAB6Q5THR3 1501 aa14.32□□□□□ -0.12
NEDD1-203ENST00000429527 TSPY4P0CV99 314 aa14.31□□□□□ -0.12
NEDD1-203ENST00000429527 TSPY10P0CW01 314 aa14.31□□□□□ -0.12
NEDD1-203ENST00000429527 RPRD2Q5VT52 1461 aaKnown RBP14.31□□□□□ -0.12
NEDD1-203ENST00000429527 ANKRD30AQ9BXX3 1397 aa14.31□□□□□ -0.12
NEDD1-203ENST00000429527 APLP2Q06481 763 aa14.3□□□□□ -0.12
NEDD1-203ENST00000429527 ERVK-7P63135 1459 aa14.3□□□□□ -0.12
NEDD1-203ENST00000429527 KIF15Q9NS87 1388 aa14.3□□□□□ -0.12
NEDD1-203ENST00000429527 UBR1Q8IWV7 1749 aa14.3□□□□□ -0.12
NEDD1-203ENST00000429527 CLSPNQ9HAW4 1339 aa14.3□□□□□ -0.12
NEDD1-203ENST00000429527 PIK3C2BO00750 1634 aa14.29□□□□□ -0.12
NEDD1-203ENST00000429527 MED14O60244 1454 aa14.28□□□□□ -0.12
NEDD1-203ENST00000429527 NEURL4Q96JN8 1562 aa14.28□□□□□ -0.12
NEDD1-203ENST00000429527 ACIN1Q9UKV3 1341 aaKnown RBP14.27□□□□□ -0.12
NEDD1-203ENST00000429527 SLIT1O75093 1534 aa14.26□□□□□ -0.13
NEDD1-203ENST00000429527 ARHGAP23Q9P227 1491 aa14.25□□□□□ -0.13
NEDD1-203ENST00000429527 NOS1P29475 1434 aa14.24□□□□□ -0.13
NEDD1-203ENST00000429527 LTBP4Q8N2S1 1624 aa14.24□□□□□ -0.13
NEDD1-203ENST00000429527 SYNMO15061 1565 aa14.24□□□□□ -0.13
NEDD1-203ENST00000429527 TNRQ92752 1358 aa14.23□□□□□ -0.13
NEDD1-203ENST00000429527 UGGT1Q9NYU2 1555 aa14.22□□□□□ -0.13
NEDD1-203ENST00000429527 E9PCH4 1651 aa14.21□□□□□ -0.13
NEDD1-203ENST00000429527 MLECQ14165 292 aa14.2□□□□□ -0.14
NEDD1-203ENST00000429527 ANKRD50Q9ULJ7 1429 aa14.2□□□□□ -0.14
NEDD1-203ENST00000429527 ADGRB3O60242 1522 aa14.19□□□□□ -0.14
NEDD1-203ENST00000429527 KIF3BO15066 747 aa14.19□□□□□ -0.14
NEDD1-203ENST00000429527 DMRT2Q9Y5R5 561 aa14.19□□□□□ -0.14
NEDD1-203ENST00000429527 CCER1Q8TC90 406 aaPredicted RBP14.19□□□□□ -0.14
NEDD1-203ENST00000429527 MYT1LQ9UL68 1186 aa14.19□□□□□ -0.14
NEDD1-203ENST00000429527 IQGAP1P46940 1657 aa14.18□□□□□ -0.14
NEDD1-203ENST00000429527 ESF1Q9H501 851 aaKnown RBP14.18□□□□□ -0.14
NEDD1-203ENST00000429527 PKD2Q13563 968 aa14.17□□□□□ -0.14
NEDD1-203ENST00000429527 CEBPAP49715 358 aaPredicted RBP14.17□□□□□ -0.14
NEDD1-203ENST00000429527 KANK1Q14678 1352 aa14.17□□□□□ -0.14
NEDD1-203ENST00000429527 SPHKAPQ2M3C7 1700 aa14.15□□□□□ -0.14
NEDD1-203ENST00000429527 TMEM131LA2VDJ0 1609 aa14.15□□□□□ -0.14
NEDD1-203ENST00000429527 DIEXFQ68CQ4 756 aaKnown RBP14.14□□□□□ -0.15
NEDD1-203ENST00000429527 WASHC2CQ9Y4E1 1318 aa14.14□□□□□ -0.15
NEDD1-203ENST00000429527 CPS1P31327 1500 aa14.14□□□□□ -0.15
NEDD1-203ENST00000429527 HFM1A2PYH4 1435 aa14.14□□□□□ -0.15
NEDD1-203ENST00000429527 ZNF316A6NFI3 1004 aaPredicted RBP14.13□□□□□ -0.15
NEDD1-203ENST00000429527 GGT6Q6P531 493 aa14.13□□□□□ -0.15
NEDD1-203ENST00000429527 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
NEDD1-203ENST00000429527 NAIPQ13075 1403 aa14.11□□□□□ -0.15
NEDD1-203ENST00000429527 DIP2AQ14689 1571 aa14.1□□□□□ -0.15
NEDD1-203ENST00000429527 NEUROD1Q13562 356 aa14.09□□□□□ -0.15
NEDD1-203ENST00000429527 TRPM2O94759 1503 aa14.09□□□□□ -0.15
NEDD1-203ENST00000429527 CENPBP07199 599 aaPredicted RBP14.08□□□□□ -0.16
NEDD1-203ENST00000429527 RRP7BPQ9NSQ0 103 aa14.08□□□□□ -0.16
NEDD1-203ENST00000429527 STRCP1A6NGW2 1772 aa14.07□□□□□ -0.16
NEDD1-203ENST00000429527 MYO5BQ9ULV0 1848 aa14.07□□□□□ -0.16
NEDD1-203ENST00000429527 ZFYVE9O95405 1425 aa14.07□□□□□ -0.16
NEDD1-203ENST00000429527 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
NEDD1-203ENST00000429527 HSPA2P54652 639 aa14.06□□□□□ -0.16
NEDD1-203ENST00000429527 NPHP4O75161 1426 aaPredicted RBP14.05□□□□□ -0.16
NEDD1-203ENST00000429527 DHX57Q6P158 1386 aaKnown RBP14.04□□□□□ -0.16
NEDD1-203ENST00000429527 FBXO31Q5XUX0 539 aaPredicted RBP14.04□□□□□ -0.16
NEDD1-203ENST00000429527 THEMISQ8N1K5 641 aaPredicted RBP14.04□□□□□ -0.16
NEDD1-203ENST00000429527 XIRP1Q702N8 1843 aaKnown RBP14.03□□□□□ -0.16
NEDD1-203ENST00000429527 SLC52A1Q9NWF4 448 aa14.03□□□□□ -0.16
NEDD1-203ENST00000429527 FBXO41Q8TF61 875 aa14.02□□□□□ -0.16
NEDD1-203ENST00000429527 TMEM2Q9UHN6 1383 aa14.02□□□□□ -0.17
NEDD1-203ENST00000429527 FAM50AQ14320 339 aaKnown RBP14.02□□□□□ -0.17
NEDD1-203ENST00000429527 SETBP1Q9Y6X0 1596 aa14.01□□□□□ -0.17
NEDD1-203ENST00000429527 IFT172Q9UG01 1749 aa14.01□□□□□ -0.17
NEDD1-203ENST00000429527 CLTCL1P53675 1640 aa14.01□□□□□ -0.17
NEDD1-203ENST00000429527 PRAG1Q86YV5 1406 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms