RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 C11orf95C9JLR9 678 aaPredicted RBP18.96■□□□□ 0.63
THBS3-202ENST00000428962 EFCAB2Q5VUJ9 269 aa18.96■□□□□ 0.63
THBS3-202ENST00000428962 ARID4BQ4LE39 1312 aaPredicted RBP18.96■□□□□ 0.63
THBS3-202ENST00000428962 MAGI2Q86UL8 1455 aa18.94■□□□□ 0.62
THBS3-202ENST00000428962 ZNF326Q5BKZ1 582 aaKnown RBP18.94■□□□□ 0.62
THBS3-202ENST00000428962 CCDC144AA2RUR9 1427 aa18.93■□□□□ 0.62
THBS3-202ENST00000428962 KIF13AQ9H1H9 1805 aa18.92■□□□□ 0.62
THBS3-202ENST00000428962 DIP2BQ9P265 1576 aa18.91■□□□□ 0.62
THBS3-202ENST00000428962 ASXL2Q76L83 1435 aa18.91■□□□□ 0.62
THBS3-202ENST00000428962 PRKRIP1Q9H875 184 aaPredicted RBP18.9■□□□□ 0.62
THBS3-202ENST00000428962 BCORL1Q5H9F3 1711 aa18.89■□□□□ 0.62
THBS3-202ENST00000428962 ROCK2O75116 1388 aaKnown RBP18.89■□□□□ 0.61
THBS3-202ENST00000428962 WDR7Q9Y4E6 1490 aa18.89■□□□□ 0.61
THBS3-202ENST00000428962 RTEL1-TNFRSF6BF6WH68 1400 aa18.88■□□□□ 0.61
THBS3-202ENST00000428962 CARD11Q9BXL7 1154 aa18.87■□□□□ 0.61
THBS3-202ENST00000428962 ATP10AO60312 1499 aa18.87■□□□□ 0.61
THBS3-202ENST00000428962 NEFLP07196 543 aa18.86■□□□□ 0.61
THBS3-202ENST00000428962 DCAF11Q8TEB1 546 aa18.86■□□□□ 0.61
THBS3-202ENST00000428962 TRAPPC8Q9Y2L5 1435 aa18.85■□□□□ 0.61
THBS3-202ENST00000428962 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
THBS3-202ENST00000428962 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
THBS3-202ENST00000428962 HNRNPUQ00839 825 aaKnown RBP eCLIP18.84■□□□□ 0.61
THBS3-202ENST00000428962 ABCA9Q8IUA7 1624 aa18.84■□□□□ 0.61
THBS3-202ENST00000428962 PLA2R1Q13018 1463 aa18.84■□□□□ 0.61
THBS3-202ENST00000428962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.84■□□□□ 0.61
THBS3-202ENST00000428962 EIF2AK4Q9P2K8 1649 aaKnown RBP18.83■□□□□ 0.61
THBS3-202ENST00000428962 PRAG1Q86YV5 1406 aa18.83■□□□□ 0.61
THBS3-202ENST00000428962 KDM2AQ9Y2K7 1162 aa18.83■□□□□ 0.6
THBS3-202ENST00000428962 LAMC1P11047 1609 aa18.82■□□□□ 0.6
THBS3-202ENST00000428962 SPAG9O60271 1321 aaKnown RBP18.82■□□□□ 0.6
THBS3-202ENST00000428962 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
THBS3-202ENST00000428962 MRS2Q9HD23 443 aa18.8■□□□□ 0.6
THBS3-202ENST00000428962 A2MP01023 1474 aa18.8■□□□□ 0.6
THBS3-202ENST00000428962 GLI2P10070 1586 aa18.8■□□□□ 0.6
THBS3-202ENST00000428962 FANCAO15360 1455 aa18.79■□□□□ 0.6
THBS3-202ENST00000428962 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
THBS3-202ENST00000428962 FKBP8Q14318 412 aa18.79■□□□□ 0.6
THBS3-202ENST00000428962 DEPDC5O75140 1603 aa18.78■□□□□ 0.6
THBS3-202ENST00000428962 GPRASP1Q5JY77 1395 aa18.77■□□□□ 0.59
THBS3-202ENST00000428962 ATP7AQ04656 1500 aa18.77■□□□□ 0.59
THBS3-202ENST00000428962 POLR3GLQ9BT43 218 aa18.75■□□□□ 0.59
THBS3-202ENST00000428962 E9PCH4 1651 aa18.74■□□□□ 0.59
THBS3-202ENST00000428962 PRDM15P57071 1507 aaPredicted RBP18.74■□□□□ 0.59
THBS3-202ENST00000428962 ST20-MTHFSA0A0A6YYL1 179 aa18.74■□□□□ 0.59
THBS3-202ENST00000428962 CCDC184Q52MB2 194 aa18.74■□□□□ 0.59
THBS3-202ENST00000428962 TRPM2O94759 1503 aa18.73■□□□□ 0.59
THBS3-202ENST00000428962 KTN1Q86UP2 1357 aaKnown RBP18.73■□□□□ 0.59
THBS3-202ENST00000428962 ADGRL1O94910 1474 aa18.73■□□□□ 0.59
THBS3-202ENST00000428962 TET3O43151 1660 aa18.72■□□□□ 0.59
THBS3-202ENST00000428962 TSPOAP1O95153 1857 aa18.71■□□□□ 0.59
THBS3-202ENST00000428962 RGL3Q3MIN7 710 aa18.71■□□□□ 0.59
THBS3-202ENST00000428962 AFAP1Q8N556 730 aa18.71■□□□□ 0.59
THBS3-202ENST00000428962 ZBED9Q6R2W3 1325 aa18.71■□□□□ 0.59
THBS3-202ENST00000428962 KANK1Q14678 1352 aa18.71■□□□□ 0.59
THBS3-202ENST00000428962 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
THBS3-202ENST00000428962 FAM9BQ8IZU0 186 aa18.7■□□□□ 0.58
THBS3-202ENST00000428962 RNF17Q9BXT8 1623 aaKnown RBP18.7■□□□□ 0.58
THBS3-202ENST00000428962 CEP152O94986 1710 aa18.69■□□□□ 0.58
THBS3-202ENST00000428962 VWDEQ8N2E2 1590 aa18.69■□□□□ 0.58
THBS3-202ENST00000428962 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
THBS3-202ENST00000428962 SCAPERQ9BY12 1400 aa18.68■□□□□ 0.58
THBS3-202ENST00000428962 PTPRTO14522 1441 aa18.68■□□□□ 0.58
THBS3-202ENST00000428962 MAP3K4Q9Y6R4 1608 aa18.67■□□□□ 0.58
THBS3-202ENST00000428962 STAC3Q96MF2 364 aa18.67■□□□□ 0.58
THBS3-202ENST00000428962 COL17A1Q9UMD9 1497 aaPredicted RBP18.66■□□□□ 0.58
THBS3-202ENST00000428962 BCANQ96GW7 911 aa18.65■□□□□ 0.58
THBS3-202ENST00000428962 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
THBS3-202ENST00000428962 MADDQ8WXG6 1647 aa18.65■□□□□ 0.58
THBS3-202ENST00000428962 NEURL4Q96JN8 1562 aa18.65■□□□□ 0.58
THBS3-202ENST00000428962 PPRC1Q5VV67 1664 aaKnown RBP18.64■□□□□ 0.57
THBS3-202ENST00000428962 ZNF518AQ6AHZ1 1483 aa18.64■□□□□ 0.57
THBS3-202ENST00000428962 RALBP1Q15311 655 aa18.63■□□□□ 0.57
THBS3-202ENST00000428962 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
THBS3-202ENST00000428962 NBPF1Q3BBV0 1214 aa18.63■□□□□ 0.57
THBS3-202ENST00000428962 MYT1LQ9UL68 1186 aa18.61■□□□□ 0.57
THBS3-202ENST00000428962 MROH1Q8NDA8 1641 aa18.6■□□□□ 0.57
THBS3-202ENST00000428962 MYBBP1AQ9BQG0 1328 aaKnown RBP18.6■□□□□ 0.57
THBS3-202ENST00000428962 BRD4O60885 1362 aaPredicted RBP18.6■□□□□ 0.57
THBS3-202ENST00000428962 KIDINS220Q9ULH0 1771 aa18.6■□□□□ 0.57
THBS3-202ENST00000428962 ERICH6BQ5W0A0 696 aa18.6■□□□□ 0.57
THBS3-202ENST00000428962 IQGAP1P46940 1657 aa18.58■□□□□ 0.57
THBS3-202ENST00000428962 KIF3BO15066 747 aa18.58■□□□□ 0.56
THBS3-202ENST00000428962 TMF1P82094 1093 aa18.58■□□□□ 0.56
THBS3-202ENST00000428962 TMC1Q8TDI8 760 aa18.58■□□□□ 0.56
THBS3-202ENST00000428962 EFCAB6Q5THR3 1501 aa18.57■□□□□ 0.56
THBS3-202ENST00000428962 LMTK2Q8IWU2 1503 aa18.56■□□□□ 0.56
THBS3-202ENST00000428962 TESK2Q96S53 571 aa18.56■□□□□ 0.56
THBS3-202ENST00000428962 WASHC2CQ9Y4E1 1318 aa18.56■□□□□ 0.56
THBS3-202ENST00000428962 KIAA1210Q9ULL0 1709 aa18.56■□□□□ 0.56
THBS3-202ENST00000428962 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
THBS3-202ENST00000428962 POGZQ7Z3K3 1410 aa18.55■□□□□ 0.56
THBS3-202ENST00000428962 CNGB1Q14028 1251 aaPredicted RBP18.54■□□□□ 0.56
THBS3-202ENST00000428962 PARD3Q8TEW0 1356 aa18.54■□□□□ 0.56
THBS3-202ENST00000428962 PNISRQ8TF01 805 aaKnown RBP18.53■□□□□ 0.56
THBS3-202ENST00000428962 SMG6Q86US8 1419 aaKnown RBP18.53■□□□□ 0.56
THBS3-202ENST00000428962 SCAF11Q99590 1463 aaKnown RBP18.53■□□□□ 0.56
THBS3-202ENST00000428962 TSHZ2Q9NRE2 1034 aa18.53■□□□□ 0.56
THBS3-202ENST00000428962 HECW2Q9P2P5 1572 aa18.53■□□□□ 0.56
THBS3-202ENST00000428962 MYOM2P54296 1465 aa18.52■□□□□ 0.56
THBS3-202ENST00000428962 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms