RNA–Protein interactions for RNA: ENST00000428939.3

HOTAIRM1-202, Transcript of HOXA transcript antisense RNA, myeloid-specific 1, humanhuman

TSL 2 BASIC

Gene HOTAIRM1, Length 889 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOTAIRM1-202ENST00000428939 SLC4A1APQ9BWU0 796 aaKnown RBP17.66■□□□□ 0.42
HOTAIRM1-202ENST00000428939 NUP155O75694 1391 aa17.66■□□□□ 0.42
HOTAIRM1-202ENST00000428939 DHX29Q7Z478 1369 aaKnown RBP17.65■□□□□ 0.42
HOTAIRM1-202ENST00000428939 KIDINS220Q9ULH0 1771 aa17.63■□□□□ 0.41
HOTAIRM1-202ENST00000428939 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
HOTAIRM1-202ENST00000428939 A2MP01023 1474 aa17.63■□□□□ 0.41
HOTAIRM1-202ENST00000428939 PZPP20742 1482 aa17.63■□□□□ 0.41
HOTAIRM1-202ENST00000428939 RICTORQ6R327 1708 aa17.62■□□□□ 0.41
HOTAIRM1-202ENST00000428939 ZMYM4Q5VZL5 1548 aa17.62■□□□□ 0.41
HOTAIRM1-202ENST00000428939 FRMPD1Q5SYB0 1578 aa17.62■□□□□ 0.41
HOTAIRM1-202ENST00000428939 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.6■□□□□ 0.41
HOTAIRM1-202ENST00000428939 MAGI2Q86UL8 1455 aa17.6■□□□□ 0.41
HOTAIRM1-202ENST00000428939 UNC13BO14795 1591 aa17.6■□□□□ 0.41
HOTAIRM1-202ENST00000428939 KIF3BO15066 747 aa17.58■□□□□ 0.4
HOTAIRM1-202ENST00000428939 PKD2Q13563 968 aa17.57■□□□□ 0.4
HOTAIRM1-202ENST00000428939 ABCA6Q8N139 1617 aa17.57■□□□□ 0.4
HOTAIRM1-202ENST00000428939 EIF2AK4Q9P2K8 1649 aaKnown RBP17.57■□□□□ 0.4
HOTAIRM1-202ENST00000428939 YEATS2Q9ULM3 1422 aa17.56■□□□□ 0.4
HOTAIRM1-202ENST00000428939 DIP2CQ9Y2E4 1556 aa17.56■□□□□ 0.4
HOTAIRM1-202ENST00000428939 FAM135AQ9P2D6 1515 aa17.56■□□□□ 0.4
HOTAIRM1-202ENST00000428939 COL17A1Q9UMD9 1497 aaPredicted RBP17.56■□□□□ 0.4
HOTAIRM1-202ENST00000428939 KANK1Q14678 1352 aa17.55■□□□□ 0.4
HOTAIRM1-202ENST00000428939 NEUROD1Q13562 356 aa17.55■□□□□ 0.4
HOTAIRM1-202ENST00000428939 SIN3AQ96ST3 1273 aa17.55■□□□□ 0.4
HOTAIRM1-202ENST00000428939 ANKRD30BQ9BXX2 1392 aa17.52■□□□□ 0.39
HOTAIRM1-202ENST00000428939 ATP10AO60312 1499 aa17.51■□□□□ 0.39
HOTAIRM1-202ENST00000428939 IQGAP3Q86VI3 1631 aa17.51■□□□□ 0.39
HOTAIRM1-202ENST00000428939 TIMELESSQ9UNS1 1208 aa17.51■□□□□ 0.39
HOTAIRM1-202ENST00000428939 DEPDC5O75140 1603 aa17.5■□□□□ 0.39
HOTAIRM1-202ENST00000428939 PRDM15P57071 1507 aaPredicted RBP17.49■□□□□ 0.39
HOTAIRM1-202ENST00000428939 TONSLQ96HA7 1378 aa17.48■□□□□ 0.39
HOTAIRM1-202ENST00000428939 GGT6Q6P531 493 aa17.47■□□□□ 0.39
HOTAIRM1-202ENST00000428939 RNF17Q9BXT8 1623 aaKnown RBP17.47■□□□□ 0.39
HOTAIRM1-202ENST00000428939 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
HOTAIRM1-202ENST00000428939 VWDEQ8N2E2 1590 aa17.46■□□□□ 0.39
HOTAIRM1-202ENST00000428939 REREQ9P2R6 1566 aa17.46■□□□□ 0.39
HOTAIRM1-202ENST00000428939 MROH1Q8NDA8 1641 aa17.46■□□□□ 0.39
HOTAIRM1-202ENST00000428939 BCORL1Q5H9F3 1711 aa17.45■□□□□ 0.38
HOTAIRM1-202ENST00000428939 AGLP35573 1532 aa17.43■□□□□ 0.38
HOTAIRM1-202ENST00000428939 RPRD2Q5VT52 1461 aaKnown RBP17.43■□□□□ 0.38
HOTAIRM1-202ENST00000428939 LMTK2Q8IWU2 1503 aa17.42■□□□□ 0.38
HOTAIRM1-202ENST00000428939 WASHC2CQ9Y4E1 1318 aa17.41■□□□□ 0.38
HOTAIRM1-202ENST00000428939 TET3O43151 1660 aa17.4■□□□□ 0.38
HOTAIRM1-202ENST00000428939 CCDC144AA2RUR9 1427 aa17.38■□□□□ 0.37
HOTAIRM1-202ENST00000428939 ABCC3O15438 1527 aa17.37■□□□□ 0.37
HOTAIRM1-202ENST00000428939 EFCAB6Q5THR3 1501 aa17.37■□□□□ 0.37
HOTAIRM1-202ENST00000428939 PLA2R1Q13018 1463 aa17.36■□□□□ 0.37
HOTAIRM1-202ENST00000428939 PPP1R15AO75807 674 aaPredicted RBP17.35■□□□□ 0.37
HOTAIRM1-202ENST00000428939 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
HOTAIRM1-202ENST00000428939 E9PCH4 1651 aa17.34■□□□□ 0.37
HOTAIRM1-202ENST00000428939 PTPRTO14522 1441 aa17.34■□□□□ 0.37
HOTAIRM1-202ENST00000428939 ARID4BQ4LE39 1312 aaPredicted RBP17.34■□□□□ 0.37
HOTAIRM1-202ENST00000428939 L3MBTL2Q969R5 705 aa17.33■□□□□ 0.36
HOTAIRM1-202ENST00000428939 ZC3H13Q5T200 1668 aaKnown RBP17.32■□□□□ 0.36
HOTAIRM1-202ENST00000428939 TRPM2O94759 1503 aa17.32■□□□□ 0.36
HOTAIRM1-202ENST00000428939 NPATQ14207 1427 aa17.32■□□□□ 0.36
HOTAIRM1-202ENST00000428939 MLECQ14165 292 aa17.32■□□□□ 0.36
HOTAIRM1-202ENST00000428939 CEP152O94986 1710 aa17.32■□□□□ 0.36
HOTAIRM1-202ENST00000428939 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
HOTAIRM1-202ENST00000428939 ESF1Q9H501 851 aaKnown RBP17.29■□□□□ 0.36
HOTAIRM1-202ENST00000428939 CAMSAP1Q5T5Y3 1602 aa17.29■□□□□ 0.36
HOTAIRM1-202ENST00000428939 CNTLNQ9NXG0 1405 aa17.28■□□□□ 0.36
HOTAIRM1-202ENST00000428939 SIGLEC1Q9BZZ2 1709 aa17.27■□□□□ 0.36
HOTAIRM1-202ENST00000428939 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.35
HOTAIRM1-202ENST00000428939 NOS1P29475 1434 aa17.24■□□□□ 0.35
HOTAIRM1-202ENST00000428939 RGL3Q3MIN7 710 aa17.23■□□□□ 0.35
HOTAIRM1-202ENST00000428939 CLTCL1P53675 1640 aa17.22■□□□□ 0.35
HOTAIRM1-202ENST00000428939 SPATA31E1Q6ZUB1 1445 aa17.21■□□□□ 0.35
HOTAIRM1-202ENST00000428939 DCAF11Q8TEB1 546 aa17.21■□□□□ 0.35
HOTAIRM1-202ENST00000428939 ZNF316A6NFI3 1004 aaPredicted RBP17.2■□□□□ 0.34
HOTAIRM1-202ENST00000428939 KDM2AQ9Y2K7 1162 aa17.19■□□□□ 0.34
HOTAIRM1-202ENST00000428939 CLTCQ00610 1675 aaKnown RBP17.19■□□□□ 0.34
HOTAIRM1-202ENST00000428939 UGGT1Q9NYU2 1555 aa17.19■□□□□ 0.34
HOTAIRM1-202ENST00000428939 ERVK-7P63135 1459 aa17.18■□□□□ 0.34
HOTAIRM1-202ENST00000428939 ZMYM3Q14202 1370 aa17.18■□□□□ 0.34
HOTAIRM1-202ENST00000428939 NBPF8Q3BBV2 869 aa17.18■□□□□ 0.34
HOTAIRM1-202ENST00000428939 ZNF326Q5BKZ1 582 aaKnown RBP17.18■□□□□ 0.34
HOTAIRM1-202ENST00000428939 SLC52A1Q9NWF4 448 aa17.18■□□□□ 0.34
HOTAIRM1-202ENST00000428939 UHRF1BP1Q6BDS2 1440 aa17.18■□□□□ 0.34
HOTAIRM1-202ENST00000428939 CHGAP10645 457 aaKnown RBP17.17■□□□□ 0.34
HOTAIRM1-202ENST00000428939 HOXD11P31277 338 aaPredicted RBP17.17■□□□□ 0.34
HOTAIRM1-202ENST00000428939 NEURL4Q96JN8 1562 aa17.17■□□□□ 0.34
HOTAIRM1-202ENST00000428939 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
HOTAIRM1-202ENST00000428939 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
HOTAIRM1-202ENST00000428939 STAC3Q96MF2 364 aa17.16■□□□□ 0.34
HOTAIRM1-202ENST00000428939 SYNMO15061 1565 aa17.15■□□□□ 0.34
HOTAIRM1-202ENST00000428939 PREX1Q8TCU6 1659 aa17.14■□□□□ 0.33
HOTAIRM1-202ENST00000428939 ADGRB3O60242 1522 aa17.13■□□□□ 0.33
HOTAIRM1-202ENST00000428939 IDI1Q13907 227 aa17.13■□□□□ 0.33
HOTAIRM1-202ENST00000428939 NCBP3Q53F19 620 aaKnown RBP17.13■□□□□ 0.33
HOTAIRM1-202ENST00000428939 SPATA31D1Q6ZQQ2 1576 aa17.13■□□□□ 0.33
HOTAIRM1-202ENST00000428939 RNF216Q9NWF9 866 aaPredicted RBP17.12■□□□□ 0.33
HOTAIRM1-202ENST00000428939 PRAG1Q86YV5 1406 aa17.12■□□□□ 0.33
HOTAIRM1-202ENST00000428939 PIK3C2BO00750 1634 aa17.11■□□□□ 0.33
HOTAIRM1-202ENST00000428939 RPGRIP1LQ68CZ1 1315 aa17.1■□□□□ 0.33
HOTAIRM1-202ENST00000428939 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
HOTAIRM1-202ENST00000428939 MROH2AA6NES4 1674 aa17.1■□□□□ 0.33
HOTAIRM1-202ENST00000428939 TNRQ92752 1358 aa17.09■□□□□ 0.33
HOTAIRM1-202ENST00000428939 KIF1BO60333 1816 aa17.09■□□□□ 0.33
HOTAIRM1-202ENST00000428939 STAG3Q9UJ98 1225 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms