RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 FYCO1Q9BQS8 1478 aa19.14■□□□□ 0.65
ALMS1P1-201ENST00000428767 STRCP1A6NGW2 1772 aa19.14■□□□□ 0.65
ALMS1P1-201ENST00000428767 KIAA1107Q9UPP5 1409 aa19.13■□□□□ 0.65
ALMS1P1-201ENST00000428767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.11■□□□□ 0.65
ALMS1P1-201ENST00000428767 FBXO31Q5XUX0 539 aaPredicted RBP19.11■□□□□ 0.65
ALMS1P1-201ENST00000428767 CFDP1Q9UEE9 299 aaPredicted RBP19.11■□□□□ 0.65
ALMS1P1-201ENST00000428767 IQGAP1P46940 1657 aa19.11■□□□□ 0.65
ALMS1P1-201ENST00000428767 RNF17Q9BXT8 1623 aaKnown RBP19.09■□□□□ 0.65
ALMS1P1-201ENST00000428767 PZPP20742 1482 aa19.09■□□□□ 0.65
ALMS1P1-201ENST00000428767 NPHP4O75161 1426 aaPredicted RBP19.08■□□□□ 0.65
ALMS1P1-201ENST00000428767 CCNB3Q8WWL7 1395 aa19.08■□□□□ 0.65
ALMS1P1-201ENST00000428767 DEPDC5O75140 1603 aa19.07■□□□□ 0.64
ALMS1P1-201ENST00000428767 KDM5DQ9BY66 1539 aa19.07■□□□□ 0.64
ALMS1P1-201ENST00000428767 ANKLE2Q86XL3 938 aa19.07■□□□□ 0.64
ALMS1P1-201ENST00000428767 UGGT1Q9NYU2 1555 aa19.06■□□□□ 0.64
ALMS1P1-201ENST00000428767 SYNMO15061 1565 aa19.06■□□□□ 0.64
ALMS1P1-201ENST00000428767 LRRC7Q96NW7 1537 aa19.05■□□□□ 0.64
ALMS1P1-201ENST00000428767 ZNF644Q9H582 1327 aaPredicted RBP19.04■□□□□ 0.64
ALMS1P1-201ENST00000428767 TIAM1Q13009 1591 aa19.04■□□□□ 0.64
ALMS1P1-201ENST00000428767 MED14O60244 1454 aa19.03■□□□□ 0.64
ALMS1P1-201ENST00000428767 FAM135AQ9P2D6 1515 aa19.03■□□□□ 0.64
ALMS1P1-201ENST00000428767 KIF3BO15066 747 aa19.02■□□□□ 0.64
ALMS1P1-201ENST00000428767 DHX29Q7Z478 1369 aaKnown RBP19.02■□□□□ 0.64
ALMS1P1-201ENST00000428767 NLRP1Q9C000 1473 aa19.02■□□□□ 0.63
ALMS1P1-201ENST00000428767 THEMISQ8N1K5 641 aaPredicted RBP19.01■□□□□ 0.63
ALMS1P1-201ENST00000428767 RGS17Q9UGC6 210 aaPredicted RBP19.01■□□□□ 0.63
ALMS1P1-201ENST00000428767 MBD5Q9P267 1494 aa19.01■□□□□ 0.63
ALMS1P1-201ENST00000428767 MIA2Q96PC5 1412 aa19■□□□□ 0.63
ALMS1P1-201ENST00000428767 MTUS2Q5JR59 1369 aa18.99■□□□□ 0.63
ALMS1P1-201ENST00000428767 RTEL1-TNFRSF6BF6WH68 1400 aa18.99■□□□□ 0.63
ALMS1P1-201ENST00000428767 ZC3H13Q5T200 1668 aaKnown RBP18.98■□□□□ 0.63
ALMS1P1-201ENST00000428767 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
ALMS1P1-201ENST00000428767 CFAP65Q6ZU64 1925 aaKnown RBP18.98■□□□□ 0.63
ALMS1P1-201ENST00000428767 WASHC2CQ9Y4E1 1318 aa18.98■□□□□ 0.63
ALMS1P1-201ENST00000428767 SETD1AO15047 1707 aaKnown RBP18.97■□□□□ 0.63
ALMS1P1-201ENST00000428767 CCDC141Q6ZP82 1450 aa18.93■□□□□ 0.62
ALMS1P1-201ENST00000428767 EHBP1L1Q8N3D4 1523 aa18.93■□□□□ 0.62
ALMS1P1-201ENST00000428767 CHIC1Q5VXU3 224 aa18.92■□□□□ 0.62
ALMS1P1-201ENST00000428767 UBR1Q8IWV7 1749 aa18.91■□□□□ 0.62
ALMS1P1-201ENST00000428767 POTEAQ6S8J7 498 aa18.9■□□□□ 0.62
ALMS1P1-201ENST00000428767 CEP152O94986 1710 aa18.89■□□□□ 0.61
ALMS1P1-201ENST00000428767 CAMSAP2Q08AD1 1489 aa18.89■□□□□ 0.61
ALMS1P1-201ENST00000428767 ABCC3O15438 1527 aa18.88■□□□□ 0.61
ALMS1P1-201ENST00000428767 ERVK-7P63135 1459 aa18.87■□□□□ 0.61
ALMS1P1-201ENST00000428767 SCAF11Q99590 1463 aaKnown RBP18.86■□□□□ 0.61
ALMS1P1-201ENST00000428767 CEP162Q5TB80 1403 aa18.84■□□□□ 0.61
ALMS1P1-201ENST00000428767 ROBO1Q9Y6N7 1651 aa18.84■□□□□ 0.61
ALMS1P1-201ENST00000428767 NCOA2Q15596 1464 aa18.82■□□□□ 0.6
ALMS1P1-201ENST00000428767 ARHGEF5Q12774 1597 aa18.81■□□□□ 0.6
ALMS1P1-201ENST00000428767 MROH1Q8NDA8 1641 aa18.8■□□□□ 0.6
ALMS1P1-201ENST00000428767 LTKP29376 864 aa18.79■□□□□ 0.6
ALMS1P1-201ENST00000428767 FAM135BQ49AJ0 1406 aa18.79■□□□□ 0.6
ALMS1P1-201ENST00000428767 EIF2AK4Q9P2K8 1649 aaKnown RBP18.78■□□□□ 0.6
ALMS1P1-201ENST00000428767 ARHGAP23Q9P227 1491 aa18.78■□□□□ 0.6
ALMS1P1-201ENST00000428767 SLIT1O75093 1534 aa18.78■□□□□ 0.6
ALMS1P1-201ENST00000428767 TXNDC2Q86VQ3 553 aa18.77■□□□□ 0.6
ALMS1P1-201ENST00000428767 PHLPP1O60346 1717 aa18.76■□□□□ 0.59
ALMS1P1-201ENST00000428767 PIK3C2BO00750 1634 aa18.75■□□□□ 0.59
ALMS1P1-201ENST00000428767 TMEM94Q12767 1356 aa18.75■□□□□ 0.59
ALMS1P1-201ENST00000428767 TSPY4P0CV99 314 aa18.74■□□□□ 0.59
ALMS1P1-201ENST00000428767 TSPY10P0CW01 314 aa18.74■□□□□ 0.59
ALMS1P1-201ENST00000428767 RSPH4AQ5TD94 716 aa18.74■□□□□ 0.59
ALMS1P1-201ENST00000428767 MAP3K1Q13233 1512 aa18.74■□□□□ 0.59
ALMS1P1-201ENST00000428767 MAST1Q9Y2H9 1570 aa18.73■□□□□ 0.59
ALMS1P1-201ENST00000428767 RBM33Q96EV2 1170 aaKnown RBP18.73■□□□□ 0.59
ALMS1P1-201ENST00000428767 EID1Q9Y6B2 187 aa18.71■□□□□ 0.59
ALMS1P1-201ENST00000428767 LRRC9Q6ZRR7 1453 aa18.69■□□□□ 0.58
ALMS1P1-201ENST00000428767 PROSER2Q86WR7 435 aaPredicted RBP18.66■□□□□ 0.58
ALMS1P1-201ENST00000428767 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
ALMS1P1-201ENST00000428767 PRDM15P57071 1507 aaPredicted RBP18.64■□□□□ 0.58
ALMS1P1-201ENST00000428767 SLC26A8Q96RN1 970 aa18.64■□□□□ 0.57
ALMS1P1-201ENST00000428767 STAG3Q9UJ98 1225 aa18.64■□□□□ 0.57
ALMS1P1-201ENST00000428767 JCADQ9P266 1359 aa18.64■□□□□ 0.57
ALMS1P1-201ENST00000428767 EFCAB6Q5THR3 1501 aa18.64■□□□□ 0.57
ALMS1P1-201ENST00000428767 DUOX2Q9NRD8 1548 aa18.64■□□□□ 0.57
ALMS1P1-201ENST00000428767 NWD1Q149M9 1564 aa18.64■□□□□ 0.57
ALMS1P1-201ENST00000428767 COL16A1Q07092 1604 aaPredicted RBP18.63■□□□□ 0.57
ALMS1P1-201ENST00000428767 KCNA6P17658 529 aa18.63■□□□□ 0.57
ALMS1P1-201ENST00000428767 UPF1Q92900 1129 aaKnown RBP eCLIP18.63■□□□□ 0.57
ALMS1P1-201ENST00000428767 TRIM52Q96A61 297 aa18.63■□□□□ 0.57
ALMS1P1-201ENST00000428767 ARHGAP31Q2M1Z3 1444 aa18.62■□□□□ 0.57
ALMS1P1-201ENST00000428767 NKTRP30414 1462 aaKnown RBP18.62■□□□□ 0.57
ALMS1P1-201ENST00000428767 LRP6O75581 1613 aa18.62■□□□□ 0.57
ALMS1P1-201ENST00000428767 TET3O43151 1660 aa18.62■□□□□ 0.57
ALMS1P1-201ENST00000428767 KDM5AP29375 1690 aaKnown RBP18.62■□□□□ 0.57
ALMS1P1-201ENST00000428767 MSH6P52701 1360 aa18.61■□□□□ 0.57
ALMS1P1-201ENST00000428767 CROCC2H7BZ55 1655 aa18.58■□□□□ 0.57
ALMS1P1-201ENST00000428767 MEX3CQ5U5Q3 659 aaKnown RBP18.58■□□□□ 0.56
ALMS1P1-201ENST00000428767 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.58■□□□□ 0.56
ALMS1P1-201ENST00000428767 SRCAPQ6ZRS2 3230 aa18.58■□□□□ 0.56
ALMS1P1-201ENST00000428767 SLAIN2Q9P270 581 aa18.57■□□□□ 0.56
ALMS1P1-201ENST00000428767 MYO5BQ9ULV0 1848 aa18.57■□□□□ 0.56
ALMS1P1-201ENST00000428767 CHD2O14647 1828 aaKnown RBP18.56■□□□□ 0.56
ALMS1P1-201ENST00000428767 ADGRB3O60242 1522 aa18.56■□□□□ 0.56
ALMS1P1-201ENST00000428767 KIF15Q9NS87 1388 aa18.55■□□□□ 0.56
ALMS1P1-201ENST00000428767 SHPRHQ149N8 1683 aa18.55■□□□□ 0.56
ALMS1P1-201ENST00000428767 BCANQ96GW7 911 aa18.55■□□□□ 0.56
ALMS1P1-201ENST00000428767 IDI1Q13907 227 aa18.53■□□□□ 0.56
ALMS1P1-201ENST00000428767 ZNF772Q68DY9 489 aaPredicted RBP18.53■□□□□ 0.56
ALMS1P1-201ENST00000428767 ERBINQ96RT1 1412 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms