RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 MIA2Q96PC5 1412 aa16.09■□□□□ 0.17
ZNF3-208ENST00000428683 PKD2Q13563 968 aa16.08■□□□□ 0.16
ZNF3-208ENST00000428683 TNRQ92752 1358 aa16.06■□□□□ 0.16
ZNF3-208ENST00000428683 RRP7BPQ9NSQ0 103 aa16.06■□□□□ 0.16
ZNF3-208ENST00000428683 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
ZNF3-208ENST00000428683 CHIC2Q9UKJ5 165 aa16.04■□□□□ 0.16
ZNF3-208ENST00000428683 MYO3AQ8NEV4 1616 aa16.04■□□□□ 0.16
ZNF3-208ENST00000428683 CEP170BQ9Y4F5 1589 aaPredicted RBP16.04■□□□□ 0.16
ZNF3-208ENST00000428683 KDM5DQ9BY66 1539 aa16.03■□□□□ 0.16
ZNF3-208ENST00000428683 A2ML1A8K2U0 1454 aa16.03■□□□□ 0.16
ZNF3-208ENST00000428683 PZPP20742 1482 aa16.02■□□□□ 0.15
ZNF3-208ENST00000428683 ABCC5O15440 1437 aa16.02■□□□□ 0.15
ZNF3-208ENST00000428683 THEMISQ8N1K5 641 aaPredicted RBP16.01■□□□□ 0.15
ZNF3-208ENST00000428683 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.154e-11■□□□□ 11.1
ZNF3-208ENST00000428683 PLA2R1Q13018 1463 aa16.01■□□□□ 0.15
ZNF3-208ENST00000428683 LTBP4Q8N2S1 1624 aa16.01■□□□□ 0.15
ZNF3-208ENST00000428683 MAST1Q9Y2H9 1570 aa16■□□□□ 0.15
ZNF3-208ENST00000428683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16■□□□□ 0.15
ZNF3-208ENST00000428683 TCOF1Q13428 1488 aaKnown RBP15.99■□□□□ 0.15
ZNF3-208ENST00000428683 ANKLE2Q86XL3 938 aa15.99■□□□□ 0.15
ZNF3-208ENST00000428683 KIF15Q9NS87 1388 aa15.99■□□□□ 0.15
ZNF3-208ENST00000428683 DNMT1P26358 1616 aaKnown RBP15.98■□□□□ 0.15
ZNF3-208ENST00000428683 FGD6Q6ZV73 1430 aa15.97■□□□□ 0.15
ZNF3-208ENST00000428683 FAM50AQ14320 339 aaKnown RBP15.97■□□□□ 0.15
ZNF3-208ENST00000428683 ZNF142P52746 1687 aaPredicted RBP15.97■□□□□ 0.15
ZNF3-208ENST00000428683 FAM135AQ9P2D6 1515 aa15.96■□□□□ 0.15
ZNF3-208ENST00000428683 PTPN23Q9H3S7 1636 aa15.96■□□□□ 0.15
ZNF3-208ENST00000428683 DAPK1P53355 1430 aa15.95■□□□□ 0.14
ZNF3-208ENST00000428683 ABCC3O15438 1527 aa15.95■□□□□ 0.14
ZNF3-208ENST00000428683 DUOX2Q9NRD8 1548 aa15.95■□□□□ 0.14
ZNF3-208ENST00000428683 UBAP1LF5GYI3 381 aa15.95■□□□□ 0.14
ZNF3-208ENST00000428683 NLRP1Q9C000 1473 aa15.93■□□□□ 0.14
ZNF3-208ENST00000428683 UGGT1Q9NYU2 1555 aa15.92■□□□□ 0.14
ZNF3-208ENST00000428683 ANKRD30AQ9BXX3 1397 aa15.92■□□□□ 0.14
ZNF3-208ENST00000428683 RNF17Q9BXT8 1623 aaKnown RBP15.92■□□□□ 0.14
ZNF3-208ENST00000428683 SHANK2Q9UPX8 1470 aa15.91■□□□□ 0.14
ZNF3-208ENST00000428683 EIF2AK4Q9P2K8 1649 aaKnown RBP15.9■□□□□ 0.14
ZNF3-208ENST00000428683 PPARGC1BQ86YN6 1023 aaKnown RBP15.9■□□□□ 0.14
ZNF3-208ENST00000428683 ERBINQ96RT1 1412 aa15.9■□□□□ 0.14
ZNF3-208ENST00000428683 ERVK-7P63135 1459 aa15.9■□□□□ 0.14
ZNF3-208ENST00000428683 MROH1Q8NDA8 1641 aa15.9■□□□□ 0.14
ZNF3-208ENST00000428683 KANK1Q14678 1352 aa15.89■□□□□ 0.13
ZNF3-208ENST00000428683 IQSEC2Q5JU85 1478 aa15.89■□□□□ 0.13
ZNF3-208ENST00000428683 NPHP4O75161 1426 aaPredicted RBP15.88■□□□□ 0.13
ZNF3-208ENST00000428683 SPATA31D1Q6ZQQ2 1576 aa15.87■□□□□ 0.13
ZNF3-208ENST00000428683 STAG3Q9UJ98 1225 aa15.87■□□□□ 0.13
ZNF3-208ENST00000428683 SCAF1Q9H7N4 1312 aaKnown RBP15.87■□□□□ 0.13
ZNF3-208ENST00000428683 NEURL4Q96JN8 1562 aa15.87■□□□□ 0.13
ZNF3-208ENST00000428683 CEP152O94986 1710 aa15.86■□□□□ 0.13
ZNF3-208ENST00000428683 TXNDC2Q86VQ3 553 aa15.86■□□□□ 0.13
ZNF3-208ENST00000428683 CFAP65Q6ZU64 1925 aaKnown RBP15.86■□□□□ 0.13
ZNF3-208ENST00000428683 DISP3Q9P2K9 1392 aa15.86■□□□□ 0.13
ZNF3-208ENST00000428683 ZC3H13Q5T200 1668 aaKnown RBP15.86■□□□□ 0.13
ZNF3-208ENST00000428683 LTKP29376 864 aa15.85■□□□□ 0.13
ZNF3-208ENST00000428683 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
ZNF3-208ENST00000428683 ARHGAP31Q2M1Z3 1444 aa15.85■□□□□ 0.13
ZNF3-208ENST00000428683 CROCC2H7BZ55 1655 aa15.84■□□□□ 0.13
ZNF3-208ENST00000428683 IDI1Q13907 227 aa15.84■□□□□ 0.13
ZNF3-208ENST00000428683 TOM1O60784 492 aa15.83■□□□□ 0.12
ZNF3-208ENST00000428683 ITGAEP38570 1179 aa15.83■□□□□ 0.12
ZNF3-208ENST00000428683 MED14O60244 1454 aa15.83■□□□□ 0.12
ZNF3-208ENST00000428683 EID1Q9Y6B2 187 aa15.82■□□□□ 0.12
ZNF3-208ENST00000428683 PRDM15P57071 1507 aaPredicted RBP15.82■□□□□ 0.12
ZNF3-208ENST00000428683 POLR1AO95602 1720 aaPredicted RBP15.81■□□□□ 0.12
ZNF3-208ENST00000428683 CPS1P31327 1500 aa15.79■□□□□ 0.12
ZNF3-208ENST00000428683 ANKRD50Q9ULJ7 1429 aa15.79■□□□□ 0.12
ZNF3-208ENST00000428683 ADGRL2O95490 1459 aa15.78■□□□□ 0.12
ZNF3-208ENST00000428683 ILDR2Q71H61 639 aa15.78■□□□□ 0.12
ZNF3-208ENST00000428683 DEPDC5O75140 1603 aa15.78■□□□□ 0.12
ZNF3-208ENST00000428683 VWDEQ8N2E2 1590 aa15.78■□□□□ 0.12
ZNF3-208ENST00000428683 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
ZNF3-208ENST00000428683 HSPA1LP34931 641 aa15.77■□□□□ 0.12
ZNF3-208ENST00000428683 SENP3Q9H4L4 574 aaPredicted RBP15.77■□□□□ 0.12
ZNF3-208ENST00000428683 LMTK2Q8IWU2 1503 aa15.76■□□□□ 0.11
ZNF3-208ENST00000428683 UBR1Q8IWV7 1749 aa15.76■□□□□ 0.11
ZNF3-208ENST00000428683 TMEM2Q9UHN6 1383 aa15.75■□□□□ 0.11
ZNF3-208ENST00000428683 BCANQ96GW7 911 aa15.75■□□□□ 0.11
ZNF3-208ENST00000428683 SLC52A1Q9NWF4 448 aa15.75■□□□□ 0.11
ZNF3-208ENST00000428683 ARHGAP23Q9P227 1491 aa15.75■□□□□ 0.11
ZNF3-208ENST00000428683 IQGAP1P46940 1657 aa15.75■□□□□ 0.11
ZNF3-208ENST00000428683 SLC26A8Q96RN1 970 aa15.74■□□□□ 0.11
ZNF3-208ENST00000428683 PIK3C2BO00750 1634 aa15.73■□□□□ 0.11
ZNF3-208ENST00000428683 NOS1P29475 1434 aa15.73■□□□□ 0.11
ZNF3-208ENST00000428683 SLIT1O75093 1534 aa15.73■□□□□ 0.11
ZNF3-208ENST00000428683 CHGAP10645 457 aaKnown RBP15.72■□□□□ 0.11
ZNF3-208ENST00000428683 LRRC7Q96NW7 1537 aa15.72■□□□□ 0.11
ZNF3-208ENST00000428683 EFCAB6Q5THR3 1501 aa15.7■□□□□ 0.1
ZNF3-208ENST00000428683 SYNMO15061 1565 aa15.7■□□□□ 0.1
ZNF3-208ENST00000428683 RBM33Q96EV2 1170 aaKnown RBP15.69■□□□□ 0.1
ZNF3-208ENST00000428683 STRCP1A6NGW2 1772 aa15.68■□□□□ 0.1
ZNF3-208ENST00000428683 NUP155O75694 1391 aa15.68■□□□□ 0.1
ZNF3-208ENST00000428683 ROCK1Q13464 1354 aa15.68■□□□□ 0.1
ZNF3-208ENST00000428683 PPP1R15AO75807 674 aaPredicted RBP15.67■□□□□ 0.1
ZNF3-208ENST00000428683 KCNA6P17658 529 aa15.67■□□□□ 0.1
ZNF3-208ENST00000428683 NUTM2DQ5VT03 806 aaPredicted RBP15.67■□□□□ 0.1
ZNF3-208ENST00000428683 PROSER2Q86WR7 435 aaPredicted RBP15.67■□□□□ 0.1
ZNF3-208ENST00000428683 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
ZNF3-208ENST00000428683 RPRD2Q5VT52 1461 aaKnown RBP15.65■□□□□ 0.1
ZNF3-208ENST00000428683 ALKQ9UM73 1620 aa15.63■□□□□ 0.09
ZNF3-208ENST00000428683 ADGRB3O60242 1522 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms