RNA–Protein interactions for RNA: ENST00000429427.1

SSR4P1-202, Transcript of signal sequence receptor subunit 4 pseudogene 1, humanhuman

TSL 5 BASIC

Gene SSR4P1, Length 967 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4P1-202ENST00000429427 KDM5DQ9BY66 1539 aa28.12■■■□□ 2.09
SSR4P1-202ENST00000429427 DUOX2Q9NRD8 1548 aa28.11■■■□□ 2.09
SSR4P1-202ENST00000429427 KIF15Q9NS87 1388 aa28.11■■■□□ 2.09
SSR4P1-202ENST00000429427 MROH1Q8NDA8 1641 aa28.1■■■□□ 2.09
SSR4P1-202ENST00000429427 EIF2AK4Q9P2K8 1649 aaKnown RBP28.1■■■□□ 2.09
SSR4P1-202ENST00000429427 FAM135AQ9P2D6 1515 aa28.09■■■□□ 2.09
SSR4P1-202ENST00000429427 PPARGC1BQ86YN6 1023 aaKnown RBP28.08■■■□□ 2.09
SSR4P1-202ENST00000429427 RRP7BPQ9NSQ0 103 aa28.06■■■□□ 2.08
SSR4P1-202ENST00000429427 FAM50AQ14320 339 aaKnown RBP28.04■■■□□ 2.08
SSR4P1-202ENST00000429427 CHIC2Q9UKJ5 165 aa28.04■■■□□ 2.08
SSR4P1-202ENST00000429427 ABCC3O15438 1527 aa28.03■■■□□ 2.08
SSR4P1-202ENST00000429427 MYO3AQ8NEV4 1616 aa28.03■■■□□ 2.08
SSR4P1-202ENST00000429427 NCOA1Q15788 1441 aa28.02■■■□□ 2.08
SSR4P1-202ENST00000429427 ERBINQ96RT1 1412 aa28.02■■■□□ 2.08
SSR4P1-202ENST00000429427 STRCQ7RTU9 1775 aa28.02■■■□□ 2.08
SSR4P1-202ENST00000429427 WASHC2CQ9Y4E1 1318 aa28.02■■■□□ 2.08
SSR4P1-202ENST00000429427 ADGRL2O95490 1459 aa28.02■■■□□ 2.08
SSR4P1-202ENST00000429427 PZPP20742 1482 aa28.02■■■□□ 2.08
SSR4P1-202ENST00000429427 FBXO31Q5XUX0 539 aaPredicted RBP28■■■□□ 2.07
SSR4P1-202ENST00000429427 ANKRD30AQ9BXX3 1397 aa27.99■■■□□ 2.07
SSR4P1-202ENST00000429427 PRDM15P57071 1507 aaPredicted RBP27.98■■■□□ 2.07
SSR4P1-202ENST00000429427 ZNF142P52746 1687 aaPredicted RBP27.97■■■□□ 2.07
SSR4P1-202ENST00000429427 ZC3H13Q5T200 1668 aaKnown RBP27.97■■■□□ 2.07
SSR4P1-202ENST00000429427 DEPDC5O75140 1603 aa27.96■■■□□ 2.07
SSR4P1-202ENST00000429427 CEP170BQ9Y4F5 1589 aaPredicted RBP27.95■■■□□ 2.07
SSR4P1-202ENST00000429427 CEP152O94986 1710 aa27.93■■■□□ 2.06
SSR4P1-202ENST00000429427 TNRQ92752 1358 aa27.91■■■□□ 2.06
SSR4P1-202ENST00000429427 CAMSAP1Q5T5Y3 1602 aa27.91■■■□□ 2.06
SSR4P1-202ENST00000429427 A2ML1A8K2U0 1454 aa27.89■■■□□ 2.05
SSR4P1-202ENST00000429427 VWDEQ8N2E2 1590 aa27.87■■■□□ 2.05
SSR4P1-202ENST00000429427 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.86■■■□□ 2.05
SSR4P1-202ENST00000429427 SPATA31D1Q6ZQQ2 1576 aa27.86■■■□□ 2.05
SSR4P1-202ENST00000429427 ERVK-7P63135 1459 aa27.85■■■□□ 2.05
SSR4P1-202ENST00000429427 ANKRD50Q9ULJ7 1429 aa27.84■■■□□ 2.05
SSR4P1-202ENST00000429427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.83■■■□□ 2.05
SSR4P1-202ENST00000429427 RRBP1Q9P2E9 1410 aaKnown RBP27.83■■■□□ 2.05
SSR4P1-202ENST00000429427 PLA2R1Q13018 1463 aa27.83■■■□□ 2.04
SSR4P1-202ENST00000429427 ARHGAP31Q2M1Z3 1444 aa27.82■■■□□ 2.04
SSR4P1-202ENST00000429427 ROCK1Q13464 1354 aa27.81■■■□□ 2.04
SSR4P1-202ENST00000429427 PTPRTO14522 1441 aa27.81■■■□□ 2.04
SSR4P1-202ENST00000429427 LMTK2Q8IWU2 1503 aa27.81■■■□□ 2.04
SSR4P1-202ENST00000429427 NLRP1Q9C000 1473 aa27.79■■■□□ 2.04
SSR4P1-202ENST00000429427 NCKAP5LQ9HCH0 1330 aa27.78■■■□□ 2.04
SSR4P1-202ENST00000429427 ILDR1Q86SU0 546 aaPredicted RBP27.78■■■□□ 2.04
SSR4P1-202ENST00000429427 ITGAEP38570 1179 aa27.76■■■□□ 2.03
SSR4P1-202ENST00000429427 DMRT2Q9Y5R5 561 aa27.76■■■□□ 2.03
SSR4P1-202ENST00000429427 KANK1Q14678 1352 aa27.74■■■□□ 2.03
SSR4P1-202ENST00000429427 EFCAB6Q5THR3 1501 aa27.72■■■□□ 2.03
SSR4P1-202ENST00000429427 CFAP65Q6ZU64 1925 aaKnown RBP27.72■■■□□ 2.03
SSR4P1-202ENST00000429427 UGGT1Q9NYU2 1555 aa27.72■■■□□ 2.03
SSR4P1-202ENST00000429427 UNC13BO14795 1591 aa27.71■■■□□ 2.03
SSR4P1-202ENST00000429427 NEURL4Q96JN8 1562 aa27.69■■■□□ 2.02
SSR4P1-202ENST00000429427 PKD2Q13563 968 aa27.68■■■□□ 2.02
SSR4P1-202ENST00000429427 LTBP4Q8N2S1 1624 aa27.66■■■□□ 2.02
SSR4P1-202ENST00000429427 SYNMO15061 1565 aa27.65■■■□□ 2.02
SSR4P1-202ENST00000429427 UBR1Q8IWV7 1749 aa27.64■■■□□ 2.02
SSR4P1-202ENST00000429427 CERKQ8TCT0 537 aa27.64■■■□□ 2.02
SSR4P1-202ENST00000429427 NOS1P29475 1434 aa27.64■■■□□ 2.02
SSR4P1-202ENST00000429427 POLR1AO95602 1720 aaPredicted RBP27.64■■■□□ 2.01
SSR4P1-202ENST00000429427 THEMISQ8N1K5 641 aaPredicted RBP27.62■■■□□ 2.01
SSR4P1-202ENST00000429427 TET3O43151 1660 aa27.62■■■□□ 2.01
SSR4P1-202ENST00000429427 FBXO41Q8TF61 875 aa27.6■■■□□ 2.01
SSR4P1-202ENST00000429427 PIK3C2BO00750 1634 aa27.59■■■□□ 2.01
SSR4P1-202ENST00000429427 IQGAP3Q86VI3 1631 aa27.59■■■□□ 2.01
SSR4P1-202ENST00000429427 RPRD2Q5VT52 1461 aaKnown RBP27.57■■■□□ 2
SSR4P1-202ENST00000429427 ZNF335Q9H4Z2 1342 aaPredicted RBP27.57■■■□□ 2
SSR4P1-202ENST00000429427 NAIPQ13075 1403 aa27.57■■■□□ 2
SSR4P1-202ENST00000429427 MED14O60244 1454 aa27.57■■■□□ 2
SSR4P1-202ENST00000429427 GCC2Q8IWJ2 1684 aa27.56■■■□□ 2
SSR4P1-202ENST00000429427 ARHGAP23Q9P227 1491 aa27.56■■■□□ 2
SSR4P1-202ENST00000429427 ANKLE2Q86XL3 938 aa27.55■■■□□ 2
SSR4P1-202ENST00000429427 E9PCH4 1651 aa27.54■■■□□ 2
SSR4P1-202ENST00000429427 IDI1Q13907 227 aa27.54■■■□□ 2
SSR4P1-202ENST00000429427 SLIT1O75093 1534 aa27.53■■■□□ 2
SSR4P1-202ENST00000429427 NUP155O75694 1391 aa27.53■■■□□ 2
SSR4P1-202ENST00000429427 NPHP4O75161 1426 aaPredicted RBP27.51■■□□□ 1.99
SSR4P1-202ENST00000429427 KDM5AP29375 1690 aaKnown RBP27.49■■□□□ 1.99
SSR4P1-202ENST00000429427 LTKP29376 864 aa27.49■■□□□ 1.99
SSR4P1-202ENST00000429427 HFM1A2PYH4 1435 aa27.49■■□□□ 1.99
SSR4P1-202ENST00000429427 IQGAP1P46940 1657 aa27.48■■□□□ 1.99
SSR4P1-202ENST00000429427 ADGRB3O60242 1522 aa27.47■■□□□ 1.99
SSR4P1-202ENST00000429427 SCAF11Q99590 1463 aaKnown RBP27.47■■□□□ 1.99
SSR4P1-202ENST00000429427 TMEM2Q9UHN6 1383 aa27.47■■□□□ 1.99
SSR4P1-202ENST00000429427 SLC52A1Q9NWF4 448 aa27.44■■□□□ 1.98
SSR4P1-202ENST00000429427 IQSEC2Q5JU85 1478 aa27.4■■□□□ 1.98
SSR4P1-202ENST00000429427 TXNDC2Q86VQ3 553 aa27.4■■□□□ 1.98
SSR4P1-202ENST00000429427 TMEM131LA2VDJ0 1609 aa27.38■■□□□ 1.97
SSR4P1-202ENST00000429427 STAG3Q9UJ98 1225 aa27.38■■□□□ 1.97
SSR4P1-202ENST00000429427 MYO5BQ9ULV0 1848 aa27.36■■□□□ 1.97
SSR4P1-202ENST00000429427 STRCP1A6NGW2 1772 aa27.35■■□□□ 1.97
SSR4P1-202ENST00000429427 ZFYVE9O95405 1425 aa27.34■■□□□ 1.97
SSR4P1-202ENST00000429427 CPS1P31327 1500 aa27.33■■□□□ 1.97
SSR4P1-202ENST00000429427 EID1Q9Y6B2 187 aa27.32■■□□□ 1.96
SSR4P1-202ENST00000429427 SPHKAPQ2M3C7 1700 aa27.3■■□□□ 1.96
SSR4P1-202ENST00000429427 RIMS2Q9UQ26 1411 aa27.27■■□□□ 1.96
SSR4P1-202ENST00000429427 TRPM2O94759 1503 aa27.24■■□□□ 1.95
SSR4P1-202ENST00000429427 LRRC7Q96NW7 1537 aa27.23■■□□□ 1.95
SSR4P1-202ENST00000429427 TRIM52Q96A61 297 aa27.23■■□□□ 1.95
SSR4P1-202ENST00000429427 CLTCL1P53675 1640 aa27.23■■□□□ 1.95
SSR4P1-202ENST00000429427 CHGAP10645 457 aaKnown RBP27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms